Sheraz Ahmed

LG
h-index32
56papers
1,106citations
Novelty45%
AI Score38

56 Papers

11.1LGNov 8, 2022
Privacy Meets Explainability: A Comprehensive Impact Benchmark

Saifullah Saifullah, Dominique Mercier, Adriano Lucieri et al.

Since the mid-10s, the era of Deep Learning (DL) has continued to this day, bringing forth new superlatives and innovations each year. Nevertheless, the speed with which these innovations translate into real applications lags behind this fast pace. Safety-critical applications, in particular, underlie strict regulatory and ethical requirements which need to be taken care of and are still active areas of debate. eXplainable AI (XAI) and privacy-preserving machine learning (PPML) are both crucial research fields, aiming at mitigating some of the drawbacks of prevailing data-hungry black-box models in DL. Despite brisk research activity in the respective fields, no attention has yet been paid to their interaction. This work is the first to investigate the impact of private learning techniques on generated explanations for DL-based models. In an extensive experimental analysis covering various image and time series datasets from multiple domains, as well as varying privacy techniques, XAI methods, and model architectures, the effects of private training on generated explanations are studied. The findings suggest non-negligible changes in explanations through the introduction of privacy. Apart from reporting individual effects of PPML on XAI, the paper gives clear recommendations for the choice of techniques in real applications. By unveiling the interdependencies of these pivotal technologies, this work is a first step towards overcoming the remaining hurdles for practically applicable AI in safety-critical domains.

3.8LGJan 31, 2023
A Bayesian Generative Adversarial Network (GAN) to Generate Synthetic Time-Series Data, Application in Combined Sewer Flow Prediction

Amin E. Bakhshipour, Alireza Koochali, Ulrich Dittmer et al.

Despite various breakthroughs in machine learning and data analysis techniques for improving smart operation and management of urban water infrastructures, some key limitations obstruct this progress. Among these shortcomings, the absence of freely available data due to data privacy or high costs of data gathering and the nonexistence of adequate rare or extreme events in the available data plays a crucial role. Here, Generative Adversarial Networks (GANs) can help overcome these challenges. In machine learning, generative models are a class of methods capable of learning data distribution to generate artificial data. In this study, we developed a GAN model to generate synthetic time series to balance our limited recorded time series data and improve the accuracy of a data-driven model for combined sewer flow prediction. We considered the sewer system of a small town in Germany as the test case. Precipitation and inflow to the storage tanks are used for the Data-Driven model development. The aim is to predict the flow using precipitation data and examine the impact of data augmentation using synthetic data in model performance. Results show that GAN can successfully generate synthetic time series from real data distribution, which helps more accurate peak flow prediction. However, the model without data augmentation works better for dry weather prediction. Therefore, an ensemble model is suggested to combine the advantages of both models.

3.3LGOct 14, 2022
Quantifying Quality of Class-Conditional Generative Models in Time-Series Domain

Alireza Koochali, Maria Walch, Sankrutyayan Thota et al.

Generative models are designed to address the data scarcity problem. Even with the exploding amount of data, due to computational advancements, some applications (e.g., health care, weather forecast, fault detection) still suffer from data insufficiency, especially in the time-series domain. Thus generative models are essential and powerful tools, but they still lack a consensual approach for quality assessment. Such deficiency hinders the confident application of modern implicit generative models on time-series data. Inspired by assessment methods on the image domain, we introduce the InceptionTime Score (ITS) and the Frechet InceptionTime Distance (FITD) to gauge the qualitative performance of class conditional generative models on the time-series domain. We conduct extensive experiments on 80 different datasets to study the discriminative capabilities of proposed metrics alongside two existing evaluation metrics: Train on Synthetic Test on Real (TSTR) and Train on Real Test on Synthetic (TRTS). Extensive evaluation reveals that the proposed assessment method, i.e., ITS and FITD in combination with TSTR, can accurately assess class-conditional generative model performance.

5.7CVJun 13, 2022Code
Revisiting the Shape-Bias of Deep Learning for Dermoscopic Skin Lesion Classification

Adriano Lucieri, Fabian Schmeisser, Christoph Peter Balada et al.

