Tobia Boschi

Cécile Rousseau, Samuel Jackson, Rodrigo H. Ordonez-Hurtado et al.

Development and operation of commercially viable fusion energy reactors such as tokamaks require accurate predictions of plasma dynamics from sparse, noisy, and incomplete sensors readings. The complexity of the underlying physics and the heterogeneity of experimental data pose formidable challenges for conventional numerical methods, while simultaneously highlight the promise of modern data-native AI approaches. A major obstacle in realizing this potential is, however, the lack of curated, openly available datasets and standardized benchmarks. Existing fusion datasets are scarce, fragmented across institutions, facility-specific, and inconsistently annotated, which limits reproducibility and prevents a fair and scalable comparison of AI approaches. In this paper, we introduce TokaMark, a structured benchmark to evaluate AI models on real experimental data collected from the Mega Ampere Spherical Tokamak (MAST). TokaMark provides a comprehensive suite of tools designed to (i) unify access to multi-modal heterogeneous fusion data, and (ii) harmonize formats, metadata, temporal alignment and evaluation protocols to enable consistent cross-model and cross-task comparisons. The benchmark includes a curated list of 14 tasks spanning a range of physical mechanisms, exploiting a variety of diagnostics and covering multiple operational use cases. A baseline model is provided to facilitate transparent comparison and validation within a unified framework. By establishing a unified benchmark for both the fusion and AI-for-science communities, TokaMark aims to accelerate progress in data-driven AI-based plasma modeling, contributing to the broader goal of achieving sustainable and stable fusion energy. The benchmark, documentation, and tooling will be fully open sourced upon acceptance to encourage community adoption and contribution.

Tobia Boschi, Andrea Loreti, Nicola C. Amorisco et al.

We present TokaMind, an open-source foundation model framework for fusion plasma modeling, based on a Multi-Modal Transformer (MMT) and trained on heterogeneous tokamak diagnostics from the publicly available MAST dataset. TokaMind supports multiple data modalities (time-series, 2D profiles, and videos) with different sampling rates, robust missing-signal handling, and efficient task adaptation via selectively loading and freezing four model components. To represent multi-modal signals, we use a training-free Discrete Cosine Transform embedding (DCT3D) and provide a clean interface for alternative embeddings (e.g., Variational Autoencoders - VAEs). We evaluate TokaMind on the recently introduced MAST benchmark TokaMark, comparing training and embedding strategies. Our results show that fine-tuned TokaMind outperforms the benchmark baseline on all but one task, and that, for several tasks, lightweight fine-tuning yields better performance than training the same architecture from scratch under a matched epoch budget. These findings highlight the benefits of multi-modal pretraining for tokamak plasma dynamics and provide a practical, extensible foundation for future fusion modeling tasks. Training code and model weights will be made publicly available.

Cécile Rousseau, Tobia Boschi, Giandomenico Cornacchia et al.

SDForger is a flexible and efficient framework for generating high-quality multivariate time series using LLMs. Leveraging a compact data representation, SDForger provides synthetic time series generation from a few samples and low-computation fine-tuning of any autoregressive LLM. Specifically, the framework transforms univariate and multivariate signals into tabular embeddings, which are then encoded into text and used to fine-tune the LLM. At inference, new textual embeddings are sampled and decoded into synthetic time series that retain the original data's statistical properties and temporal dynamics. Across a diverse range of datasets, SDForger outperforms existing generative models in many scenarios, both in similarity-based evaluations and downstream forecasting tasks. By enabling textual conditioning in the generation process, SDForger paves the way for multimodal modeling and the streamlined integration of time series with textual information. The model is open-sourced at https://github.com/IBM/fms-dgt/tree/main/fms_dgt/public/databuilders/time_series.

Tobia Boschi, Francesca Bonin, Rodrigo Ordonez-Hurtado et al.

This paper introduces a novel methodology for Feature Selection for Functional Classification, FSFC, that addresses the challenge of jointly performing feature selection and classification of functional data in scenarios with categorical responses and multivariate longitudinal features. FSFC tackles a newly defined optimization problem that integrates logistic loss and functional features to identify the most crucial variables for classification. To address the minimization procedure, we employ functional principal components and develop a new adaptive version of the Dual Augmented Lagrangian algorithm. The computational efficiency of FSFC enables handling high-dimensional scenarios where the number of features may considerably exceed the number of statistical units. Simulation experiments demonstrate that FSFC outperforms other machine learning and deep learning methods in computational time and classification accuracy. Furthermore, the FSFC feature selection capability can be leveraged to significantly reduce the problem's dimensionality and enhance the performances of other classification algorithms. The efficacy of FSFC is also demonstrated through a real data application, analyzing relationships between four chronic diseases and other health and demographic factors.

Tobia Boschi, Francesca Bonin, Rodrigo Ordonez-Hurtado et al.

This paper introduces a novel Functional Graph Convolutional Network (funGCN) framework that combines Functional Data Analysis and Graph Convolutional Networks to address the complexities of multi-task and multi-modal learning in digital health and longitudinal studies. With the growing importance of health solutions to improve health care and social support, ensure healthy lives, and promote well-being at all ages, funGCN offers a unified approach to handle multivariate longitudinal data for multiple entities and ensures interpretability even with small sample sizes. Key innovations include task-specific embedding components that manage different data types, the ability to perform classification, regression, and forecasting, and the creation of a knowledge graph for insightful data interpretation. The efficacy of funGCN is validated through simulation experiments and a real-data application.

Tobia Boschi, Matthew Reimherr, Francesca Chiaromonte

Feature selection is an important and active research area in statistics and machine learning. The Elastic Net is often used to perform selection when the features present non-negligible collinearity or practitioners wish to incorporate additional known structure. In this article, we propose a new Semi-smooth Newton Augmented Lagrangian Method to efficiently solve the Elastic Net in ultra-high dimensional settings. Our new algorithm exploits both the sparsity induced by the Elastic Net penalty and the sparsity due to the second order information of the augmented Lagrangian. This greatly reduces the computational cost of the problem. Using simulations on both synthetic and real datasets, we demonstrate that our approach outperforms its best competitors by at least an order of magnitude in terms of CPU time. We also apply our approach to a Genome Wide Association Study on childhood obesity.