Santiago Cepeda, Roberto Romero, Daniel Garcia-Perez et al.
Accurately assessing tumor removal is paramount in the management of glioblastoma. We developed a pipeline using MRI scans and neural networks to segment tumor subregions and the surgical cavity in postoperative images. Our model excels in accurately classifying the extent of resection, offering a valuable tool for clinicians in assessing treatment effectiveness.
Klara Leffler, Luigi Tommaso Luppino, Samuel Kuttner et al.
Long axial field-of-view PET scanners offer increased field-of-view and sensitivity compared to traditional PET scanners. However, a significant cost is associated with the densely packed photodetectors required for the extended-coverage systems, limiting clinical utilisation. To mitigate the cost limitations, alternative sparse system configurations have been proposed, allowing an extended field-of-view PET design with detector costs similar to a standard PET system, albeit at the expense of image quality. In this work, we propose a deep sinogram restoration network to fill in the missing sinogram data. Our method utilises a modified Residual U-Net, trained on clinical PET scans from a GE Signa PET/MR, simulating the removal of 50% of the detectors in a chessboard pattern (retaining only 25% of all lines of response). The model successfully recovers missing counts, with a mean absolute error below two events per pixel, outperforming 2D interpolation in both sinogram and reconstructed image domain. Notably, the predicted sinograms exhibit a smoothing effect, leading to reconstructed images lacking sharpness in finer details. Despite these limitations, the model demonstrates a substantial capacity for compensating for the undersampling caused by the sparse detector configuration. This proof-of-concept study suggests that sparse detector configurations, combined with deep learning techniques, offer a viable alternative to conventional PET scanner designs. This approach supports the development of cost-effective, total body PET scanners, allowing a significant step forward in medical imaging technology.
Jørgen A. Agersborg, Luigi T. Luppino, Stian Normann Anfinsen et al.
Several generic methods have recently been developed for change detection in heterogeneous remote sensing data, such as images from synthetic aperture radar (SAR) and multispectral radiometers. However, these are not well suited to detect weak signatures of certain disturbances of ecological systems. To resolve this problem we propose a new approach based on image-to-image translation and one-class classification (OCC). We aim to map forest mortality caused by an outbreak of geometrid moths in a sparsely forested forest-tundra ecotone using multisource satellite images. The images preceding and following the event are collected by Landsat-5 and RADARSAT-2, respectively. Using a recent deep learning method for change-aware image translation, we compute difference images in both satellites' respective domains. These differences are stacked with the original pre- and post-event images and passed to an OCC trained on a small sample from the targeted change class. The classifier produces a credible map of the complex pattern of forest mortality.
Luigi T. Luppino, Mads A. Hansen, Michael Kampffmeyer et al.
Image translation with convolutional autoencoders has recently been used as an approach to multimodal change detection in bitemporal satellite images. A main challenge is the alignment of the code spaces by reducing the contribution of change pixels to the learning of the translation function. Many existing approaches train the networks by exploiting supervised information of the change areas, which, however, is not always available. We propose to extract relational pixel information captured by domain-specific affinity matrices at the input and use this to enforce alignment of the code spaces and reduce the impact of change pixels on the learning objective. A change prior is derived in an unsupervised fashion from pixel pair affinities that are comparable across domains. To achieve code space alignment we enforce that pixel with similar affinity relations in the input domains should be correlated also in code space. We demonstrate the utility of this procedure in combination with cycle consistency. The proposed approach are compared with state-of-the-art deep learning algorithms. Experiments conducted on four real datasets show the effectiveness of our methodology.
Luigi Tommaso Luppino, Michael Kampffmeyer, Filippo Maria Bianchi et al.
Image translation with convolutional neural networks has recently been used as an approach to multimodal change detection. Existing approaches train the networks by exploiting supervised information of the change areas, which, however, is not always available. A main challenge in the unsupervised problem setting is to avoid that change pixels affect the learning of the translation function. We propose two new network architectures trained with loss functions weighted by priors that reduce the impact of change pixels on the learning objective. The change prior is derived in an unsupervised fashion from relational pixel information captured by domain-specific affinity matrices. Specifically, we use the vertex degrees associated with an absolute affinity difference matrix and demonstrate their utility in combination with cycle consistency and adversarial training. The proposed neural networks are compared with state-of-the-art algorithms. Experiments conducted on three real datasets show the effectiveness of our methodology.
Luigi T. Luppino, Filippo M. Bianchi, Gabriele Moser et al.
Change detection in heterogeneous multitemporal satellite images is an emerging topic in remote sensing. In this paper we propose a framework, based on image regression, to perform change detection in heterogeneous multitemporal satellite images, which has become a main topic in remote sensing. Our method learns a transformation to map the first image to the domain of the other image, and vice versa. Four regression methods are selected to carry out the transformation: Gaussian processes, support vector machines, random forests, and a recently proposed kernel regression method called homogeneous pixel transformation. To evaluate not only potentials and limitations of our framework, but also the pros and cons of each regression method, we perform experiments on two data sets. The results indicates that random forests achieve good performance, are fast and robust to hyperparameters, whereas the homogeneous pixel transformation method can achieve better accuracy at the cost of a higher complexity.
Luigi Tommaso Luppino, Stian Normann Anfinsen, Gabriele Moser et al.
Change detection in heterogeneous multitemporal satellite images is a challenging and still not much studied topic in remote sensing and earth observation. This paper focuses on comparison of image pairs covering the same geographical area and acquired by two different sensors, one optical radiometer and one synthetic aperture radar, at two different times. We propose a clustering-based technique to detect changes, identified as clusters that split or merge in the different images. To evaluate potentials and limitations of our method, we perform experiments on real data. Preliminary results confirm the relationship between splits and merges of clusters and the occurrence of changes. However, it becomes evident that it is necessary to incorporate prior, ancillary, or application-specific information to improve the interpretation of clustering results and to identify unambiguously the areas of change.