It is generally believed that the human visual system is biased towards the recognition of shapes rather than textures. This assumption has led to a growing body of work aiming to align deep models' decision-making processes with the fundamental properties of human vision. The reliance on shape features is primarily expected to improve the robustness of these models under covariate shift. In this paper, we revisit the significance of shape-biases for the classification of skin lesion images. Our analysis shows that different skin lesion datasets exhibit varying biases towards individual image features. Interestingly, despite deep feature extractors being inclined towards learning entangled features for skin lesion classification, individual features can still be decoded from this entangled representation. This indicates that these features are still represented in the learnt embedding spaces of the models, but not used for classification. In addition, the spectral analysis of different datasets shows that in contrast to common visual recognition, dermoscopic skin lesion classification, by nature, is reliant on complex feature combinations beyond shape-bias. As a natural consequence, shifting away from the prevalent desire of shape-biasing models can even improve skin lesion classifiers in some cases.

0.8CLApr 13, 2022
A Novel Approach to Train Diverse Types of Language Models for Health Mention Classification of Tweets

Pervaiz Iqbal Khan, Imran Razzak, Andreas Dengel et al.

Health mention classification deals with the disease detection in a given text containing disease words. However, non-health and figurative use of disease words adds challenges to the task. Recently, adversarial training acting as a means of regularization has gained popularity in many NLP tasks. In this paper, we propose a novel approach to train language models for health mention classification of tweets that involves adversarial training. We generate adversarial examples by adding perturbation to the representations of transformer models for tweet examples at various levels using Gaussian noise. Further, we employ contrastive loss as an additional objective function. We evaluate the proposed method on the PHM2017 dataset extended version. Results show that our proposed approach improves the performance of classifier significantly over the baseline methods. Moreover, our analysis shows that adding noise at earlier layers improves models' performance whereas adding noise at intermediate layers deteriorates models' performance. Finally, adding noise towards the final layers performs better than the middle layers noise addition.

4.5AIMar 3, 2022
Improving Health Mentioning Classification of Tweets using Contrastive Adversarial Training

Pervaiz Iqbal Khan, Shoaib Ahmed Siddiqui, Imran Razzak et al.

Health mentioning classification (HMC) classifies an input text as health mention or not. Figurative and non-health mention of disease words makes the classification task challenging. Learning the context of the input text is the key to this problem. The idea is to learn word representation by its surrounding words and utilize emojis in the text to help improve the classification results. In this paper, we improve the word representation of the input text using adversarial training that acts as a regularizer during fine-tuning of the model. We generate adversarial examples by perturbing the embeddings of the model and then train the model on a pair of clean and adversarial examples. Additionally, we utilize contrastive loss that pushes a pair of clean and perturbed examples close to each other and other examples away in the representation space. We train and evaluate the method on an extended version of the publicly available PHM2017 dataset. Experiments show an improvement of 1.0% over BERT-Large baseline and 0.6% over RoBERTa-Large baseline, whereas 5.8% over the state-of-the-art in terms of F1 score. Furthermore, we provide a brief analysis of the results by utilizing the power of explainable AI.

2.0LGMar 28, 2023
From Private to Public: Benchmarking GANs in the Context of Private Time Series Classification

Dominique Mercier, Andreas Dengel, Sheraz Ahmed

Deep learning has proven to be successful in various domains and for different tasks. However, when it comes to private data several restrictions are making it difficult to use deep learning approaches in these application fields. Recent approaches try to generate data privately instead of applying a privacy-preserving mechanism directly, on top of the classifier. The solution is to create public data from private data in a manner that preserves the privacy of the data. In this work, two very prominent GAN-based architectures were evaluated in the context of private time series classification. In contrast to previous work, mostly limited to the image domain, the scope of this benchmark was the time series domain. The experiments show that especially GSWGAN performs well across a variety of public datasets outperforming the competitor DPWGAN. An analysis of the generated datasets further validates the superiority of GSWGAN in the context of time series generation.

6.5CVJul 4, 2024
DocXplain: A Novel Model-Agnostic Explainability Method for Document Image Classification

Saifullah Saifullah, Stefan Agne, Andreas Dengel et al.

Deep learning (DL) has revolutionized the field of document image analysis, showcasing superhuman performance across a diverse set of tasks. However, the inherent black-box nature of deep learning models still presents a significant challenge to their safe and robust deployment in industry. Regrettably, while a plethora of research has been dedicated in recent years to the development of DL-powered document analysis systems, research addressing their transparency aspects has been relatively scarce. In this paper, we aim to bridge this research gap by introducing DocXplain, a novel model-agnostic explainability method specifically designed for generating high interpretability feature attribution maps for the task of document image classification. In particular, our approach involves independently segmenting the foreground and background features of the documents into different document elements and then ablating these elements to assign feature importance. We extensively evaluate our proposed approach in the context of document image classification, utilizing 4 different evaluation metrics, 2 widely recognized document benchmark datasets, and 10 state-of-the-art document image classification models. By conducting a thorough quantitative and qualitative analysis against 9 existing state-of-the-art attribution methods, we demonstrate the superiority of our approach in terms of both faithfulness and interpretability. To the best of the authors' knowledge, this work presents the first model-agnostic attribution-based explainability method specifically tailored for document images. We anticipate that our work will significantly contribute to advancing research on transparency, fairness, and robustness of document image classification models.

