Suncheng Xiang

Dan You, Pengcheng Xia, Qiuzhu Chen et al.

Automated chromosome instance segmentation from metaphase cell microscopic images is critical for the diagnosis of chromosomal disorders (i.e., karyotype analysis). However, it is still a challenging task due to lacking of densely annotated datasets and the complicated morphologies of chromosomes, e.g., dense distribution, arbitrary orientations, and wide range of lengths. To facilitate the development of this area, we take a big step forward and manually construct a large-scale densely annotated dataset named AutoKary2022, which contains over 27,000 chromosome instances in 612 microscopic images from 50 patients. Specifically, each instance is annotated with a polygonal mask and a class label to assist in precise chromosome detection and segmentation. On top of it, we systematically investigate representative methods on this dataset and obtain a number of interesting findings, which helps us have a deeper understanding of the fundamental problems in chromosome instance segmentation. We hope this dataset could advance research towards medical understanding. The dataset can be available at: https://github.com/wangjuncongyu/chromosome-instance-segmentation-dataset.

Jiacheng Ruan, Suncheng Xiang, Mingye Xie et al.

Recently, some pioneering works have preferred applying more complex modules to improve segmentation performances. However, it is not friendly for actual clinical environments due to limited computing resources. To address this challenge, we propose a light-weight model to achieve competitive performances for skin lesion segmentation at the lowest cost of parameters and computational complexity so far. Briefly, we propose four modules: (1) DGA consists of dilated convolution and gated attention mechanisms to extract global and local feature information; (2) IEA, which is based on external attention to characterize the overall datasets and enhance the connection between samples; (3) CAB is composed of 1D convolution and fully connected layers to perform a global and local fusion of multi-stage features to generate attention maps at channel axis; (4) SAB, which operates on multi-stage features by a shared 2D convolution to generate attention maps at spatial axis. We combine four modules with our U-shape architecture and obtain a light-weight medical image segmentation model dubbed as MALUNet. Compared with UNet, our model improves the mIoU and DSC metrics by 2.39% and 1.49%, respectively, with a 44x and 166x reduction in the number of parameters and computational complexity. In addition, we conduct comparison experiments on two skin lesion segmentation datasets (ISIC2017 and ISIC2018). Experimental results show that our model achieves state-of-the-art in balancing the number of parameters, computational complexity and segmentation performances. Code is available at https://github.com/JCruan519/MALUNet.

Jiacheng Ruan, Mingye Xie, Suncheng Xiang et al.

Recently, Visual Transformer (ViT) has been widely used in various fields of computer vision due to applying self-attention mechanism in the spatial domain to modeling global knowledge. Especially in medical image segmentation (MIS), many works are devoted to combining ViT and CNN, and even some works directly utilize pure ViT-based models. However, recent works improved models in the aspect of spatial domain while ignoring the importance of frequency domain information. Therefore, we propose Multi-axis External Weights UNet (MEW-UNet) for MIS based on the U-shape architecture by replacing self-attention in ViT with our Multi-axis External Weights block. Specifically, our block performs a Fourier transform on the three axes of the input feature and assigns the external weight in the frequency domain, which is generated by our Weights Generator. Then, an inverse Fourier transform is performed to change the features back to the spatial domain. We evaluate our model on four datasets and achieve state-of-the-art performances. In particular, on the Synapse dataset, our method outperforms MT-UNet by 10.15mm in terms of HD95. Code is available at https://github.com/JCruan519/MEW-UNet.

Suncheng Xiang, Jingsheng Gao, Mengyuan Guan et al.

Generalizable person re-identification (Re-ID) is a very hot research topic in machine learning and computer vision, which plays a significant role in realistic scenarios due to its various applications in public security and video surveillance. However, previous methods mainly focus on the visual representation learning, while neglect to explore the potential of semantic features during training, which easily leads to poor generalization capability when adapted to the new domain. In this paper, we propose a Multi-Modal Equivalent Transformer called MMET for more robust visual-semantic embedding learning on visual, textual and visual-textual tasks respectively. To further enhance the robust feature learning in the context of transformer, a dynamic masking mechanism called Masked Multimodal Modeling strategy (MMM) is introduced to mask both the image patches and the text tokens, which can jointly works on multimodal or unimodal data and significantly boost the performance of generalizable person Re-ID. Extensive experiments on benchmark datasets demonstrate the competitive performance of our method over previous approaches. We hope this method could advance the research towards visual-semantic representation learning. Our source code is also publicly available at https://github.com/JeremyXSC/MMET.

Suncheng Xiang, Hao Chen, Wei Ran et al.

