C. Lee Giles

Zeba Karishma, Shaurya Rohatgi, Kavya Shrinivas Puranik et al.

Most existing large-scale academic search engines are built to retrieve text-based information. However, there are no large-scale retrieval services for scientific figures and tables. One challenge for such services is understanding scientific figures' semantics, such as their types and purposes. A key obstacle is the need for datasets containing annotated scientific figures and tables, which can then be used for classification, question-answering, and auto-captioning. Here, we develop a pipeline that extracts figures and tables from the scientific literature and a deep-learning-based framework that classifies scientific figures using visual features. Using this pipeline, we built the first large-scale automatically annotated corpus, ACL-Fig, consisting of 112,052 scientific figures extracted from ~56K research papers in the ACL Anthology. The ACL-Fig-Pilot dataset contains 1,671 manually labeled scientific figures belonging to 19 categories. The dataset is accessible at https://huggingface.co/datasets/citeseerx/ACL-fig under a CC BY-NC license.

Tatiana Chakravorti, Robert Fraleigh, Timothy Fritton et al.

We present a prototype hybrid prediction market and demonstrate the avenue it represents for meaningful human-AI collaboration. We build on prior work proposing artificial prediction markets as a novel machine-learning algorithm. In an artificial prediction market, trained AI agents buy and sell outcomes of future events. Classification decisions can be framed as outcomes of future events, and accordingly, the price of an asset corresponding to a given classification outcome can be taken as a proxy for the confidence of the system in that decision. By embedding human participants in these markets alongside bot traders, we can bring together insights from both. In this paper, we detail pilot studies with prototype hybrid markets for the prediction of replication study outcomes. We highlight challenges and opportunities, share insights from semi-structured interviews with hybrid market participants, and outline a vision for ongoing and future work.

Ting-Yao Hsu, Chieh-Yang Huang, Ryan Rossi et al.

There is growing interest in systems that generate captions for scientific figures. However, assessing these systems output poses a significant challenge. Human evaluation requires academic expertise and is costly, while automatic evaluation depends on often low-quality author-written captions. This paper investigates using large language models (LLMs) as a cost-effective, reference-free method for evaluating figure captions. We first constructed SCICAP-EVAL, a human evaluation dataset that contains human judgments for 3,600 scientific figure captions, both original and machine-made, for 600 arXiv figures. We then prompted LLMs like GPT-4 and GPT-3 to score (1-6) each caption based on its potential to aid reader understanding, given relevant context such as figure-mentioning paragraphs. Results show that GPT-4, used as a zero-shot evaluator, outperformed all other models and even surpassed assessments made by Computer Science and Informatics undergraduates, achieving a Kendall correlation score of 0.401 with Ph.D. students rankings

Siyu Wu, Alessandro Oltramari, Jonathan Francis et al.

Resolving the dichotomy between the human-like yet constrained reasoning processes of Cognitive Architectures and the broad but often noisy inference behavior of Large Language Models (LLMs) remains a challenging but exciting pursuit, for enabling reliable machine reasoning capabilities in production systems. Because Cognitive Architectures are famously developed for the purpose of modeling the internal mechanisms of human cognitive decision-making at a computational level, new investigations consider the goal of informing LLMs with the knowledge necessary for replicating such processes, e.g., guided perception, memory, goal-setting, and action. Previous approaches that use LLMs for grounded decision-making struggle with complex reasoning tasks that require slower, deliberate cognition over fast and intuitive inference -- reporting issues related to the lack of sufficient grounding, as in hallucination. To resolve these challenges, we introduce LLM-ACTR, a novel neuro-symbolic architecture that provides human-aligned and versatile decision-making by integrating the ACT-R Cognitive Architecture with LLMs. Our framework extracts and embeds knowledge of ACT-R's internal decision-making process as latent neural representations, injects this information into trainable LLM adapter layers, and fine-tunes the LLMs for downstream prediction. Our experiments on novel Design for Manufacturing tasks show both improved task performance as well as improved grounded decision-making capability of our approach, compared to LLM-only baselines that leverage chain-of-thought reasoning strategies.

Tatiana Chakravorti, Robert Fraleigh, Timothy Fritton et al.

Determining whether published scientific findings can successfully be replicated is a long-standing challenge in the empirical sciences. Existing approaches for replicability assessment typically rely either on human judgment, i.e., creative assembly of human experts, or on machine learning models trained on paper content metadata. While both approaches have demonstrated value, each also has important limitations. Human forecasts can be influenced by cognitive biases and narrow exposure to the research literature, while automated assessments often struggle to capture contextual cues and subtle signals of credibility. In this paper, we examine a hybrid approach. Specifically, we introduce a hybrid prediction market in which algorithmic agents trade alongside human participants to jointly estimate the likelihood that a published scientific finding will be corroborated via the outcome of a controlled replication study. Agents are trained on outcomes from hundreds of prior replication studies while human participants contribute domain knowledge through real-time trading. We evaluate this hybrid approach through multiple live experiments involving participants from different academic disciplines and compare its performance to artificial-only and human-only baselines. Our results show that, except for a few cases, hybrid markets match or outperform artificial prediction markets, producing more accurate and reliable replication forecasts.

Ting-Hao 'Kenneth' Huang, Ryan A. Rossi, Sungchul Kim et al.

Between 2021 and 2025, the SciCap project grew from a small seed-funded idea at The Pennsylvania State University (Penn State) into one of the central efforts shaping the scientific figure-captioning landscape. Supported by a Penn State seed grant, Adobe, and the Alfred P. Sloan Foundation, what began as our attempt to test whether domain-specific training, which was successful in text models like SciBERT, could also work for figure captions expanded into a multi-institution collaboration. Over these five years, we curated, released, and continually updated a large collection of figure-caption pairs from arXiv papers, conducted extensive automatic and human evaluations on both generated and author-written captions, navigated the rapid rise of large language models (LLMs), launched annual challenges, and built interactive systems that help scientists write better captions. In this piece, we look back at the first five years of SciCap and summarize the key technical and methodological lessons we learned. We then outline five major unsolved challenges and propose directions for the next phase of research in scientific figure captioning.

Neisarg Dave, Daniel Kifer, C. Lee Giles et al.

