Aurélie Névéol

Jamil Zaghir, Marco Naguib, Mina Bjelogrlic et al.

Prompt engineering is crucial for harnessing the potential of large language models (LLMs), especially in the medical domain where specialized terminology and phrasing is used. However, the efficacy of prompt engineering in the medical domain remains to be explored. In this work, 114 recent studies (2022-2024) applying prompt engineering in medicine, covering prompt learning (PL), prompt tuning (PT), and prompt design (PD) are reviewed. PD is the most prevalent (78 articles). In 12 papers, PD, PL, and PT terms were used interchangeably. ChatGPT is the most commonly used LLM, with seven papers using it for processing sensitive clinical data. Chain-of-Thought emerges as the most common prompt engineering technique. While PL and PT articles typically provide a baseline for evaluating prompt-based approaches, 64% of PD studies lack non-prompt-related baselines. We provide tables and figures summarizing existing work, and reporting recommendations to guide future research contributions.

Clément Morand, Anne-Laure Ligozat, Aurélie Névéol

The compute requirements associated with training Artificial Intelligence (AI) models have increased exponentially over time. Optimisation strategies aim to reduce the energy consumption and environmental impacts associated with AI, possibly shifting impacts from the use phase to the manufacturing phase in the life-cycle of hardware. This paper investigates the evolution of individual graphics cards production impacts and of the environmental impacts associated with training Machine Learning (ML) models over time. We collect information on graphics cards used to train ML models and released between 2013 and 2023. We assess the environmental impacts associated with the production of each card to visualize the trends on the same period. Then, using information on notable AI systems from the Epoch AI dataset we assess the environmental impacts associated with training each system. The environmental impacts of graphics cards production have increased continuously. The energy consumption and environmental impacts associated with training models have increased exponentially, even when considering reduction strategies such as location shifting to places with less carbon intensive electricity mixes. These results suggest that current impact reduction strategies cannot curb the growth in the environmental impacts of AI. This is consistent with rebound effect, where the efficiency increases fuel the creation of even larger models thereby cancelling the potential impact reduction. Furthermore, these results highlight the importance of considering the impacts of hardware over the entire life-cycle rather than the sole usage phase in order to avoid impact shifting. The environmental impact of AI cannot be reduced without reducing AI activities as well as increasing efficiency.

Clément Morand, Anne-Laure Ligozat, Aurélie Névéol

Recent Machine Learning (ML) approaches have shown increased performance on benchmarks but at the cost of escalating computational demands. Hardware, algorithmic and carbon optimizations have been proposed to curb energy consumption and environmental impacts. Can these strategies lead to sustainable ML model training? Here, we estimate the environmental impacts associated with training notable AI systems over the last decade, including Large Language Models, with a focus on the life cycle of graphics cards. Our analysis reveals two critical trends: First, the impacts of graphics cards production have increased steadily over this period; Second, energy consumption and environmental impacts associated with training ML models have increased exponentially, even when considering reduction strategies such as location shifting to places with less carbon intensive electricity mixes. Optimization strategies do not mitigate the impacts induced by model training, evidencing rebound effect. We show that the impacts of hardware must be considered over the entire life cycle rather than the sole use phase in order to avoid impact shifting. Our study demonstrates that increasing efficiency alone cannot ensure sustainability in ML. Mitigating the environmental impact of AI also requires reducing AI activities and questioning the scale and frequency of resource-intensive training.

Clémence Sebe, Sarah Cohen-Boulakia, Olivier Ferret et al.

Bioinformatics workflows are essential for complex biological data analyses and are often described in scientific articles with source code in public repositories. Extracting detailed workflow information from articles can improve accessibility and reusability but is hindered by limited annotated corpora. To address this, we framed the problem as a low-resource extraction task and tested four strategies: 1) creating a tailored annotated corpus, 2) few-shot named-entity recognition (NER) with an autoregressive language model, 3) NER using masked language models with existing and new corpora, and 4) integrating workflow knowledge into NER models. Using BioToFlow, a new corpus of 52 articles annotated with 16 entities, a SciBERT-based NER model achieved a 70.4 F-measure, comparable to inter-annotator agreement. While knowledge integration improved performance for specific entities, it was less effective across the entire information schema. Our results demonstrate that high-performance information extraction for bioinformatics workflows is achievable.