Martin Weyssow

Martin Weyssow, Xin Zhou, Kisub Kim et al.

Large language models (LLMs) demonstrate impressive capabilities to generate accurate code snippets given natural language intents in a zero-shot manner, i.e., without the need for specific fine-tuning. While prior studies have highlighted the advantages of fine-tuning LLMs, this process incurs high computational costs, making it impractical in resource-scarce environments, particularly for models with billions of parameters. To address these challenges, previous research explored in-context learning (ICL) and retrieval-augmented generation (RAG) as strategies to guide the LLM generative process with task-specific prompt examples. However, ICL and RAG introduce inconveniences, such as the need for designing contextually relevant prompts and the absence of learning task-specific parameters, thereby limiting downstream task performance. In this context, we foresee parameter-efficient fine-tuning (PEFT) as a promising approach to efficiently specialize LLMs to task-specific data while maintaining reasonable resource consumption. In this paper, we deliver a comprehensive study of PEFT techniques for LLMs in the context of automated code generation. Our comprehensive investigation of PEFT techniques for LLMs reveals their superiority and potential over ICL and RAG across a diverse set of LLMs and three representative Python code generation datasets: Conala, CodeAlpacaPy, and APPS. Furthermore, our study highlights the potential for tuning larger LLMs and significant reductions in memory usage by combining PEFT with quantization. Therefore, this study opens opportunities for broader applications of PEFT in software engineering scenarios. Our code is available at https://github.com/martin-wey/peft-llm-code/.

José Antonio Hernández López, Martin Weyssow, Jesús Sánchez Cuadrado et al.

The objective of pre-trained language models is to learn contextual representations of textual data. Pre-trained language models have become mainstream in natural language processing and code modeling. Using probes, a technique to study the linguistic properties of hidden vector spaces, previous works have shown that these pre-trained language models encode simple linguistic properties in their hidden representations. However, none of the previous work assessed whether these models encode the whole grammatical structure of a programming language. In this paper, we prove the existence of a syntactic subspace, lying in the hidden representations of pre-trained language models, which contain the syntactic information of the programming language. We show that this subspace can be extracted from the models' representations and define a novel probing method, the AST-Probe, that enables recovering the whole abstract syntax tree (AST) of an input code snippet. In our experimentations, we show that this syntactic subspace exists in five state-of-the-art pre-trained language models. In addition, we highlight that the middle layers of the models are the ones that encode most of the AST information. Finally, we estimate the optimal size of this syntactic subspace and show that its dimension is substantially lower than those of the models' representation spaces. This suggests that pre-trained language models use a small part of their representation spaces to encode syntactic information of the programming languages.

Martin Weyssow, Claudio Di Sipio, Davide Di Ruscio et al.

Motivated by recent work on lifelong learning applications for language models (LMs) of code, we introduce CodeLL, a lifelong learning dataset focused on code changes. Our contribution addresses a notable research gap marked by the absence of a long-term temporal dimension in existing code change datasets, limiting their suitability in lifelong learning scenarios. In contrast, our dataset aims to comprehensively capture code changes across the entire release history of open-source software repositories. In this work, we introduce an initial version of CodeLL, comprising 71 machine-learning-based projects mined from Software Heritage. This dataset enables the extraction and in-depth analysis of code changes spanning 2,483 releases at both the method and API levels. CodeLL enables researchers studying the behaviour of LMs in lifelong fine-tuning settings for learning code changes. Additionally, the dataset can help studying data distribution shifts within software repositories and the evolution of API usages over time.

Xin Zhou, Martin Weyssow, Ratnadira Widyasari et al.