Prompting techniques have significantly enhanced the capabilities of Large Language Models (LLMs) across various complex tasks, including reasoning, planning, and solving math word problems. However, most research has predominantly focused on language-based reasoning and word problems, often overlooking the potential of LLMs in handling symbol-based calculations and reasoning. This study aims to bridge this gap by rigorously evaluating LLMs on a series of symbolic tasks, such as addition, multiplication, modulus arithmetic, numerical precision, and symbolic counting. Our analysis encompasses eight LLMs, including four enterprise-grade and four open-source models, of which three have been pre-trained on mathematical tasks. The assessment framework is anchored in Chomsky's Hierarchy, providing a robust measure of the computational abilities of these models. The evaluation employs minimally explained prompts alongside the zero-shot Chain of Thoughts technique, allowing models to navigate the solution process autonomously. The findings reveal a significant decline in LLMs' performance on context-free and context-sensitive symbolic tasks as the complexity, represented by the number of symbols, increases. Notably, even the fine-tuned GPT3.5 exhibits only marginal improvements, mirroring the performance trends observed in other models. Across the board, all models demonstrated a limited generalization ability on these symbol-intensive tasks. This research underscores LLMs' challenges with increasing symbolic complexity and highlights the need for specialized training, memory and architectural adjustments to enhance their proficiency in symbol-based reasoning tasks.

Jian Wu, Rajal Nivargi, Sree Sai Teja Lanka et al.

In recent years, significant effort has been invested verifying the reproducibility and robustness of research claims in social and behavioral sciences (SBS), much of which has involved resource-intensive replication projects. In this paper, we investigate prediction of the reproducibility of SBS papers using machine learning methods based on a set of features. We propose a framework that extracts five types of features from scholarly work that can be used to support assessments of reproducibility of published research claims. Bibliometric features, venue features, and author features are collected from public APIs or extracted using open source machine learning libraries with customized parsers. Statistical features, such as p-values, are extracted by recognizing patterns in the body text. Semantic features, such as funding information, are obtained from public APIs or are extracted using natural language processing models. We analyze pairwise correlations between individual features and their importance for predicting a set of human-assessed ground truth labels. In doing so, we identify a subset of 9 top features that play relatively more important roles in predicting the reproducibility of SBS papers in our corpus. Results are verified by comparing performances of 10 supervised predictive classifiers trained on different sets of features.

Nishanth Nakshatri, Arjun Menon, C. Lee Giles et al.

We present a synthetic prediction market whose agent purchase logic is defined using a sigmoid transformation of a convex semi-algebraic set defined in feature space. Asset prices are determined by a logarithmic scoring market rule. Time varying asset prices affect the structure of the semi-algebraic sets leading to time-varying agent purchase rules. We show that under certain assumptions on the underlying geometry, the resulting synthetic prediction market can be used to arbitrarily closely approximate a binary function defined on a set of input data. We also provide sufficient conditions for market convergence and show that under certain instances markets can exhibit limit cycles in asset spot price. We provide an evolutionary algorithm for training agent parameters to allow a market to model the distribution of a given data set and illustrate the market approximation using two open source data sets. Results are compared to standard machine learning methods.

Anand Gopalakrishnan, Ankur Mali, Dan Kifer et al.

We propose novel neural temporal models for predicting and synthesizing human motion, achieving state-of-the-art in modeling long-term motion trajectories while being competitive with prior work in short-term prediction and requiring significantly less computation. Key aspects of our proposed system include: 1) a novel, two-level processing architecture that aids in generating planned trajectories, 2) a simple set of easily computable features that integrate derivative information, and 3) a novel multi-objective loss function that helps the model to slowly progress from simple next-step prediction to the harder task of multi-step, closed-loop prediction. Our results demonstrate that these innovations improve the modeling of long-term motion trajectories. Finally, we propose a novel metric, called Normalized Power Spectrum Similarity (NPSS), to evaluate the long-term predictive ability of motion synthesis models, complementing the popular mean-squared error (MSE) measure of Euler joint angles over time. We conduct a user study to determine if the proposed NPSS correlates with human evaluation of long-term motion more strongly than MSE and find that it indeed does. We release code and additional results (visualizations) for this paper at: https://github.com/cr7anand/neural_temporal_models

Agnese Chiatti, Mu Jung Cho, Anupriya Gagneja et al.

Daily engagement in life experiences is increasingly interwoven with mobile device use. Screen capture at the scale of seconds is being used in behavioral studies and to implement "just-in-time" health interventions. The increasing psychological breadth of digital information will continue to make the actual screens that people view a preferred if not required source of data about life experiences. Effective and efficient Information Extraction and Retrieval from digital screenshots is a crucial prerequisite to successful use of screen data. In this paper, we present the experimental workflow we exploited to: (i) pre-process a unique collection of screen captures, (ii) extract unstructured text embedded in the images, (iii) organize image text and metadata based on a structured schema, (iv) index the resulting document collection, and (v) allow for Image Retrieval through a dedicated vertical search engine application. The adopted procedure integrates different open source libraries for traditional image processing, Optical Character Recognition (OCR), and Image Retrieval. Our aim is to assess whether and how state-of-the-art methodologies can be applied to this novel data set. We show how combining OpenCV-based pre-processing modules with a Long short-term memory (LSTM) based release of Tesseract OCR, without ad hoc training, led to a 74% character-level accuracy of the extracted text. Further, we used the processed repository as baseline for a dedicated Image Retrieval system, for the immediate use and application for behavioral and prevention scientists. We discuss issues of Text Information Extraction and Retrieval that are particular to the screenshot image case and suggest important future work.

Ting-Yao Hsu, Chieh-Yang Huang, Shih-Hong Huang et al.

Crafting effective captions for figures is important. Readers heavily depend on these captions to grasp the figure's message. However, despite a well-developed set of AI technologies for figures and captions, these have rarely been tested for usefulness in aiding caption writing. This paper introduces SciCapenter, an interactive system that puts together cutting-edge AI technologies for scientific figure captions to aid caption composition. SciCapenter generates a variety of captions for each figure in a scholarly article, providing scores and a comprehensive checklist to assess caption quality across multiple critical aspects, such as helpfulness, OCR mention, key takeaways, and visual properties reference. Users can directly edit captions in SciCapenter, resubmit for revised evaluations, and iteratively refine them. A user study with Ph.D. students indicates that SciCapenter significantly lowers the cognitive load of caption writing. Participants' feedback further offers valuable design insights for future systems aiming to enhance caption writing.