Person re-identification plays a significant role in realistic scenarios due to its various applications in public security and video surveillance. Recently, leveraging the supervised or semi-unsupervised learning paradigms, which benefits from the large-scale datasets and strong computing performance, has achieved a competitive performance on a specific target domain. However, when Re-ID models are directly deployed in a new domain without target samples, they always suffer from considerable performance degradation and poor domain generalization. To address this challenge, we propose a Deep Multimodal Fusion network to elaborate rich semantic knowledge for assisting in representation learning during the pre-training. Importantly, a multimodal fusion strategy is introduced to translate the features of different modalities into the common space, which can significantly boost generalization capability of Re-ID model. As for the fine-tuning stage, a realistic dataset is adopted to fine-tune the pre-trained model for better distribution alignment with real-world data. Comprehensive experiments on benchmarks demonstrate that our method can significantly outperform previous domain generalization or meta-learning methods with a clear margin. Our source code will also be publicly available at https://github.com/JeremyXSC/DMF.

Ziyi Wang, Yuanmei Zhang, Dorna Esrafilzadeh et al.

Early and accurate segmentation of colorectal polyps is critical for reducing colorectal cancer mortality, which has been extensively explored by academia and industry. However, current deep learning-based polyp segmentation models either compromise clinical decision-making by providing ambiguous polyp margins in segmentation outputs or rely on heavy architectures with high computational complexity, resulting in insufficient inference speeds for real-time colorectal endoscopic applications. To address this problem, we propose MicroAUNet, a light-weighted attention-based segmentation network that combines depthwise-separable dilated convolutions with a single-path, parameter-shared channel-spatial attention block to strengthen multi-scale boundary features. On the basis of it, a progressive two-stage knowledge-distillation scheme is introduced to transfer semantic and boundary cues from a high-capacity teacher. Extensive experiments on benchmarks also demonstrate the state-of-the-art accuracy under extremely low model complexity, indicating that MicroAUNet is suitable for real-time clinical polyp segmentation. The code is publicly available at https://github.com/JeremyXSC/MicroAUNet.

Suncheng Xiang, Chengfeng Zhou, Zhengjie Zhang et al.

Colonoscopic Polyp Re-Identification aims to match the same polyp from a large gallery with images from different views taken using different cameras and plays an important role in the prevention and treatment of colorectal cancer. However, traditional methods for object ReID directly adopting CNN models trained on the ImageNet dataset usually produce unsatisfactory retrieval performance on colonoscopic datasets due to the large domain gap. Additionally, these methods neglect to explore the potential of self-discrepancy among intra-class or inter-class relations in the colonoscopic polyp dataset, which remains an open research problem in the medical community. To solve this dilemma, we propose a simple but effective training method named Colo-ReID, which can help our model learn more general and discriminative knowledge based on the meta-learning strategy in scenarios with fewer samples. Based on this, a dynamic Meta-Learning Regulation mechanism called MLR is introduced to further boost the performance of polyp re-identification. Our experimental results show that Colo-ReID consistently outperforms second-best method in terms of mAP performance by +2.3% on polyp re-identification task. Our source code is also publicly available at https://github.com/JeremyXSC/Colo-ReID.

Jiacheng Ruan, Jincheng Li, Suncheng Xiang

In the realm of medical image segmentation, both CNN-based and Transformer-based models have been extensively explored. However, CNNs exhibit limitations in long-range modeling capabilities, whereas Transformers are hampered by their quadratic computational complexity. Recently, State Space Models (SSMs), exemplified by Mamba, have emerged as a promising approach. They not only excel in modeling long-range interactions but also maintain a linear computational complexity. In this paper, leveraging state space models, we propose a U-shape architecture model for medical image segmentation, named Vision Mamba UNet (VM-UNet). Specifically, the Visual State Space (VSS) block is introduced as the foundation block to capture extensive contextual information, and an asymmetrical encoder-decoder structure is constructed with fewer convolution layers to save calculation cost. We conduct comprehensive experiments on the ISIC17, ISIC18, and Synapse datasets, and the results indicate that VM-UNet performs competitively in medical image segmentation tasks. To our best knowledge, this is the first medical image segmentation model constructed based on the pure SSM-based model. We aim to establish a baseline and provide valuable insights for the future development of more efficient and effective SSM-based segmentation systems. Our code is available at https://github.com/JCruan519/VM-UNet.

Ziyi Wang, Zhengjie Zhang, Jingsheng Gao et al.

Colo-segment recognition in colonoscopy videos is a key requirement for many downstream tasks, but existing automatic recognition methods only use colonoscopy images without fully exploiting the use of temporal information, leading to poor performance. Additionally, relevant public video-based datasets are in scarcity. To tackle this problem, we curate and release a labeled dataset specifically for the task of colo-segment recognition. In addition, we propose a two-stage deep learning-based framework, Colo-Segment Recognition via SpatioTemporal Network (ST-ColoNet), for the task of colo-segment recognition from colonoscopy videos which includes the Colorlaus module that uses metric learning to optimize edge-mediated spatial feature extraction, as well as the Full-Temp module which combines three self-attention patterns to better approximate full self-attention on long colonoscopy sequences and optimize temporal feature aggregation. Through extensive ablation experiments, we show that our framework is capable of achieving state-of-the-art performance on the task of colo-segment recognition, achieving an accuracy of 81.0% and F1-score of 70.7%, which is a tremendous improvement over state-of-the-art methods.

