Automated Segmentation and Recurrence Risk Prediction of Surgically Resected Lung Tumors with Adaptive Convolutional Neural NetworksMarguerite B. Basta, Sarfaraz Hussein, Hsiang Hsu et al.
Lung cancer is the leading cause of cancer related mortality by a significant margin. While new technologies, such as image segmentation, have been paramount to improved detection and earlier diagnoses, there are still significant challenges in treating the disease. In particular, despite an increased number of curative resections, many postoperative patients still develop recurrent lesions. Consequently, there is a significant need for prognostic tools that can more accurately predict a patient's risk for recurrence. In this paper, we explore the use of convolutional neural networks (CNNs) for the segmentation and recurrence risk prediction of lung tumors that are present in preoperative computed tomography (CT) images. First, expanding upon recent progress in medical image segmentation, a residual U-Net is used to localize and characterize each nodule. Then, the identified tumors are passed to a second CNN for recurrence risk prediction. The system's final results are produced with a random forest classifier that synthesizes the predictions of the second network with clinical attributes. The segmentation stage uses the LIDC-IDRI dataset and achieves a dice score of 70.3%. The recurrence risk stage uses the NLST dataset from the National Cancer institute and achieves an AUC of 73.0%. Our proposed framework demonstrates that first, automated nodule segmentation methods can generalize to enable pipelines for a wide range of multitask systems and second, that deep learning and image processing have the potential to improve current prognostic tools. To the best of our knowledge, it is the first fully automated segmentation and recurrence risk prediction system.
MaSS: Multi-attribute Selective Suppression for Utility-preserving Data Transformation from an Information-theoretic PerspectiveYizhuo Chen, Chun-Fu Chen, Hsiang Hsu et al.
The growing richness of large-scale datasets has been crucial in driving the rapid advancement and wide adoption of machine learning technologies. The massive collection and usage of data, however, pose an increasing risk for people's private and sensitive information due to either inadvertent mishandling or malicious exploitation. Besides legislative solutions, many technical approaches have been proposed towards data privacy protection. However, they bear various limitations such as leading to degraded data availability and utility, or relying on heuristics and lacking solid theoretical bases. To overcome these limitations, we propose a formal information-theoretic definition for this utility-preserving privacy protection problem, and design a data-driven learnable data transformation framework that is capable of selectively suppressing sensitive attributes from target datasets while preserving the other useful attributes, regardless of whether or not they are known in advance or explicitly annotated for preservation. We provide rigorous theoretical analyses on the operational bounds for our framework, and carry out comprehensive experimental evaluations using datasets of a variety of modalities, including facial images, voice audio clips, and human activity motion sensor signals. Results demonstrate the effectiveness and generalizability of our method under various configurations on a multitude of tasks. Our code is available at https://github.com/jpmorganchase/MaSS.
16.4LGFeb 1, 2024
Dropout-Based Rashomon Set Exploration for Efficient Predictive Multiplicity EstimationHsiang Hsu, Guihong Li, Shaohan Hu et al.
Predictive multiplicity refers to the phenomenon in which classification tasks may admit multiple competing models that achieve almost-equally-optimal performance, yet generate conflicting outputs for individual samples. This presents significant concerns, as it can potentially result in systemic exclusion, inexplicable discrimination, and unfairness in practical applications. Measuring and mitigating predictive multiplicity, however, is computationally challenging due to the need to explore all such almost-equally-optimal models, known as the Rashomon set, in potentially huge hypothesis spaces. To address this challenge, we propose a novel framework that utilizes dropout techniques for exploring models in the Rashomon set. We provide rigorous theoretical derivations to connect the dropout parameters to properties of the Rashomon set, and empirically evaluate our framework through extensive experimentation. Numerical results show that our technique consistently outperforms baselines in terms of the effectiveness of predictive multiplicity metric estimation, with runtime speedup up to $20\times \sim 5000\times$. With efficient Rashomon set exploration and metric estimation, mitigation of predictive multiplicity is then achieved through dropout ensemble and model selection.
Robust Hybrid Learning With Expert AugmentationAntoine Wehenkel, Jens Behrmann, Hsiang Hsu et al.
Hybrid modelling reduces the misspecification of expert models by combining them with machine learning (ML) components learned from data. Similarly to many ML algorithms, hybrid model performance guarantees are limited to the training distribution. Leveraging the insight that the expert model is usually valid even outside the training domain, we overcome this limitation by introducing a hybrid data augmentation strategy termed \textit{expert augmentation}. Based on a probabilistic formalization of hybrid modelling, we demonstrate that expert augmentation, which can be incorporated into existing hybrid systems, improves generalization. We empirically validate the expert augmentation on three controlled experiments modelling dynamical systems with ordinary and partial differential equations. Finally, we assess the potential real-world applicability of expert augmentation on a dataset of a real double pendulum.