Neisarg Dave, Daniel Kifer, C. Lee Giles et al.

This paper analyzes two competing rule extraction methodologies: quantization and equivalence query. We trained $3600$ RNN models, extracting $18000$ DFA with a quantization approach (k-means and SOM) and $3600$ DFA by equivalence query($L^{*}$) methods across $10$ initialization seeds. We sampled the datasets from $7$ Tomita and $4$ Dyck grammars and trained them on $4$ RNN cells: LSTM, GRU, O2RNN, and MIRNN. The observations from our experiments establish the superior performance of O2RNN and quantization-based rule extraction over others. $L^{*}$, primarily proposed for regular grammars, performs similarly to quantization methods for Tomita languages when neural networks are perfectly trained. However, for partially trained RNNs, $L^{*}$ shows instability in the number of states in DFA, e.g., for Tomita 5 and Tomita 6 languages, $L^{*}$ produced more than $100$ states. In contrast, quantization methods result in rules with number of states very close to ground truth DFA. Among RNN cells, O2RNN produces stable DFA consistently compared to other cells. For Dyck Languages, we observe that although GRU outperforms other RNNs in network performance, the DFA extracted by O2RNN has higher performance and better stability. The stability is computed as the standard deviation of accuracy on test sets on networks trained across $10$ seeds. On Dyck Languages, quantization methods outperformed $L^{*}$ with better stability in accuracy and the number of states. $L^{*}$ often showed instability in accuracy in the order of $16\% - 22\%$ for GRU and MIRNN while deviation for quantization methods varied in $5\% - 15\%$. In many instances with LSTM and GRU, DFA's extracted by $L^{*}$ even failed to beat chance accuracy ($50\%$), while those extracted by quantization method had standard deviation in the $7\%-17\%$ range. For O2RNN, both rule extraction methods had deviation in the $0.5\% - 3\%$ range.

Ting-Yao E. Hsu, Yi-Li Hsu, Shaurya Rohatgi et al.

Since the SciCap datasets launch in 2021, the research community has made significant progress in generating captions for scientific figures in scholarly articles. In 2023, the first SciCap Challenge took place, inviting global teams to use an expanded SciCap dataset to develop models for captioning diverse figure types across various academic fields. At the same time, text generation models advanced quickly, with many powerful pre-trained large multimodal models (LMMs) emerging that showed impressive capabilities in various vision-and-language tasks. This paper presents an overview of the first SciCap Challenge and details the performance of various models on its data, capturing a snapshot of the fields state. We found that professional editors overwhelmingly preferred figure captions generated by GPT-4V over those from all other models and even the original captions written by authors. Following this key finding, we conducted detailed analyses to answer this question: Have advanced LMMs solved the task of generating captions for scientific figures?

Mukund Srinath, Pranav Venkit, Maria Badillo et al.

Privacy policies are crucial for informing users about data practices, yet their length and complexity often deter users from reading them. In this paper, we propose an automated approach to identify and visualize data practices within privacy policies at different levels of detail. Leveraging crowd-sourced annotations from the ToS;DR platform, we experiment with various methods to match policy excerpts with predefined data practice descriptions. We further conduct a case study to evaluate our approach on a real-world policy, demonstrating its effectiveness in simplifying complex policies. Experiments show that our approach accurately matches data practice descriptions with policy excerpts, facilitating the presentation of simplified privacy information to users.

Debdeep Sanyal, Agniva Maiti, Umakanta Maharana et al.

Effective teaching requires adapting instructional strategies to accommodate the diverse cognitive and behavioral profiles of students, a persistent challenge in education and teacher training. While Large Language Models (LLMs) offer promise as tools to simulate such complex pedagogical environments, current simulation frameworks are limited in two key respects: (1) they often reduce students to static knowledge profiles, and (2) they lack adaptive mechanisms for modeling teachers who evolve their strategies in response to student feedback. To address these gaps, \textbf{we introduce a novel simulation framework that integrates LLM-based heterogeneous student agents with a self-optimizing teacher agent}. The teacher agent's pedagogical policy is dynamically evolved using a genetic algorithm, allowing it to discover and refine effective teaching strategies based on the aggregate performance of diverse learners. In addition, \textbf{we propose Persona-RAG}, a Retrieval Augmented Generation module that enables student agents to retrieve knowledge tailored to their individual learning styles. Persona-RAG preserves the retrieval accuracy of standard RAG baselines while enhancing personalization, an essential factor in modeling realistic educational scenarios. Through extensive experiments, we demonstrate how our framework supports the emergence of distinct and interpretable teaching patterns when interacting with varied student populations. Our results highlight the potential of LLM-driven simulations to inform adaptive teaching practices and provide a testbed for training human educators in controlled, data-driven environments.

Levent Toksoz, Gang Tan, C. Lee Giles

Pseudocode in a scholarly paper provides a concise way to express the algorithms implemented therein. Pseudocode can also be thought of as an intermediary representation that helps bridge the gap between programming languages and natural languages. Having access to a large collection of pseudocode can provide various benefits ranging from enhancing algorithmic understanding, facilitating further algorithmic design, to empowering NLP or computer vision based models for tasks such as automated code generation and optical character recognition (OCR). We have created a large pseudocode collection by extracting nearly 320,000 pseudocode examples from arXiv papers. This process involved scanning over $2.2$ million scholarly papers, with 1,000 of them being manually inspected and labeled. Our approach encompasses an extraction mechanism tailored to optimize the coverage and a validation mechanism based on random sampling to check its accuracy and reliability, given the inherent heterogeneity of the collection. In addition, we offer insights into common pseudocode structures, supported by clustering and statistical analyses. Notably, these analyses indicate an exponential-like growth in the usage of pseudocodes, highlighting their increasing significance.

Sarah Rajtmajer, Christopher Griffin, Jian Wu et al.