Suncheng Xiang, Jiale Guan, Shilun Cai et al.

Colonoscopic Polyp Re-Identification aims to match the same polyp from a large gallery with images from different views taken using different cameras, which plays an important role in the prevention and treatment of colorectal cancer in computer-aided diagnosis. However, traditional methods for object ReID directly adopting CNN models trained on the ImageNet dataset usually produce unsatisfactory retrieval performance on colonoscopic datasets due to the large domain gap. Worsely, these solutions typically learn unimodal modal representations on the basis of visual samples, which fails to explore complementary information from other different modalities. To address this challenge, we propose a novel Deep Multimodal Collaborative Learning framework named DMCL for polyp re-identification, which can effectively encourage multimodal knowledge collaboration and reinforce generalization capability in medical scenarios. On the basis of it, a dynamic multimodal feature fusion strategy is introduced to leverage the optimized visual-text representations for multimodal fusion via end-to-end training. Experiments on the standard benchmarks show the benefits of the multimodal setting over state-of-the-art unimodal ReID models, especially when combined with the collaborative multimodal fusion strategy. The code is publicly available at https://github.com/JeremyXSC/DMCL.

Cenwei Zhang, Suncheng Xiang, Lei You

Medical segmentation foundation models such as SAM and MedSAM provide strong prompt-driven segmentation, but their image encoders are still too large for many clinical settings. Compression is also risky in medicine because a model can keep high Dice while losing boundary fidelity. We propose MedCore, a structured pruning framework for MedSAM. The main idea is to preserve two kinds of structures: structures that became important during SAM-to-MedSAM adaptation, and structures that have high boundary leverage. We identify the first type by a dual-intervention score that compares zeroing a group with resetting it to its original SAM weight. We identify the second type by boundary-aware Fisher estimation. We also introduce a boundary leverage principle, which shows that compression-induced boundary displacement is controlled by logit perturbation on the boundary divided by the logit spatial gradient. This principle explains why boundary metrics can degrade even when Dice remains high. On polyp segmentation benchmarks, MedCore reduces parameters by 60.0% and FLOPs by 58.4% while achieving Dice 0.9549, Boundary F1 0.6388, and HD95 5.14 after recovery fine-tuning. It also reaches 86.6% parameter reduction and 90.4G FLOPs with strong boundary quality. Our analysis further shows that MedSAM lies in a head-fragile boundary regime: head-pruning steps have 2.887 times larger 95th-percentile boundary leverage than MLP-pruning steps, and this logit-level effect is consistent with BF1 and HD95 degradation. Our code is available at https://github.com/cenweizhang/MedCore.

Qingzhong Chen, Shilun Cai, Crystal Cai et al.

Colonoscopic video retrieval, which is a critical part of polyp treatment, has great clinical significance for the prevention and treatment of colorectal cancer. However, retrieval models trained on action recognition datasets usually produce unsatisfactory retrieval results on colonoscopic datasets due to the large domain gap between them. To seek a solution to this problem, we construct a large-scale colonoscopic dataset named Colo-Pair for medical practice. Based on this dataset, a simple yet effective training method called Colo-SCRL is proposed for more robust representation learning. It aims to refine general knowledge from colonoscopies through masked autoencoder-based reconstruction and momentum contrast to improve retrieval performance. To the best of our knowledge, this is the first attempt to employ the contrastive learning paradigm for medical video retrieval. Empirical results show that our method significantly outperforms current state-of-the-art methods in the colonoscopic video retrieval task.

Jingsheng Gao, Zeyu Li, Suncheng Xiang et al.

A huge number of multi-participant dialogues happen online every day, which leads to difficulty in understanding the nature of dialogue dynamics for both humans and machines. Dialogue disentanglement aims at separating an entangled dialogue into detached sessions, thus increasing the readability of long disordered dialogue. Previous studies mainly focus on message-pair classification and clustering in two-step methods, which cannot guarantee the whole clustering performance in a dialogue. To address this challenge, we propose a simple yet effective model named CluCDD, which aggregates utterances by contrastive learning. More specifically, our model pulls utterances in the same session together and pushes away utterances in different ones. Then a clustering method is adopted to generate predicted clustering labels. Comprehensive experiments conducted on the Movie Dialogue dataset and IRC dataset demonstrate that our model achieves a new state-of-the-art result.

