Ji‐Woong Choi

h-index26
2papers
2,461citations

2 Papers

1.4LGJan 27
AROMMA: Unifying Olfactory Embeddings for Single Molecules and Mixtures

Dayoung Kang, JongWon Kim, Jiho Park et al.

Public olfaction datasets are small and fragmented across single molecules and mixtures, limiting learning of generalizable odor representations. Recent works either learn single-molecule embeddings or address mixtures via similarity or pairwise label prediction, leaving representations separate and unaligned. In this work, we propose AROMMA, a framework that learns a unified embedding space for single molecules and two-molecule mixtures. Each molecule is encoded by a chemical foundation model and the mixtures are composed by an attention-based aggregator, ensuring both permutation invariance and asymmetric molecular interactions. We further align odor descriptor sets using knowledge distillation and class-aware pseudo-labeling to enrich missing mixture annotations. AROMMA achieves state-of-the-art performance in both single-molecule and molecule-pair datasets, with up to 19.1% AUROC improvement, demonstrating a robust generalization in two domains.

2.3CYMay 25, 2025
Language Models Surface the Unwritten Code of Science and Society

Honglin Bao, Siyang Wu, Jiwoong Choi et al.

This paper calls on the research community not only to investigate how human biases are inherited by large language models (LLMs) but also to explore how these biases in LLMs can be leveraged to make society's "unwritten code" - such as implicit stereotypes and heuristics - visible and accessible for critique. We introduce a conceptual framework through a case study in science: uncovering hidden rules in peer review - the factors that reviewers care about but rarely state explicitly due to normative scientific expectations. The idea of the framework is to push LLMs to speak out their heuristics through generating self-consistent hypotheses - why one paper appeared stronger in reviewer scoring - among paired papers submitted to 45 academic conferences, while iteratively searching deeper hypotheses from remaining pairs where existing hypotheses cannot explain. We observed that LLMs' normative priors about the internal characteristics of good science extracted from their self-talk, e.g., theoretical rigor, were systematically updated toward posteriors that emphasize storytelling about external connections, such as how the work is positioned and connected within and across literatures. Human reviewers tend to explicitly reward aspects that moderately align with LLMs' normative priors (correlation = 0.49) but avoid articulating contextualization and storytelling posteriors in their review comments (correlation = -0.14), despite giving implicit reward to them with positive scores. These patterns are robust across different models and out-of-sample judgments. We discuss the broad applicability of our proposed framework, leveraging LLMs as diagnostic tools to amplify and surface the tacit codes underlying human society, enabling public discussion of revealed values and more precisely targeted responsible AI.