Explainably estimating confidence in published scholarly work offers opportunity for faster and more robust scientific progress. We develop a synthetic prediction market to assess the credibility of published claims in the social and behavioral sciences literature. We demonstrate our system and detail our findings using a collection of known replication projects. We suggest that this work lays the foundation for a research agenda that creatively uses AI for peer review.

Ting-Yao Hsu, C. Lee Giles, Ting-Hao 'Kenneth' Huang

Researchers use figures to communicate rich, complex information in scientific papers. The captions of these figures are critical to conveying effective messages. However, low-quality figure captions commonly occur in scientific articles and may decrease understanding. In this paper, we propose an end-to-end neural framework to automatically generate informative, high-quality captions for scientific figures. To this end, we introduce SCICAP, a large-scale figure-caption dataset based on computer science arXiv papers published between 2010 and 2020. After pre-processing - including figure-type classification, sub-figure identification, text normalization, and caption text selection - SCICAP contained more than two million figures extracted from over 290,000 papers. We then established baseline models that caption graph plots, the dominant (19.2%) figure type. The experimental results showed both opportunities and steep challenges of generating captions for scientific figures.

Meng Ling, Jian Chen, Torsten Möller et al.

We present document domain randomization (DDR), the first successful transfer of convolutional neural networks (CNNs) trained only on graphically rendered pseudo-paper pages to real-world document segmentation. DDR renders pseudo-document pages by modeling randomized textual and non-textual contents of interest, with user-defined layout and font styles to support joint learning of fine-grained classes. We demonstrate competitive results using our DDR approach to extract nine document classes from the benchmark CS-150 and papers published in two domains, namely annual meetings of Association for Computational Linguistics (ACL) and IEEE Visualization (VIS). We compare DDR to conditions of style mismatch, fewer or more noisy samples that are more easily obtained in the real world. We show that high-fidelity semantic information is not necessary to label semantic classes but style mismatch between train and test can lower model accuracy. Using smaller training samples had a slightly detrimental effect. Finally, network models still achieved high test accuracy when correct labels are diluted towards confusing labels; this behavior hold across several classes.

Ankur Mali, Alexander Ororbia, Daniel Kifer et al.

Automated mathematical reasoning is a challenging problem that requires an agent to learn algebraic patterns that contain long-range dependencies. Two particular tasks that test this type of reasoning are (1) mathematical equation verification, which requires determining whether trigonometric and linear algebraic statements are valid identities or not, and (2) equation completion, which entails filling in a blank within an expression to make it true. Solving these tasks with deep learning requires that the neural model learn how to manipulate and compose various algebraic symbols, carrying this ability over to previously unseen expressions. Artificial neural networks, including recurrent networks and transformers, struggle to generalize on these kinds of difficult compositional problems, often exhibiting poor extrapolation performance. In contrast, recursive neural networks (recursive-NNs) are, theoretically, capable of achieving better extrapolation due to their tree-like design but are difficult to optimize as the depth of their underlying tree structure increases. To overcome this issue, we extend recursive-NNs to utilize multiplicative, higher-order synaptic connections and, furthermore, to learn to dynamically control and manipulate an external memory. We argue that this key modification gives the neural system the ability to capture powerful transition functions for each possible input. We demonstrate the effectiveness of our proposed higher-order, memory-augmented recursive-NN models on two challenging mathematical equation tasks, showing improved extrapolation, stable performance, and faster convergence. Our models achieve a 1.53% average improvement over current state-of-the-art methods in equation verification and achieve a 2.22% Top-1 average accuracy and 2.96% Top-5 average accuracy for equation completion.

Xiaoxiao Li, Rabah Al-Zaidy, Amy Zhang et al.

Objective: Systematic reviews of scholarly documents often provide complete and exhaustive summaries of literature relevant to a research question. However, well-done systematic reviews are expensive, time-demanding, and labor-intensive. Here, we propose an automatic document classification approach to significantly reduce the effort in reviewing documents. Methods: We first describe a manual document classification procedure that is used to curate a pertinent training dataset and then propose three classifiers: a keyword-guided method, a cluster analysis-based refined method, and a random forest approach that utilizes a large set of feature tokens. As an example, this approach is used to identify documents studying female sex workers that are assumed to contain content relevant to either HIV or violence. We compare the performance of the three classifiers by cross-validation and conduct a sensitivity analysis on the portion of data utilized in training the model. Results: The random forest approach provides the highest area under the curve (AUC) for both receiver operating characteristic (ROC) and precision/recall (PR). Analyses of precision and recall suggest that random forest could facilitate manually reviewing 20\% of the articles while containing 80\% of the relevant cases. Finally, we found a good classifier could be obtained by using a relatively small training sample size. Conclusions: In sum, the automated procedure of document classification presented here could improve both the precision and efficiency of systematic reviews, as well as facilitating live reviews, where reviews are updated regularly.

Yasith Jayawardana, Alexander C. Nwala, Gavindya Jayawardena et al.

The vastness of the web imposes a prohibitive cost on building large-scale search engines with limited resources. Crawl frontiers thus need to be optimized to improve the coverage and freshness of crawled content. In this paper, we propose an approach for modeling the dynamics of change in the web using archived copies of webpages. To evaluate its utility, we conduct a preliminary study on the scholarly web using 19,977 seed URLs of authors' homepages obtained from their Google Scholar profiles. We first obtain archived copies of these webpages from the Internet Archive (IA), and estimate when their actual updates occurred. Next, we apply maximum likelihood to estimate their mean update frequency ($λ$) values. Our evaluation shows that $λ$ values derived from a short history of archived data provide a good estimate for the true update frequency in the short-term, and that our method provides better estimations of updates at a fraction of resources compared to the baseline models. Based on this, we demonstrate the utility of archived data to optimize the crawling strategy of web crawlers, and uncover important challenges that inspire future research directions.

Ting-Hao 'Kenneth' Huang, Chieh-Yang Huang, Chien-Kuang Cornelia Ding et al.