Hongwei Xu, Suncheng Xiang, Dahong Qian

The softmax-based loss functions and its variants (e.g., cosface, sphereface, and arcface) significantly improve the face recognition performance in wild unconstrained scenes. A common practice of these algorithms is to perform optimizations on the multiplication between the embedding features and the linear transformation matrix. However in most cases, the dimension of embedding features is given based on traditional design experience, and there is less-studied on improving performance using the feature itself when giving a fixed size. To address this challenge, this paper presents a softmax approximation method called SubFace, which employs the subspace feature to promote the performance of face recognition. Specifically, we dynamically select the non-overlapping subspace features in each batch during training, and then use the subspace features to approximate full-feature among softmax-based loss, so the discriminability of the deep model can be significantly enhanced for face recognition. Comprehensive experiments conducted on benchmark datasets demonstrate that our method can significantly improve the performance of vanilla CNN baseline, which strongly proves the effectiveness of subspace strategy with the margin-based loss.

Jingsheng Gao, Jiacheng Ruan, Suncheng Xiang et al.

With the success of pre-trained visual-language (VL) models such as CLIP in visual representation tasks, transferring pre-trained models to downstream tasks has become a crucial paradigm. Recently, the prompt tuning paradigm, which draws inspiration from natural language processing (NLP), has made significant progress in VL field. However, preceding methods mainly focus on constructing prompt templates for text and visual inputs, neglecting the gap in class label representations between the VL models and downstream tasks. To address this challenge, we introduce an innovative label alignment method named \textbf{LAMM}, which can dynamically adjust the category embeddings of downstream datasets through end-to-end training. Moreover, to achieve a more appropriate label distribution, we propose a hierarchical loss, encompassing the alignment of the parameter space, feature space, and logits space. We conduct experiments on 11 downstream vision datasets and demonstrate that our method significantly improves the performance of existing multi-modal prompt learning models in few-shot scenarios, exhibiting an average accuracy improvement of 2.31(\%) compared to the state-of-the-art methods on 16 shots. Moreover, our methodology exhibits the preeminence in continual learning compared to other prompt tuning methods. Importantly, our method is synergistic with existing prompt tuning methods and can boost the performance on top of them. Our code and dataset will be publicly available at https://github.com/gaojingsheng/LAMM.

Jiacheng Ruan, Daize Dong, Xiaoye Qu et al.

Mixture-of-Experts (MoE) models substantially improve performance by increasing the capacity of dense architectures. However, directly training MoE models requires considerable computational resources and introduces extra overhead in parameter storage and deployment. Therefore, it is critical to develop an approach that leverages the multi-expert capability of MoE to enhance performance while incurring minimal additional cost. To this end, we propose a novel pre-training approach, termed ExFusion, which improves the efficiency of Transformer training through multi-expert fusion. Specifically, during the initialization phase, ExFusion upcycles the feed-forward network (FFN) of the Transformer into a multi-expert configuration, where each expert is assigned a weight for later parameter fusion. During training, these weights allow multiple experts to be fused into a single unified expert equivalent to the original FFN, which is subsequently used for forward computation. As a result, ExFusion introduces multi-expert characteristics into the training process while incurring only marginal computational cost compared to standard dense training. After training, the learned weights are used to integrate multi-experts into a single unified expert, thereby eliminating additional overhead in storage and deployment. Extensive experiments on a variety of computer vision and natural language processing tasks demonstrate the effectiveness of the proposed method.

Sijia Du, Chengfeng Zhou, Suncheng Xiang et al.

Objective: Depth estimation is crucial for endoscopic navigation and manipulation, but obtaining ground-truth depth maps in real clinical scenarios, such as the colon, is challenging. This study aims to develop a robust framework that generalizes well to real colonoscopy images, overcoming challenges like non-Lambertian surface reflection and diverse data distributions. Methods: We propose a framework combining a convolutional neural network (CNN) for capturing local features and a Transformer for capturing global information. An uncertainty-based fusion block was designed to enhance generalization by identifying complementary contributions from the CNN and Transformer branches. The network can be trained with simulated datasets and generalize directly to unseen clinical data without any fine-tuning. Results: Our method is validated on multiple datasets and demonstrates an excellent generalization ability across various datasets and anatomical structures. Furthermore, qualitative analysis in real clinical scenarios confirmed the robustness of the proposed method. Conclusion: The integration of local and global features through the CNN-Transformer architecture, along with the uncertainty-based fusion block, improves depth estimation performance and generalization in both simulated and real-world endoscopic environments. Significance: This study offers a novel approach to estimate depth maps for endoscopy images despite the complex conditions in clinic, serving as a foundation for endoscopic automatic navigation and other clinical tasks, such as polyp detection and segmentation.

Tianyu Zhou, Junyi Tang, Zehui Li et al.