Large Language Models (LLMs) are widely utilized in software engineering (SE) tasks, such as code generation and automated program repair. However, their reliance on extensive and often undisclosed pre-training datasets raises significant concerns about data leakage, where the evaluation benchmark data is unintentionally ``seen'' by LLMs during the model's construction phase. The data leakage issue could largely undermine the validity of LLM-based research and evaluations. Despite the increasing use of LLMs in the SE community, there is no comprehensive study that assesses the extent of data leakage in SE benchmarks for LLMs yet. To address this gap, this paper presents the first large-scale analysis of data leakage in 83 SE benchmarks concerning LLMs. Our results show that in general, data leakage in SE benchmarks is minimal, with average leakage ratios of only 4.8\%, 2.8\%, and 0.7\% for Python, Java, and C/C++ benchmarks, respectively. However, some benchmarks exhibit relatively higher leakage ratios, which raises concerns about their bias in evaluation. For instance, QuixBugs and BigCloneBench have leakage ratios of 100.0\% and 55.7\%, respectively. Furthermore, we observe that data leakage has a substantial impact on LLM evaluation. We also identify key causes of high data leakage, such as the direct inclusion of benchmark data in pre-training datasets and the use of coding platforms like LeetCode for benchmark construction. To address the data leakage, we introduce \textbf{LessLeak-Bench}, a new benchmark that removes leaked samples from the 83 SE benchmarks, enabling more reliable LLM evaluations in future research. Our study enhances the understanding of data leakage in SE benchmarks and provides valuable insights for future research involving LLMs in SE.

Xin Zhou, Kisub Kim, Ting Zhang et al.

Large Language Models (LLMs) and other automated techniques have been increasingly used to support software developers by generating software artifacts such as code snippets, patches, and comments. However, accurately assessing the correctness of these generated artifacts remains a significant challenge. On one hand, human evaluation provides high accuracy but is labor-intensive and lacks scalability. On the other hand, many automatic evaluation metrics are scalable and require minimal human effort, but they often fail to accurately reflect the actual correctness of generated software artifacts. In this paper, we present SE-Jury, the first evaluation metric for LLM-as-Ensemble-Judge specifically designed to accurately assess the correctness of generated software artifacts. SE-Jury first defines five distinct evaluation strategies, each implemented by an independent judge. A dynamic team selection mechanism then identifies the most appropriate subset of judges as a team to produce a final correctness score through ensembling. We evaluate SE-Jury across a diverse set of software engineering (SE) benchmarks that span three popular SE tasks: code generation, automated program repair, and code summarization. Results demonstrate that SE-Jury consistently achieves a higher correlation with human judgments, with improvements ranging from 29.6% to 140.8% over existing automatic metrics. SE-Jury reaches agreement levels with human annotators that are close to inter-annotator agreement in code generation and program repair. These findings underscore SE-Jury's potential as a scalable and reliable alternative to human evaluation in these SE tasks.

Martin Weyssow, Chengran Yang, Junkai Chen et al.

Large language models (LLMs) have shown promising performance in software vulnerability detection, yet their reasoning capabilities remain unreliable. We propose R2Vul, a method that combines reinforcement learning from AI feedback (RLAIF) and structured reasoning distillation to teach small code LLMs to detect vulnerabilities while generating security-aware explanations. Unlike prior chain-of-thought and instruction tuning approaches, R2Vul rewards well-founded over deceptively plausible vulnerability explanations through RLAIF, which results in more precise detection and high-quality reasoning generation. To support RLAIF, we construct the first multilingual preference dataset for vulnerability detection, comprising 18,000 high-quality samples in C\#, JavaScript, Java, Python, and C. We evaluate R2Vul across five programming languages and against four static analysis tools, eight state-of-the-art LLM-based baselines, and various fine-tuning approaches. Our results demonstrate that a 1.5B R2Vul model exceeds the performance of its 32B teacher model and leading commercial LLMs such as Claude-4-Opus. Furthermore, we introduce a lightweight calibration step that reduces false positive rates under varying imbalanced data distributions. Finally, through qualitative analysis, we show that both LLM and human evaluators consistently rank R2Vul model's reasoning higher than other reasoning-based baselines.

Martin Weyssow, Aton Kamanda, Xin Zhou et al.

