Wei Le

Benjamin Steenhoek, Md Mahbubur Rahman, Richard Jiles et al.

Deep learning (DL) models of code have recently reported great progress for vulnerability detection. In some cases, DL-based models have outperformed static analysis tools. Although many great models have been proposed, we do not yet have a good understanding of these models. This limits the further advancement of model robustness, debugging, and deployment for the vulnerability detection. In this paper, we surveyed and reproduced 9 state-of-the-art (SOTA) deep learning models on 2 widely used vulnerability detection datasets: Devign and MSR. We investigated 6 research questions in three areas, namely model capabilities, training data, and model interpretation. We experimentally demonstrated the variability between different runs of a model and the low agreement among different models' outputs. We investigated models trained for specific types of vulnerabilities compared to a model that is trained on all the vulnerabilities at once. We explored the types of programs DL may consider "hard" to handle. We investigated the relations of training data sizes and training data composition with model performance. Finally, we studied model interpretations and analyzed important features that the models used to make predictions. We believe that our findings can help better understand model results, provide guidance on preparing training data, and improve the robustness of the models. All of our datasets, code, and results are available at https://doi.org/10.6084/m9.figshare.20791240.

Benjamin Steenhoek, Hongyang Gao, Wei Le

Deep learning-based vulnerability detection has shown great performance and, in some studies, outperformed static analysis tools. However, the highest-performing approaches use token-based transformer models, which are not the most efficient to capture code semantics required for vulnerability detection. Classical program analysis techniques such as dataflow analysis can detect many types of bugs based on their root causes. In this paper, we propose to combine such causal-based vulnerability detection algorithms with deep learning, aiming to achieve more efficient and effective vulnerability detection. Specifically, we designed DeepDFA, a dataflow analysis-inspired graph learning framework and an embedding technique that enables graph learning to simulate dataflow computation. We show that DeepDFA is both performant and efficient. DeepDFA outperformed all non-transformer baselines. It was trained in 9 minutes, 75x faster than the highest-performing baseline model. When using only 50+ vulnerable and several hundreds of total examples as training data, the model retained the same performance as 100% of the dataset. DeepDFA also generalized to real-world vulnerabilities in DbgBench; it detected 8.7 out of 17 vulnerabilities on average across folds and was able to distinguish between patched and buggy versions, while the highest-performing baseline models did not detect any vulnerabilities. By combining DeepDFA with a large language model, we surpassed the state-of-the-art vulnerability detection performance on the Big-Vul dataset with 96.46 F1 score, 97.82 precision, and 95.14 recall. Our replication package is located at https://doi.org/10.6084/m9.figshare.21225413 .

Md Mahbubur Rahman, Ira Ceka, Chengzhi Mao et al.

Deep learning vulnerability detection has shown promising results in recent years. However, an important challenge that still blocks it from being very useful in practice is that the model is not robust under perturbation and it cannot generalize well over the out-of-distribution (OOD) data, e.g., applying a trained model to unseen projects in real world. We hypothesize that this is because the model learned non-robust features, e.g., variable names, that have spurious correlations with labels. When the perturbed and OOD datasets no longer have the same spurious features, the model prediction fails. To address the challenge, in this paper, we introduced causality into deep learning vulnerability detection. Our approach CausalVul consists of two phases. First, we designed novel perturbations to discover spurious features that the model may use to make predictions. Second, we applied the causal learning algorithms, specifically, do-calculus, on top of existing deep learning models to systematically remove the use of spurious features and thus promote causal based prediction. Our results show that CausalVul consistently improved the model accuracy, robustness and OOD performance for all the state-of-the-art models and datasets we experimented. To the best of our knowledge, this is the first work that introduces do calculus based causal learning to software engineering models and shows it's indeed useful for improving the model accuracy, robustness and generalization. Our replication package is located at https://figshare.com/s/0ffda320dcb96c249ef2.

Benjamin Steenhoek, Kalpathy Sivaraman, Renata Saldivar Gonzalez et al.