Colonoscopic polyp diagnosis is pivotal for early colorectal cancer detection, yet traditional automated reporting suffers from inconsistencies and hallucinations due to the scarcity of high-quality multimodal medical data. To bridge this gap, we propose LDP, a novel framework leveraging multimodal large language models (MLLMs) for professional polyp diagnosis report generation. Specifically, we curate MMEndo, a multimodal endoscopic dataset comprising expert-annotated colonoscopy image-text pairs. We fine-tune the Qwen2-VL-7B backbone using Parameter-Efficient Fine-Tuning (LoRA) and align it with clinical standards via Direct Preference Optimization (DPO). Extensive experiments show that our LDP outperforms existing baselines on both automated metrics and rigorous clinical expert evaluations (achieving a Physician Score of 7.2/10), significantly reducing training computational costs by 833x compared to full fine-tuning. The proposed solution offers a scalable, clinically viable path for primary healthcare, with additional validation on the IU-XRay dataset confirming its robustness.

Jiacheng Ruan, Jingsheng Gao, Mingye Xie et al.

Adapter-Tuning (AT) method involves freezing a pre-trained model and introducing trainable adapter modules to acquire downstream knowledge, thereby calibrating the model for better adaptation to downstream tasks. This paper proposes a distillation framework for the AT method instead of crafting a carefully designed adapter module, which aims to improve fine-tuning performance. For the first time, we explore the possibility of combining the AT method with knowledge distillation. Via statistical analysis, we observe significant differences in the knowledge acquisition between adapter modules of different models. Leveraging these differences, we propose a simple yet effective framework called inverse Distillation Adapter-Tuning (iDAT). Specifically, we designate the smaller model as the teacher and the larger model as the student. The two are jointly trained, and online knowledge distillation is applied to inject knowledge of different perspective to student model, and significantly enhance the fine-tuning performance on downstream tasks. Extensive experiments on the VTAB-1K benchmark with 19 image classification tasks demonstrate the effectiveness of iDAT. The results show that using existing AT method within our iDAT framework can further yield a 2.66% performance gain, with only an additional 0.07M trainable parameters. Our approach compares favorably with state-of-the-arts without bells and whistles. Our code is available at https://github.com/JCruan519/iDAT.

Suncheng Xiang, Xiaoyang Wang, Junjie Jiang et al.

Colonoscopic Polyp Re-Identification aims to match the same polyp from a large gallery with images from different views taken using different cameras, which plays an important role in the prevention and treatment of colorectal cancer in computer-aided diagnosis. However, the coarse resolution of high-level features of a specific polyp often leads to inferior results for small objects where detailed information is important. To address this challenge, we propose a novel architecture, named Gated Progressive Fusion network, to selectively fuse features from multiple levels using gates in a fully connected way for polyp ReID. On the basis of it, a gated progressive fusion strategy is introduced to achieve layer-wise refinement of semantic information through multi-level feature interactions. Experiments on standard benchmarks show the benefits of the multimodal setting over state-of-the-art unimodal ReID models, especially when combined with the specialized multimodal fusion strategy.

Suncheng Xiang, Cang Liu, Sijia Du et al.

Colonoscopic Polyp Re-Identification aims to match a specific polyp in a large gallery with different cameras and views, which plays a key role for the prevention and treatment of colorectal cancer in the computer-aided diagnosis. However, traditional methods mainly focus on the visual representation learning, while neglect to explore the potential of semantic features during training, which may easily leads to poor generalization capability when adapted the pretrained model into the new scenarios. To relieve this dilemma, we propose a simple but effective training method named VT-ReID, which can remarkably enrich the representation of polyp videos with the interchange of high-level semantic information. Moreover, we elaborately design a novel clustering mechanism to introduce prior knowledge from textual data, which leverages contrastive learning to promote better separation from abundant unlabeled text data. To the best of our knowledge, this is the first attempt to employ the visual-text feature with clustering mechanism for the colonoscopic polyp re-identification. Empirical results show that our method significantly outperforms current state-of-the art methods with a clear margin.

Jiahao Bao, Huazhen Liu, Yu Zhuang et al.

Orthognathic surgery repositions jaw bones to restore occlusion and enhance facial aesthetics. Accurate simulation of postoperative facial morphology is essential for preoperative planning. However, traditional biomechanical models are computationally expensive, while geometric deep learning approaches often lack interpretability. In this study, we develop and validate a physics-informed geometric deep learning framework named PhysSFI-Net for precise prediction of soft tissue deformation following orthognathic surgery. PhysSFI-Net consists of three components: a hierarchical graph module with craniofacial and surgical plan encoders combined with attention mechanisms to extract skeletal-facial interaction features; a Long Short-Term Memory (LSTM)-based sequential predictor for incremental soft tissue deformation; and a biomechanics-inspired module for high-resolution facial surface reconstruction. Model performance was assessed using point cloud shape error (Hausdorff distance), surface deviation error, and landmark localization error (Euclidean distances of craniomaxillofacial landmarks) between predicted facial shapes and corresponding ground truths. A total of 135 patients who underwent combined orthodontic and orthognathic treatment were included for model training and validation. Quantitative analysis demonstrated that PhysSFI-Net achieved a point cloud shape error of 1.070 +/- 0.088 mm, a surface deviation error of 1.296 +/- 0.349 mm, and a landmark localization error of 2.445 +/- 1.326 mm. Comparative experiments indicated that PhysSFI-Net outperformed the state-of-the-art method ACMT-Net in prediction accuracy. In conclusion, PhysSFI-Net enables interpretable, high-resolution prediction of postoperative facial morphology with superior accuracy, showing strong potential for clinical application in orthognathic surgical planning and simulation.