This paper introduces CODA-19, a human-annotated dataset that codes the Background, Purpose, Method, Finding/Contribution, and Other sections of 10,966 English abstracts in the COVID-19 Open Research Dataset. CODA-19 was created by 248 crowd workers from Amazon Mechanical Turk within 10 days, and achieved labeling quality comparable to that of experts. Each abstract was annotated by nine different workers, and the final labels were acquired by majority vote. The inter-annotator agreement (Cohen's kappa) between the crowd and the biomedical expert (0.741) is comparable to inter-expert agreement (0.788). CODA-19's labels have an accuracy of 82.2% when compared to the biomedical expert's labels, while the accuracy between experts was 85.0%. Reliable human annotations help scientists access and integrate the rapidly accelerating coronavirus literature, and also serve as the battery of AI/NLP research, but obtaining expert annotations can be slow. We demonstrated that a non-expert crowd can be rapidly employed at scale to join the fight against COVID-19.

Mukund Srinath, Shomir Wilson, C. Lee Giles

Organisations disclose their privacy practices by posting privacy policies on their website. Even though users often care about their digital privacy, they often don't read privacy policies since they require a significant investment in time and effort. Although natural language processing can help in privacy policy understanding, there has been a lack of large scale privacy policy corpora that could be used to analyse, understand, and simplify privacy policies. Thus, we create PrivaSeer, a corpus of over one million English language website privacy policies, which is significantly larger than any previously available corpus. We design a corpus creation pipeline which consists of crawling the web followed by filtering documents using language detection, document classification, duplicate and near-duplication removal, and content extraction. We investigate the composition of the corpus and show results from readability tests, document similarity, keyphrase extraction, and explored the corpus through topic modeling.

Alexander Ororbia, Ankur Mali, Daniel Kifer et al.

Training deep neural networks on large-scale datasets requires significant hardware resources whose costs (even on cloud platforms) put them out of reach of smaller organizations, groups, and individuals. Backpropagation, the workhorse for training these networks, is an inherently sequential process that is difficult to parallelize. Furthermore, it requires researchers to continually develop various tricks, such as specialized weight initializations and activation functions, in order to ensure a stable parameter optimization. Our goal is to seek an effective, neuro-biologically-plausible alternative to backprop that can be used to train deep networks. In this paper, we propose a gradient-free learning procedure, recursive local representation alignment, for training large-scale neural architectures. Experiments with residual networks on CIFAR-10 and the large benchmark, ImageNet, show that our algorithm generalizes as well as backprop while converging sooner due to weight updates that are parallelizable and computationally less demanding. This is empirical evidence that a backprop-free algorithm can scale up to larger datasets.

Shaurya Rohatgi, Wei Zhong, Richard Zanibbi et al.

Query Auto Completion (QAC) is among the most appealing features of a web search engine. It helps users formulate queries quickly with less effort. Although there has been much effort in this area for text, to the best of our knowledge there is few work on mathematical formula auto completion. In this paper, we implement 5 existing QAC methods on mathematical formula and evaluate them on the NTCIR-12 MathIR task dataset. We report the efficiency of retrieved results using Mean Reciprocal Rank (MRR) and Mean Average Precision(MAP). Our study indicates that the Finite State Transducer outperforms other QAC models with a MRR score of $0.642$.

Ke Yuan, Dafang He, Zhuoren Jiang et al.

Mathematical equations are an important part of dissemination and communication of scientific information. Students, however, often feel challenged in reading and understanding math content and equations. With the development of the Web, students are posting their math questions online. Nevertheless, constructing a concise math headline that gives a good description of the posted detailed math question is nontrivial. In this study, we explore a novel summarization task denoted as geNerating A concise Math hEadline from a detailed math question (NAME). Compared to conventional summarization tasks, this task has two extra and essential constraints: 1) Detailed math questions consist of text and math equations which require a unified framework to jointly model textual and mathematical information; 2) Unlike text, math equations contain semantic and structural features, and both of them should be captured together. To address these issues, we propose MathSum, a novel summarization model which utilizes a pointer mechanism combined with a multi-head attention mechanism for mathematical representation augmentation. The pointer mechanism can either copy textual tokens or math tokens from source questions in order to generate math headlines. The multi-head attention mechanism is designed to enrich the representation of math equations by modeling and integrating both its semantic and structural features. For evaluation, we collect and make available two sets of real-world detailed math questions along with human-written math headlines, namely EXEQ-300k and OFEQ-10k. Experimental results demonstrate that our model (MathSum) significantly outperforms state-of-the-art models for both the EXEQ-300k and OFEQ-10k datasets.

Qinglong Wang, Kaixuan Zhang, Xue Liu et al.

We propose an approach that connects recurrent networks with different orders of hidden interaction with regular grammars of different levels of complexity. We argue that the correspondence between recurrent networks and formal computational models gives understanding to the analysis of the complicated behaviors of recurrent networks. We introduce an entropy value that categorizes all regular grammars into three classes with different levels of complexity, and show that several existing recurrent networks match grammars from either all or partial classes. As such, the differences between regular grammars reveal the different properties of these models. We also provide a unification of all investigated recurrent networks. Our evaluation shows that the unified recurrent network has improved performance in learning grammars, and demonstrates comparable performance on a real-world dataset with more complicated models.

Kaixuan Zhang, Qinglong Wang, Xue Liu et al.

Data samples collected for training machine learning models are typically assumed to be independent and identically distributed (iid). Recent research has demonstrated that this assumption can be problematic as it simplifies the manifold of structured data. This has motivated different research areas such as data poisoning, model improvement, and explanation of machine learning models. In this work, we study the influence of a sample on determining the intrinsic topological features of its underlying manifold. We propose the Shapley Homology framework, which provides a quantitative metric for the influence of a sample of the homology of a simplicial complex. By interpreting the influence as a probability measure, we further define an entropy which reflects the complexity of the data manifold. Our empirical studies show that when using the 0-dimensional homology, on neighboring graphs, samples with higher influence scores have more impact on the accuracy of neural networks for determining the graph connectivity and on several regular grammars whose higher entropy values imply more difficulty in being learned.