Evaluating the alignment of large language models (LLMs) with user-defined coding preferences is a challenging endeavour that requires a deep assessment of LLMs' outputs. Existing methods and benchmarks rely primarily on automated metrics and static analysis tools, which often fail to capture the nuances of user instructions and LLM outputs. To address this gap, we propose using the LLM-as-a-Judge methodology to evaluate the alignment of LLMs with coding preferences. Based on this approach, we present CodeUltraFeedback, a comprehensive dataset designed to facilitate the evaluation and improvement of LLM alignment. CodeUltraFeedback consists of 10,000 coding instructions, each annotated with four responses generated from a diverse pool of 14 LLMs. These responses are ranked based on five distinct coding preferences using GPT-3.5 as a judge, providing both numerical scores and detailed textual feedback. Our analysis of CodeUltraFeedback reveals that responses from GPT-3.5 and GPT-4 are generally preferred over those from open-weight LLMs, highlighting significant differences in alignment between closed and open-weight models. In turn, we explore the usage of CodeUltraFeedback as feedback data to fine-tune and align CodeLlama-7B-Instruct using supervised fine-tuning (SFT) and reinforcement learning from AI feedback (RLAIF) with direct preference optimization (DPO). The resulting aligned CodeLlama-7B-Instruct model outperforms larger LLMs in terms of alignment with coding preferences and shows improved functional correctness on the HumanEval+ benchmark compared to the original instruct model. Therefore, our contributions bridge the gap in preference tuning of LLMs for code and set the stage for further advancements in model alignment and RLAIF in automated software engineering.

Martin Weyssow, Xin Zhou, Kisub Kim et al.

Pre-trained language models (PLMs) have become a prevalent technique in deep learning for code, utilizing a two-stage pre-training and fine-tuning procedure to acquire general knowledge about code and specialize in a variety of downstream tasks. However, the dynamic nature of software codebases poses a challenge to the effectiveness and robustness of PLMs. In particular, world-realistic scenarios potentially lead to significant differences between the distribution of the pre-training and test data, i.e., distribution shift, resulting in a degradation of the PLM's performance on downstream tasks. In this paper, we stress the need for adapting PLMs of code to software data whose distribution changes over time, a crucial problem that has been overlooked in previous works. The motivation of this work is to consider the PLM in a non-stationary environment, where fine-tuning data evolves over time according to a software evolution scenario. Specifically, we design a scenario where the model needs to learn from a stream of programs containing new, unseen APIs over time. We study two widely used PLM architectures, i.e., a GPT2 decoder and a RoBERTa encoder, on two downstream tasks, API call and API usage prediction. We demonstrate that the most commonly used fine-tuning technique from prior work is not robust enough to handle the dynamic nature of APIs, leading to the loss of previously acquired knowledge i.e., catastrophic forgetting. To address these issues, we implement five continual learning approaches, including replay-based and regularization-based methods. Our findings demonstrate that utilizing these straightforward methods effectively mitigates catastrophic forgetting in PLMs across both downstream tasks while achieving comparable or superior performance.

Martin Weyssow, Houari Sahraoui, Bang Liu

The progress made in code modeling has been tremendous in recent years thanks to the design of natural language processing learning approaches based on state-of-the-art model architectures. Nevertheless, we believe that the current state-of-the-art does not focus enough on the full potential that data may bring to a learning process in software engineering. Our vision articulates on the idea of leveraging multi-modal learning approaches to modeling the programming world. In this paper, we investigate one of the underlying idea of our vision whose objective based on concept graphs of identifiers aims at leveraging high-level relationships between domain concepts manipulated through particular language constructs. In particular, we propose to enhance an existing pretrained language model of code by joint-learning it with a graph neural network based on our concept graphs. We conducted a preliminary evaluation that shows gain of effectiveness of the models for code search using a simple joint-learning method and prompts us to further investigate our research vision.

Martin Weyssow, Houari Sahraoui, Eugene Syriani

The design of conceptually sound metamodels that embody proper semantics in relation to the application domain is particularly tedious in Model-Driven Engineering. As metamodels define complex relationships between domain concepts, it is crucial for a modeler to define these concepts thoroughly while being consistent with respect to the application domain. We propose an approach to assist a modeler in the design of a metamodel by recommending relevant domain concepts in several modeling scenarios. Our approach does not require to extract knowledge from the domain or to hand-design completion rules. Instead, we design a fully data-driven approach using a deep learning model that is able to abstract domain concepts by learning from both structural and lexical metamodel properties in a corpus of thousands of independent metamodels. We evaluate our approach on a test set containing 166 metamodels, unseen during the model training, with more than 5000 test samples. Our preliminary results show that the trained model is able to provide accurate top-$5$ lists of relevant recommendations for concept renaming scenarios. Although promising, the results are less compelling for the scenario of the iterative construction of the metamodel, in part because of the conservative strategy we use to evaluate the recommendations.