Jiacheng Ruan, Xian Gao, Suncheng Xiang et al.

Parameter-efficient tuning (PET) techniques calibrate the model's predictions on downstream tasks by freezing the pre-trained models and introducing a small number of learnable parameters. However, despite the numerous PET methods proposed, their robustness has not been thoroughly investigated. In this paper, we systematically explore the robustness of four classical PET techniques (e.g., VPT, Adapter, AdaptFormer, and LoRA) under both white-box attacks and information perturbations. For white-box attack scenarios, we first analyze the performance of PET techniques using FGSM and PGD attacks. Subsequently, we further explore the transferability of adversarial samples and the impact of learnable parameter quantities on the robustness of PET methods. Under information perturbation attacks, we introduce four distinct perturbation strategies, including Patch-wise Drop, Pixel-wise Drop, Patch Shuffle, and Gaussian Noise, to comprehensively assess the robustness of these PET techniques in the presence of information loss. Via these extensive studies, we enhance the understanding of the robustness of PET methods, providing valuable insights for improving their performance in computer vision applications. The code is available at https://github.com/JCruan519/PETRobustness.

Suncheng Xiang, Guanjie You, Mengyuan Guan et al.

Person re-identification (re-ID) plays an important role in applications such as public security and video surveillance. Recently, learning from synthetic data, which benefits from the popularity of synthetic data engine, has attracted great attention from the public eyes. However, existing datasets are limited in quantity, diversity and realisticity, and cannot be efficiently used for re-ID problem. To address this challenge, we manually construct a large-scale person dataset named FineGPR with fine-grained attribute annotations. Moreover, aiming to fully exploit the potential of FineGPR and promote the efficient training from millions of synthetic data, we propose an attribute analysis pipeline called AOST, which dynamically learns attribute distribution in real domain, then eliminates the gap between synthetic and real-world data and thus is freely deployed to new scenarios. Experiments conducted on benchmarks demonstrate that FineGPR with AOST outperforms (or is on par with) existing real and synthetic datasets, which suggests its feasibility for re-ID task and proves the proverbial less-is-more principle. Our synthetic FineGPR dataset is publicly available at https://github.com/JeremyXSC/FineGPR.

Jiacheng Ruan, Jingsheng Gao, Mingye Xie et al.

Recently, Visual Transformer (ViT) has been extensively used in medical image segmentation (MIS) due to applying self-attention mechanism in the spatial domain to modeling global knowledge. However, many studies have focused on improving models in the spatial domain while neglecting the importance of frequency domain information. Therefore, we propose Multi-axis External Weights UNet (MEW-UNet) based on the U-shape architecture by replacing self-attention in ViT with our Multi-axis External Weights block. Specifically, our block performs a Fourier transform on the three axes of the input features and assigns the external weight in the frequency domain, which is generated by our External Weights Generator. Then, an inverse Fourier transform is performed to change the features back to the spatial domain. We evaluate our model on four datasets, including Synapse, ACDC, ISIC17 and ISIC18 datasets, and our approach demonstrates competitive performance, owing to its effective utilization of frequency domain information.

Jiacheng Ruan, Jingsheng Gao, Mingye Xie et al.

The Parameter-Efficient Fine-Tuning (PEFT) method, which adjusts or introduces fewer trainable parameters to calibrate pre-trained models on downstream tasks, has become a recent research interest. However, existing PEFT methods within the traditional fine-tiuning framework have two main shortcomings: 1) They overlook the explicit association between trainable parameters and downstream task knowledge. 2) They neglect the interaction between the intrinsic task-agnostic knowledge of pre-trained models and the task-specific knowledge in downstream tasks. To address this gap, we propose a novel fine-tuning framework, named GIST, in a plug-and-play manner. Specifically, our framework first introduces a trainable token, called the Gist token, when applying PEFT methods on downstream tasks. This token serves as an aggregator of the task-specific knowledge learned by the PEFT methods and forms an explicit association with downstream knowledge. Furthermore, to facilitate explicit interaction between task-agnostic and task-specific knowledge, we introduce the concept of Knowledge Interaction via a Bidirectional Kullback-Leibler Divergence objective. As a result, PEFT methods within our framework can make the pre-trained model understand downstream tasks more comprehensively by leveraging the knowledge interaction. Extensive experiments demonstrate the universality and scalability of our framework. Notably, on the VTAB-1K benchmark, we employ the Adapter (a prevalent PEFT method) within our GIST framework and achieve a performance boost of 2.25%, with an increase of only 0.8K parameters. The Code will be released.