Ankur Mali, Alexander Ororbia, C. Lee Giles

In order to learn complex grammars, recurrent neural networks (RNNs) require sufficient computational resources to ensure correct grammar recognition. A widely-used approach to expand model capacity would be to couple an RNN to an external memory stack. Here, we introduce a "neural state" pushdown automaton (NSPDA), which consists of a digital stack, instead of an analog one, that is coupled to a neural network state machine. We empirically show its effectiveness in recognizing various context-free grammars (CFGs). First, we develop the underlying mechanics of the proposed higher order recurrent network and its manipulation of a stack as well as how to stably program its underlying pushdown automaton (PDA) to achieve desired finite-state network dynamics. Next, we introduce a noise regularization scheme for higher-order (tensor) networks, to our knowledge the first of its kind, and design an algorithm for improved incremental learning. Finally, we design a method for inserting grammar rules into a NSPDA and empirically show that this prior knowledge improves its training convergence time by an order of magnitude and, in some cases, leads to better generalization. The NSPDA is also compared to a classical analog stack neural network pushdown automaton (NNPDA) as well as a wide array of first and second-order RNNs with and without external memory, trained using different learning algorithms. Our results show that, for Dyck(2) languages, prior rule-based knowledge is critical for optimization convergence and for ensuring generalization to longer sequences at test time. We observe that many RNNs with and without memory, but no prior knowledge, fail to converge and generalize poorly on CFGs.

Athar Sefid, Jian Wu, Allen C. Ge et al.

Automatically extracted metadata from scholarly documents in PDF formats is usually noisy and heterogeneous, often containing incomplete fields and erroneous values. One common way of cleaning metadata is to use a bibliographic reference dataset. The challenge is to match records between corpora with high precision. The existing solution which is based on information retrieval and string similarity on titles works well only if the titles are cleaned. We introduce a system designed to match scholarly document entities with noisy metadata against a reference dataset. The blocking function uses the classic BM25 algorithm to find the matching candidates from the reference data that has been indexed by ElasticSearch. The core components use supervised methods which combine features extracted from all available metadata fields. The system also leverages available citation information to match entities. The combination of metadata and citation achieves high accuracy that significantly outperforms the baseline method on the same test dataset. We apply this system to match the database of CiteSeerX against Web of Science, PubMed, and DBLP. This method will be deployed in the CiteSeerX system to clean metadata and link records to other scholarly big datasets.

Alexander Ororbia, Ankur Mali, Daniel Kifer et al.

In lifelong learning systems based on artificial neural networks, one of the biggest obstacles is the inability to retain old knowledge as new information is encountered. This phenomenon is known as catastrophic forgetting. In this paper, we propose a new kind of connectionist architecture, the Sequential Neural Coding Network, that is robust to forgetting when learning from streams of data points and, unlike networks of today, does not learn via the popular back-propagation of errors. Grounded in the neurocognitive theory of predictive processing, our model adapts synapses in a biologically-plausible fashion while another neural system learns to direct and control this cortex-like structure, mimicking some of the task-executive control functionality of the basal ganglia. In our experiments, we demonstrate that our self-organizing system experiences significantly less forgetting compared to standard neural models, outperforming a swath of previously proposed methods, including rehearsal/data buffer-based methods, on both standard (SplitMNIST, Split Fashion MNIST, etc.) and custom benchmarks even though it is trained in a stream-like fashion. Our work offers evidence that emulating mechanisms in real neuronal systems, e.g., local learning, lateral competition, can yield new directions and possibilities for tackling the grand challenge of lifelong machine learning.

Qinglong Wang, Kaixuan Zhang, Xue Liu et al.

The verification problem for neural networks is verifying whether a neural network will suffer from adversarial samples, or approximating the maximal allowed scale of adversarial perturbation that can be endured. While most prior work contributes to verifying feed-forward networks, little has been explored for verifying recurrent networks. This is due to the existence of a more rigorous constraint on the perturbation space for sequential data, and the lack of a proper metric for measuring the perturbation. In this work, we address these challenges by proposing a metric which measures the distance between strings, and use deterministic finite automata (DFA) to represent a rigorous oracle which examines if the generated adversarial samples violate certain constraints on a perturbation. More specifically, we empirically show that certain recurrent networks allow relatively stable DFA extraction. As such, DFAs extracted from these recurrent networks can serve as a surrogate oracle for when the ground truth DFA is unknown. We apply our verification mechanism to several widely used recurrent networks on a set of the Tomita grammars. The results demonstrate that only a few models remain robust against adversarial samples. In addition, we show that for grammars with different levels of complexity, there is also a difference in the difficulty of robust learning of these grammars.

Alexander Ororbia, Ankur Mali, C. Lee Giles et al.

Temporal models based on recurrent neural networks have proven to be quite powerful in a wide variety of applications. However, training these models often relies on back-propagation through time, which entails unfolding the network over many time steps, making the process of conducting credit assignment considerably more challenging. Furthermore, the nature of back-propagation itself does not permit the use of non-differentiable activation functions and is inherently sequential, making parallelization of the underlying training process difficult. Here, we propose the Parallel Temporal Neural Coding Network (P-TNCN), a biologically inspired model trained by the learning algorithm we call Local Representation Alignment. It aims to resolve the difficulties and problems that plague recurrent networks trained by back-propagation through time. The architecture requires neither unrolling in time nor the derivatives of its internal activation functions. We compare our model and learning procedure to other back-propagation through time alternatives (which also tend to be computationally expensive), including real-time recurrent learning, echo state networks, and unbiased online recurrent optimization. We show that it outperforms these on sequence modeling benchmarks such as Bouncing MNIST, a new benchmark we denote as Bouncing NotMNIST, and Penn Treebank. Notably, our approach can in some instances outperform full back-propagation through time as well as variants such as sparse attentive back-tracking. Significantly, the hidden unit correction phase of P-TNCN allows it to adapt to new datasets even if its synaptic weights are held fixed (zero-shot adaptation) and facilitates retention of prior generative knowledge when faced with a task sequence. We present results that show the P-TNCN's ability to conduct zero-shot adaptation and online continual sequence modeling.

Dafang He, Xiao Yang, Daniel Kifer et al.

We study the problem of extracting text instance contour information from images and use it to assist scene text detection. We propose a novel and effective framework for this and experimentally demonstrate that: (1) A CNN that can be effectively used to extract instance-level text contour from natural images. (2) The extracted contour information can be used for better scene text detection. We propose two ways for learning the contour task together with the scene text detection: (1) as an auxiliary task and (2) as multi-task cascade. Extensive experiments with different benchmark datasets demonstrate that both designs improve the performance of a state-of-the-art scene text detector and that a multi-task cascade design achieves the best performance.