This paper presents the first empirical study of a vulnerability detection and fix tool with professional software developers on real projects that they own. We implemented DeepVulGuard, an IDE-integrated tool based on state-of-the-art detection and fix models, and show that it has promising performance on benchmarks of historic vulnerability data. DeepVulGuard scans code for vulnerabilities (including identifying the vulnerability type and vulnerable region of code), suggests fixes, provides natural-language explanations for alerts and fixes, leveraging chat interfaces. We recruited 17 professional software developers at Microsoft, observed their usage of the tool on their code, and conducted interviews to assess the tool's usefulness, speed, trust, relevance, and workflow integration. We also gathered detailed qualitative feedback on users' perceptions and their desired features. Study participants scanned a total of 24 projects, 6.9k files, and over 1.7 million lines of source code, and generated 170 alerts and 50 fix suggestions. We find that although state-of-the-art AI-powered detection and fix tools show promise, they are not yet practical for real-world use due to a high rate of false positives and non-applicable fixes. User feedback reveals several actionable pain points, ranging from incomplete context to lack of customization for the user's codebase. Additionally, we explore how AI features, including confidence scores, explanations, and chat interaction, can apply to vulnerability detection and fixing. Based on these insights, we offer practical recommendations for evaluating and deploying AI detection and fix models. Our code and data are available at https://doi.org/10.6084/m9.figshare.26367139.

Samrajya Thapa, Koushik Howlader, Subhankar Bhattacharjee et al.

In this paper, we introduce a novel Multi-Modal Contrastive Pre-training Framework that synergistically combines X-rays, electrocardiograms (ECGs), and radiology/cardiology reports. Our approach leverages transformers to encode these diverse modalities into a unified representation space, aiming to enhance diagnostic accuracy and facilitate comprehensive patient assessments. We utilize LoRA-Peft to significantly reduce trainable parameters in the LLM and incorporate recent linear attention dropping strategy in the Vision Transformer(ViT) for smoother attention. Furthermore, we provide novel multimodal attention explanations and retrieval for our model. To the best of our knowledge, we are the first to propose an integrated model that combines X-ray, ECG, and Radiology/Cardiology Report with this approach. By utilizing contrastive loss, MoRE effectively aligns modality-specific features into a coherent embedding, which supports various downstream tasks such as zero-shot classification and multimodal retrieval. Employing our proposed methodology, we achieve state-of-the-art (SOTA) on the Mimic-IV, CheXpert, Edema Severity, and PtbXl downstream datasets, surpassing existing multimodal approaches. Our proposed framework shows significant improvements in capturing intricate inter-modal relationships and its robustness in medical diagnosis that establishes a framework for future research in multimodal learning in the healthcare sector.

Ashwin Kallingal Joshy, Wei Le

Software development is inherently incremental. Nowadays, many software companies adopt an agile process and a shorter release cycle, where software needs to be delivered faster with quality assurances. On the other hand, the majority of existing program analysis tools still target single versions of programs and are slow and inflexible to handle changes. In the popular version control systems such as git, the program changes are still presented using source code diffs. It is hard to understand what program conditions are changed and which source code lines cause them. In this paper, we propose to compute "invariant diffs" to specify changes. Similar to source diffs that report common code and code churns, we define version invariants to represent program conditions that are common across versions, and invariant churns to show the changes of program conditions between versions. We designed a static demand-driven, path-sensitive analysis to compute and compare invariants for multiple versions of programs using multiversion control flow graphs. We report invariant diffs at the matched program points where comparing invariants are meaningful. Importantly, our analysis correlates source diffs with invariant diffs to explain what source code changes lead to the property changes. We implemented our algorithms in a tool called $H_2$ and performed experiments on 104 versions of programs. Our results show that we are able to compute invariant diffs correctly within reasonable amount of time. The version invariants can capture the common properties of program versions even constructed by different persons, and the invariant churns can specify the semantics of changes such as how a patch changed a buggy condition to a correct condition.