Ruijia Chang, Suncheng Xiang, Chengyu Zhou et al.

Chromosome recognition is an essential task in karyotyping, which plays a vital role in birth defect diagnosis and biomedical research. However, existing classification methods face significant challenges due to the inter-class similarity and intra-class variation of chromosomes. To address this issue, we propose a supervised contrastive learning strategy that is tailored to train model-agnostic deep networks for reliable chromosome classification. This method enables extracting fine-grained chromosomal embeddings in latent space. These embeddings effectively expand inter-class boundaries and reduce intra-class variations, enhancing their distinctiveness in predicting chromosome types. On top of two large-scale chromosome datasets, we comprehensively validate the power of our contrastive learning strategy in boosting cutting-edge deep networks such as Transformers and ResNets. Extensive results demonstrate that it can significantly improve models' generalization performance, with an accuracy improvement up to +4.5%. Codes and pretrained models will be released upon acceptance of this work.

Chen Liu, Can Han, Chengfeng Zhou et al.

Gesture recognition is a foundational task in human-machine interaction (HMI). While there has been significant progress in gesture recognition based on surface electromyography (sEMG), accurate recognition of predefined gestures only within a closed set is still inadequate in practice. It is essential to effectively discern and reject unknown gestures of disinterest in a robust system. Numerous methods based on prototype learning (PL) have been proposed to tackle this open set recognition (OSR) problem. However, they do not fully explore the inherent distinctions between known and unknown classes. In this paper, we propose a more effective PL method leveraging two novel and inherent distinctions, feature activation level and projection inconsistency. Specifically, the Feature Activation Enhancement Mechanism (FAEM) widens the gap in feature activation values between known and unknown classes. Furthermore, we introduce Orthogonal Prototype Learning (OPL) to construct multiple perspectives. OPL acts to project a sample from orthogonal directions to maximize the distinction between its two projections, where unknown samples will be projected near the clusters of different known classes while known samples still maintain intra-class similarity. Our proposed method simultaneously achieves accurate closed-set classification for predefined gestures and effective rejection for unknown gestures. Extensive experiments demonstrate its efficacy and superiority in open-set gesture recognition based on sEMG.

Afifa Khaled, Mohammed Sabir, Rizwan Qureshi et al.

The Medical Information Mart for Intensive Care (MIMIC) datasets have become the Kernel of Digital Health Research by providing freely accessible, deidentified records from tens of thousands of critical care admissions, enabling a broad spectrum of applications in clinical decision support, outcome prediction, and healthcare analytics. Although numerous studies and surveys have explored the predictive power and clinical utility of MIMIC based models, critical challenges in data integration, representation, and interoperability remain underexplored. This paper presents a comprehensive survey that focuses uniquely on open problems. We identify persistent issues such as data granularity, cardinality limitations, heterogeneous coding schemes, and ethical constraints that hinder the generalizability and real-time implementation of machine learning models. We highlight key progress in dimensionality reduction, temporal modelling, causal inference, and privacy preserving analytics, while also outlining promising directions including hybrid modelling, federated learning, and standardized preprocessing pipelines. By critically examining these structural limitations and their implications, this survey offers actionable insights to guide the next generation of MIMIC powered digital health innovations.

Zeyu Li, Suncheng Xiang, Tong Yu et al.

The recognition of underwater audio plays a significant role in identifying a vessel while it is in motion. Underwater target recognition tasks have a wide range of applications in areas such as marine environmental protection, detection of ship radiated noise, underwater noise control, and coastal vessel dispatch. The traditional UATR task involves training a network to extract features from audio data and predict the vessel type. The current UATR dataset exhibits shortcomings in both duration and sample quantity. In this paper, we propose Oceanship, a large-scale and diverse underwater audio dataset. This dataset comprises 15 categories, spans a total duration of 121 hours, and includes comprehensive annotation information such as coordinates, velocity, vessel types, and timestamps. We compiled the dataset by crawling and organizing original communication data from the Ocean Communication Network (ONC) database between 2021 and 2022. While audio retrieval tasks are well-established in general audio classification, they have not been explored in the context of underwater audio recognition. Leveraging the Oceanship dataset, we introduce a baseline model named Oceannet for underwater audio retrieval. This model achieves a recall at 1 (R@1) accuracy of 67.11% and a recall at 5 (R@5) accuracy of 99.13% on the Deepship dataset.

Zelin Liu, Sicheng Dong, Bocheng Li et al.

