Justus Henneberg

Rosina Kharal, Trevor Brown, Justus Henneberg et al.

GPU-based concurrent data structures (CDSs) achieve high throughput for read-only queries, but efficient support for dynamic updates on fully GPU-resident data remains challenging. Ordered CDSs (e.g., B-trees and LSM-trees) maintain an index layer that directs operations to a data layer (buckets or leaves), while hash tables avoid the cost of maintaining order but do not support range or successor queries. On GPUs, maintaining and traversing an index layer under frequent updates introduces contention and warp divergence. To tackle these problems, we flip the indexing paradigm on its head with FliX, a comparison-based, flipped indexing strategy for dynamic, fully GPU-resident CDSs. Traditional GPU CDSs typically take a batch of operations and assign each operation to a GPU thread or warp. FliX, however, assigns compute (e.g., a warp) to each bucket in the data layer, and each bucket then locates operations it is responsible for in the batch. FliX can replace many index layer traversals with a single binary search on the batch, reducing redundant work and warp divergence. Further, FliX simplifies updates as no index layer must be maintained. In our experiments, FliX achieves 6.5x reduced query latency compared to a leading GPU B-tree and 1.5x compared to a leading GPU LSM-tree, while delivering 4x higher throughput per memory footprint than ordered competitors. Despite maintaining order, FliX also surpasses state-of-the-art unordered GPU hash tables in query and deletion performance, and is highly competitive in insertion performance. In update-heavy workloads, it outperforms the closest fully dynamic ordered baseline by over 8x in insertion throughput while supporting dynamic memory reclamation. These results suggest that eliminating the index layer and adopting a compute-to-bucket mapping can enable practical, fully dynamic GPU indexing without sacrificing query performance.

Lara Kreis, Justus Henneberg, Valentin Henkys et al.

Range minimum queries are frequently used in string processing and database applications including biological sequence analysis, document retrieval, and web search. Hence, various data structures have been proposed for improving their efficiency on both CPUs and GPUs.Recent work has also shown that hardware-accelerated ray tracing on modern NVIDIA RTX graphic cards can be exploited to answer range minimum queries by expressing queries as rays, which are fired into a scene of triangles representing minima of ranges at different granularities. While these approaches are promising, they suffer from at least one of three issues: severe memory overhead, high index construction time, and low query throughput. This renders these methods practically unusable on larger arrays: For example, the state-of-art GPU-based approaches LCA and RTXRMQ exceed the memory capacity of an NVIDIA RTX 4090 GPU for input arrays of size >= 2^29. To tackle these problems, in this work, we present a new approach called GPU-RMQ which is based on a hierarchical approach. GPU-RMQ first constructs a hierarchy of range minimum summaries on top of the original array in a highly parallel fashion. For query answering, only the relevant portions of the hierarchy are then processed in an optimized massively-parallel scan operation. Additionally, GPU-RMQ is hybrid in design enabling the use of both ray tracing cores and CUDA cores across different levels of the hierarchy to handle queries. Our experimental evaluation shows that GPU-RMQ outperforms the state-of-the-art approaches in terms of query throughput especially for larger arrays while offering a significantly lower memory footprint and up to two orders-of-magnitude faster index construction. In particular, it achieves up to ~8x higher throughput than LCA, ~17x higher throughput than RTXRMQ, and up to ~4800x higher throughput compared to an optimized CPU-based approach.