Dafang He, Yeqing Li, Alexander Gorban et al.

Many tasks are related to determining if a particular text string exists in an image. In this work, we propose a new framework that learns this task in an end-to-end way. The framework takes an image and a text string as input and then outputs the probability of the text string being present in the image. This is the first end-to-end framework that learns such relationships between text and images in scene text area. The framework does not require explicit scene text detection or recognition and thus no bounding box annotations are needed for it. It is also the first work in scene text area that tackles suh a weakly labeled problem. Based on this framework, we developed a model called Guided Attention. Our designed model achieves much better results than several state-of-the-art scene text reading based solutions for a challenging Street View Business Matching task. The task tries to find correct business names for storefront images and the dataset we collected for it is substantially larger, and more challenging than existing scene text dataset. This new real-world task provides a new perspective for studying scene text related problems. We also demonstrate the uniqueness of our task via a comparison between our problem and a typical Visual Question Answering problem.

Xiao Yang, Madian Khabsa, Miaosen Wang et al.

Community-based question answering (CQA) websites represent an important source of information. As a result, the problem of matching the most valuable answers to their corresponding questions has become an increasingly popular research topic. We frame this task as a binary (relevant/irrelevant) classification problem, and present an adversarial training framework to alleviate label imbalance issue. We employ a generative model to iteratively sample a subset of challenging negative samples to fool our classification model. Both models are alternatively optimized using REINFORCE algorithm. The proposed method is completely different from previous ones, where negative samples in training set are directly used or uniformly down-sampled. Further, we propose using Multi-scale Matching which explicitly inspects the correlation between words and ngrams of different levels of granularity. We evaluate the proposed method on SemEval 2016 and SemEval 2017 datasets and achieves state-of-the-art or similar performance.

Alexander G. Ororbia, Ankur Mali, Jian Wu et al.

For lossy image compression systems, we develop an algorithm, iterative refinement, to improve the decoder's reconstruction compared to standard decoding techniques. Specifically, we propose a recurrent neural network approach for nonlinear, iterative decoding. Our decoder, which works with any encoder, employs self-connected memory units that make use of causal and non-causal spatial context information to progressively reduce reconstruction error over a fixed number of steps. We experiment with variants of our estimator and find that iterative refinement consistently creates lower distortion images of higher perceptual quality compared to other approaches. Specifically, on the Kodak Lossless True Color Image Suite, we observe as much as a 0.871 decibel (dB) gain over JPEG, a 1.095 dB gain over JPEG 2000, and a 0.971 dB gain over a competitive neural model.

Alexander G. Ororbia, Ankur Mali, Daniel Kifer et al.

Using back-propagation and its variants to train deep networks is often problematic for new users. Issues such as exploding gradients, vanishing gradients, and high sensitivity to weight initialization strategies often make networks difficult to train, especially when users are experimenting with new architectures. Here, we present Local Representation Alignment (LRA), a training procedure that is much less sensitive to bad initializations, does not require modifications to the network architecture, and can be adapted to networks with highly nonlinear and discrete-valued activation functions. Furthermore, we show that one variation of LRA can start with a null initialization of network weights and still successfully train networks with a wide variety of nonlinearities, including tanh, ReLU-6, softplus, signum and others that may draw their inspiration from biology. A comprehensive set of experiments on MNIST and the much harder Fashion MNIST data sets show that LRA can be used to train networks robustly and effectively, succeeding even when back-propagation fails and outperforming other alternative learning algorithms, such as target propagation and feedback alignment.

Chen Liang, Jianbo Ye, Han Zhao et al.

Strict partial order is a mathematical structure commonly seen in relational data. One obstacle to extracting such type of relations at scale is the lack of large-scale labels for building effective data-driven solutions. We develop an active learning framework for mining such relations subject to a strict order. Our approach incorporates relational reasoning not only in finding new unlabeled pairs whose labels can be deduced from an existing label set, but also in devising new query strategies that consider the relational structure of labels. Our experiments on concept prerequisite relations show our proposed framework can substantially improve the classification performance with the same query budget compared to other baseline approaches.

Qinglong Wang, Kaixuan Zhang, Alexander G. Ororbia et al.

Understanding recurrent networks through rule extraction has a long history. This has taken on new interests due to the need for interpreting or verifying neural networks. One basic form for representing stateful rules is deterministic finite automata (DFA). Previous research shows that extracting DFAs from trained second-order recurrent networks is not only possible but also relatively stable. Recently, several new types of recurrent networks with more complicated architectures have been introduced. These handle challenging learning tasks usually involving sequential data. However, it remains an open problem whether DFAs can be adequately extracted from these models. Specifically, it is not clear how DFA extraction will be affected when applied to different recurrent networks trained on data sets with different levels of complexity. Here, we investigate DFA extraction on several widely adopted recurrent networks that are trained to learn a set of seven regular Tomita grammars. We first formally analyze the complexity of Tomita grammars and categorize these grammars according to that complexity. Then we empirically evaluate different recurrent networks for their performance of DFA extraction on all Tomita grammars. Our experiments show that for most recurrent networks, their extraction performance decreases as the complexity of the underlying grammar increases. On grammars of lower complexity, most recurrent networks obtain desirable extraction performance. As for grammars with the highest level of complexity, while several complicated models fail with only certain recurrent networks having satisfactory extraction performance.

Alexander G. Ororbia, Patrick Haffner, David Reitter et al.

We explore whether useful temporal neural generative models can be learned from sequential data without back-propagation through time. We investigate the viability of a more neurocognitively-grounded approach in the context of unsupervised generative modeling of sequences. Specifically, we build on the concept of predictive coding, which has gained influence in cognitive science, in a neural framework. To do so we develop a novel architecture, the Temporal Neural Coding Network, and its learning algorithm, Discrepancy Reduction. The underlying directed generative model is fully recurrent, meaning that it employs structural feedback connections and temporal feedback connections, yielding information propagation cycles that create local learning signals. This facilitates a unified bottom-up and top-down approach for information transfer inside the architecture. Our proposed algorithm shows promise on the bouncing balls generative modeling problem. Further experiments could be conducted to explore the strengths and weaknesses of our approach.