Vision foundation models like the Segment Anything Model (SAM), pretrained on large-scale natural image datasets, often struggle in medical image segmentation due to a lack of domain-specific adaptation. In clinical practice, fine-tuning such models efficiently for medical downstream tasks with minimal resource demands, while maintaining strong performance, is challenging. To address these issues, we propose BALR-SAM, a boundary-aware low-rank adaptation framework that enhances SAM for medical imaging. It combines three tailored components: (1) a Complementary Detail Enhancement Network (CDEN) using depthwise separable convolutions and multi-scale fusion to capture boundary-sensitive features essential for accurate segmentation; (2) low-rank adapters integrated into SAM's Vision Transformer blocks to optimize feature representation and attention for medical contexts, while simultaneously significantly reducing the parameter space; and (3) a low-rank tensor attention mechanism in the mask decoder, cutting memory usage by 75% and boosting inference speed. Experiments on standard medical segmentation datasets show that BALR-SAM, without requiring prompts, outperforms several state-of-the-art (SOTA) methods, including fully fine-tuned MedSAM, while updating just 1.8% (11.7M) of its parameters.

Suncheng Xiang, Jingsheng Gao, Zirui Zhang et al.

Pretraining is a dominant paradigm in computer vision. Generally, supervised ImageNet pretraining is commonly used to initialize the backbones of person re-identification (Re-ID) models. However, recent works show a surprising result that CNN-based pretraining on ImageNet has limited impacts on Re-ID system due to the large domain gap between ImageNet and person Re-ID data. To seek an alternative to traditional pretraining, here we investigate semantic-based pretraining as another method to utilize additional textual data against ImageNet pretraining. Specifically, we manually construct a diversified FineGPR-C caption dataset for the first time on person Re-ID events. Based on it, a pure semantic-based pretraining approach named VTBR is proposed to adopt dense captions to learn visual representations with fewer images. We train convolutional neural networks from scratch on the captions of FineGPR-C dataset, and then transfer them to downstream Re-ID tasks. Comprehensive experiments conducted on benchmark datasets show that our VTBR can achieve competitive performance compared with ImageNet pretraining - despite using up to 1.4x fewer images, revealing its potential in Re-ID pretraining.

Suncheng Xiang, Yuzhuo Fu, Mengyuan Guan et al.

Employing clustering strategy to assign unlabeled target images with pseudo labels has become a trend for person re-identification (re-ID) algorithms in domain adaptation. A potential limitation of these clustering-based methods is that they always tend to introduce noisy labels, which will undoubtedly hamper the performance of our re-ID system. To handle this limitation, an intuitive solution is to utilize collaborative training to purify the pseudo label quality. However, there exists a challenge that the complementarity of two networks, which inevitably share a high similarity, becomes weakened gradually as training process goes on; worse still, these approaches typically ignore to consider the self-discrepancy of intra-class relations. To address this issue, in this paper, we propose a multiple co-teaching framework for domain adaptive person re-ID, opening up a promising direction about self-discrepancy problem under unsupervised condition. On top of that, a mean-teaching mechanism is leveraged to enlarge the difference and discover more complementary features. Comprehensive experiments conducted on several large-scale datasets show that our method achieves competitive performance compared with the state-of-the-arts.

Suncheng Xiang, Yuzhuo Fu, Guanjie You et al.

Person re-identification (re-ID) plays an important role in applications such as public security and video surveillance. Recently, learning from synthetic data, which benefits from the popularity of synthetic data engine, has achieved remarkable performance. However, in pursuit of high accuracy, researchers in the academic always focus on training with large-scale datasets at a high cost of time and label expenses, while neglect to explore the potential of performing efficient training from millions of synthetic data. To facilitate development in this field, we reviewed the previously developed synthetic dataset GPR and built an improved one (GPR+) with larger number of identities and distinguished attributes. Based on it, we quantitatively analyze the influence of dataset attribute on re-ID system. To our best knowledge, we are among the first attempts to explicitly dissect person re-ID from the aspect of attribute on synthetic dataset. This research helps us have a deeper understanding of the fundamental problems in person re-ID, which also provides useful insights for dataset building and future practical usage.

Suncheng Xiang, Yuzhuo Fu, Guanjie You et al.

Person re-identification (re-ID) plays an important role in applications such as public security and video surveillance. Recently, learning from synthetic data, which benefits from the popularity of synthetic data engine, have achieved remarkable performance. However, existing synthetic datasets are in small size and lack of diversity, which hinders the development of person re-ID in real-world scenarios. To address this problem, firstly, we develop a large-scale synthetic data engine, the salient characteristic of this engine is controllable. Based on it, we build a large-scale synthetic dataset, which are diversified and customized from different attributes, such as illumination and viewpoint. Secondly, we quantitatively analyze the influence of dataset attributes on re-ID system. To our best knowledge, this is the first attempt to explicitly dissect person re-ID from the aspect of attribute on synthetic dataset. Comprehensive experiments help us have a deeper understanding of the fundamental problems in person re-ID. Our research also provides useful insights for dataset building and future practical usage.