Clemens Kirisits

Martin Bauer, Markus Grasmair, Clemens Kirisits

Optical flow is a powerful tool for the study and analysis of motion in a sequence of images. In this article we study a Horn-Schunck type spatio-temporal regularization functional for image sequences that have a non-Euclidean, time varying image domain. To that end we construct a Riemannian metric that describes the deformation and structure of this evolving surface. The resulting functional can be seen as natural geometric generalization of previous work by Weickert and Schnörr (2001) and Lefèvre and Baillet (2008) for static image domains. In this work we show the existence and wellposedness of the corresponding optical flow problem and derive necessary and sufficient optimality conditions. We demonstrate the functionality of our approach in a series of experiments using both synthetic and real data.

Clemens Kirisits, Michael Quellmalz, Eric Setterqvist

This paper concerns diffraction-tomographic reconstruction of an object characterized by its scattering potential. We establish a rigorous generalization of the Fourier diffraction theorem in arbitrary dimension, giving a precise relation in the Fourier domain between measurements of the scattered wave and reconstructions of the scattering potential. With this theorem at hand, Fourier coverages for different experimental setups are investigated taking into account parameters such as object orientation, direction of incidence and frequency of illumination. Allowing for simultaneous and discontinuous variation of these parameters, a general filtered backpropagation formula is derived resulting in an explicit approximation of the scattering potential for a large class of experimental setups.

José A. Iglesias, Clemens Kirisits

We argue that the time derivative in a fixed coordinate frame may not be the most appropriate measure of time regularity of an optical flow field. Instead, for a given velocity field $v$ we consider the convective acceleration $v_t + \nabla v v$ which describes the acceleration of objects moving according to $v$. Consequently we investigate the suitability of the nonconvex functional $\|v_t + \nabla v v\|^2_{L^2}$ as a regularization term for optical flow. We demonstrate that this term acts as both a spatial and a temporal regularizer and has an intrinsic edge-preserving property. We incorporate it into a contrast invariant and time-regularized variant of the Horn-Schunck functional, prove existence of minimizers and verify experimentally that it addresses some of the problems of basic quadratic models. For the minimization we use an iterative scheme that approximates the original nonlinear problem with a sequence of linear ones. We believe that the convective acceleration may be gainfully introduced in a variety of optical flow models.

Clemens Kirisits, Lukas F. Lang, Otmar Scherzer

We propose a number of variational regularisation methods for the estimation and decomposition of motion fields on the $2$-sphere. While motion estimation is based on the optical flow equation, the presented decomposition models are motivated by recent trends in image analysis. In particular we treat $u+v$ decomposition as well as hierarchical decomposition. Helmholtz decomposition of motion fields is obtained as a natural by-product of the chosen numerical method based on vector spherical harmonics. All models are tested on time-lapse microscopy data depicting fluorescently labelled endodermal cells of a zebrafish embryo.

Clemens Kirisits, Lukas F. Lang, Otmar Scherzer

We extend the concept of optical flow with spatiotemporal regularisation to a dynamic non-Euclidean setting. Optical flow is traditionally computed from a sequence of flat images. The purpose of this paper is to introduce variational motion estimation for images that are defined on an evolving surface. Volumetric microscopy images depicting a live zebrafish embryo serve as both biological motivation and test data.

Clemens Kirisits, Lukas F. Lang, Otmar Scherzer

We extend the concept of optical flow to a dynamic non-Euclidean setting. Optical flow is traditionally computed from a sequence of flat images. It is the purpose of this paper to introduce variational motion estimation for images that are defined on an evolving surface. Volumetric microscopy images depicting a live zebrafish embryo serve as both biological motivation and test data.