Qinglong Wang, Kaixuan Zhang, Alexander G. Ororbia et al.

Rule extraction from black-box models is critical in domains that require model validation before implementation, as can be the case in credit scoring and medical diagnosis. Though already a challenging problem in statistical learning in general, the difficulty is even greater when highly non-linear, recursive models, such as recurrent neural networks (RNNs), are fit to data. Here, we study the extraction of rules from second-order recurrent neural networks trained to recognize the Tomita grammars. We show that production rules can be stably extracted from trained RNNs and that in certain cases the rules outperform the trained RNNs.

Kunho Kim, Athar Sefid, C. Lee Giles

An author name disambiguation (AND) algorithm identifies a unique author entity record from all similar or same publication records in scholarly or similar databases. Typically, a clustering method is used that requires calculation of similarities between each possible record pair. However, the total number of pairs grows quadratically with the size of the author database making such clustering difficult for millions of records. One remedy for this is a blocking function that reduces the number of pairwise similarity calculations. Here, we introduce a new way of learning blocking schemes by using a conjunctive normal form (CNF) in contrast to the disjunctive normal form (DNF). We demonstrate on PubMed author records that CNF blocking reduces more pairs while preserving high pairs completeness compared to the previous methods that use a DNF with the computation time significantly reduced. Thus, these concepts in scholarly data can be better represented with CNFs. Moreover, we also show how to ensure that the method produces disjoint blocks so that the rest of the AND algorithm can be easily paralleled. Our CNF blocking tested on the entire PubMed database of 80 million author mentions efficiently removes 82.17% of all author record pairs in 10 minutes.

Xiao Yang, Ersin Yumer, Paul Asente et al.

We present an end-to-end, multimodal, fully convolutional network for extracting semantic structures from document images. We consider document semantic structure extraction as a pixel-wise segmentation task, and propose a unified model that classifies pixels based not only on their visual appearance, as in the traditional page segmentation task, but also on the content of underlying text. Moreover, we propose an efficient synthetic document generation process that we use to generate pretraining data for our network. Once the network is trained on a large set of synthetic documents, we fine-tune the network on unlabeled real documents using a semi-supervised approach. We systematically study the optimum network architecture and show that both our multimodal approach and the synthetic data pretraining significantly boost the performance.

Shikun Liu, C. Lee Giles, Alexander G. Ororbia

We propose the Variational Shape Learner (VSL), a generative model that learns the underlying structure of voxelized 3D shapes in an unsupervised fashion. Through the use of skip-connections, our model can successfully learn and infer a latent, hierarchical representation of objects. Furthermore, realistic 3D objects can be easily generated by sampling the VSL's latent probabilistic manifold. We show that our generative model can be trained end-to-end from 2D images to perform single image 3D model retrieval. Experiments show, both quantitatively and qualitatively, the improved generalization of our proposed model over a range of tasks, performing better or comparable to various state-of-the-art alternatives.

Qinglong Wang, Wenbo Guo, Kaixuan Zhang et al.

Deep neural networks (DNNs) have proven to be quite effective in a vast array of machine learning tasks, with recent examples in cyber security and autonomous vehicles. Despite the superior performance of DNNs in these applications, it has been recently shown that these models are susceptible to a particular type of attack that exploits a fundamental flaw in their design. This attack consists of generating particular synthetic examples referred to as adversarial samples. These samples are constructed by slightly manipulating real data-points in order to "fool" the original DNN model, forcing it to mis-classify previously correctly classified samples with high confidence. Addressing this flaw in the model is essential if DNNs are to be used in critical applications such as those in cyber security. Previous work has provided various learning algorithms to enhance the robustness of DNN models, and they all fall into the tactic of "security through obscurity". This means security can be guaranteed only if one can obscure the learning algorithms from adversaries. Once the learning technique is disclosed, DNNs protected by these defense mechanisms are still susceptible to adversarial samples. In this work, we investigate this issue shared across previous research work and propose a generic approach to escalate a DNN's resistance to adversarial samples. More specifically, our approach integrates a data transformation module with a DNN, making it robust even if we reveal the underlying learning algorithm. To demonstrate the generality of our proposed approach and its potential for handling cyber security applications, we evaluate our method and several other existing solutions on datasets publicly available. Our results indicate that our approach typically provides superior classification performance and resistance in comparison with state-of-art solutions.

Xiao Yang, Dafang He, Wenyi Huang et al.

Physical library collections are valuable and long standing resources for knowledge and learning. However, managing books in a large bookshelf and finding books on it often leads to tedious manual work, especially for large book collections where books might be missing or misplaced. Recently, deep neural models, such as Convolutional Neural Networks (CNN) and Recurrent Neural Networks (RNN) have achieved great success for scene text detection and recognition. Motivated by these recent successes, we aim to investigate their viability in facilitating book management, a task that introduces further challenges including large amounts of cluttered scene text, distortion, and varied lighting conditions. In this paper, we present a library inventory building and retrieval system based on scene text reading methods. We specifically design our scene text recognition model using rich supervision to accelerate training and achieve state-of-the-art performance on several benchmark datasets. Our proposed system has the potential to greatly reduce the amount of human labor required in managing book inventories as well as the space needed to store book information.

Qinglong Wang, Wenbo Guo, Alexander G. Ororbia et al.

Deep neural networks have proven to be quite effective in a wide variety of machine learning tasks, ranging from improved speech recognition systems to advancing the development of autonomous vehicles. However, despite their superior performance in many applications, these models have been recently shown to be susceptible to a particular type of attack possible through the generation of particular synthetic examples referred to as adversarial samples. These samples are constructed by manipulating real examples from the training data distribution in order to "fool" the original neural model, resulting in misclassification (with high confidence) of previously correctly classified samples. Addressing this weakness is of utmost importance if deep neural architectures are to be applied to critical applications, such as those in the domain of cybersecurity. In this paper, we present an analysis of this fundamental flaw lurking in all neural architectures to uncover limitations of previously proposed defense mechanisms. More importantly, we present a unifying framework for protecting deep neural models using a non-invertible data transformation--developing two adversary-resilient architectures utilizing both linear and nonlinear dimensionality reduction. Empirical results indicate that our framework provides better robustness compared to state-of-art solutions while having negligible degradation in accuracy.