7.3IVOct 31, 2023
Medi-CAT: Contrastive Adversarial Training for Medical Image Classification

Pervaiz Iqbal Khan, Andreas Dengel, Sheraz Ahmed

There are not many large medical image datasets available. For these datasets, too small deep learning models can't learn useful features, so they don't work well due to underfitting, and too big models tend to overfit the limited data. As a result, there is a compromise between the two issues. This paper proposes a training strategy Medi-CAT to overcome the underfitting and overfitting phenomena in medical imaging datasets. Specifically, the proposed training methodology employs large pre-trained vision transformers to overcome underfitting and adversarial and contrastive learning techniques to prevent overfitting. The proposed method is trained and evaluated on four medical image classification datasets from the MedMNIST collection. Our experimental results indicate that the proposed approach improves the accuracy up to 2% on three benchmark datasets compared to well-known approaches, whereas it increases the performance up to 4.1% over the baseline methods.

3.7CVAug 19, 2024
Latent Diffusion for Guided Document Table Generation

Syed Jawwad Haider Hamdani, Saifullah Saifullah, Stefan Agne et al.

Obtaining annotated table structure data for complex tables is a challenging task due to the inherent diversity and complexity of real-world document layouts. The scarcity of publicly available datasets with comprehensive annotations for intricate table structures hinders the development and evaluation of models designed for such scenarios. This research paper introduces a novel approach for generating annotated images for table structure by leveraging conditioned mask images of rows and columns through the application of latent diffusion models. The proposed method aims to enhance the quality of synthetic data used for training object detection models. Specifically, the study employs a conditioning mechanism to guide the generation of complex document table images, ensuring a realistic representation of table layouts. To evaluate the effectiveness of the generated data, we employ the popular YOLOv5 object detection model for training. The generated table images serve as valuable training samples, enriching the dataset with diverse table structures. The model is subsequently tested on the challenging pubtables-1m testset, a benchmark for table structure recognition in complex document layouts. Experimental results demonstrate that the introduced approach significantly improves the quality of synthetic data for training, leading to YOLOv5 models with enhanced performance. The mean Average Precision (mAP) values obtained on the pubtables-1m testset showcase results closely aligned with state-of-the-art methods. Furthermore, low FID results obtained on the synthetic data further validate the efficacy of the proposed methodology in generating annotated images for table structure.

1.9CLJul 22, 2024
StylusAI: Stylistic Adaptation for Robust German Handwritten Text Generation

Nauman Riaz, Saifullah Saifullah, Stefan Agne et al.

In this study, we introduce StylusAI, a novel architecture leveraging diffusion models in the domain of handwriting style generation. StylusAI is specifically designed to adapt and integrate the stylistic nuances of one language's handwriting into another, particularly focusing on blending English handwriting styles into the context of the German writing system. This approach enables the generation of German text in English handwriting styles and German handwriting styles into English, enriching machine-generated handwriting diversity while ensuring that the generated text remains legible across both languages. To support the development and evaluation of StylusAI, we present the \lq{Deutscher Handschriften-Datensatz}\rq~(DHSD), a comprehensive dataset encompassing 37 distinct handwriting styles within the German language. This dataset provides a fundamental resource for training and benchmarking in the realm of handwritten text generation. Our results demonstrate that StylusAI not only introduces a new method for style adaptation in handwritten text generation but also surpasses existing models in generating handwriting samples that improve both text quality and stylistic fidelity, evidenced by its performance on the IAM database and our newly proposed DHSD. Thus, StylusAI represents a significant advancement in the field of handwriting style generation, offering promising avenues for future research and applications in cross-linguistic style adaptation for languages with similar scripts.

3.9AIOct 29, 2023
A Unique Training Strategy to Enhance Language Models Capabilities for Health Mention Detection from Social Media Content

Pervaiz Iqbal Khan, Muhammad Nabeel Asim, Andreas Dengel et al.

An ever-increasing amount of social media content requires advanced AI-based computer programs capable of extracting useful information. Specifically, the extraction of health-related content from social media is useful for the development of diverse types of applications including disease spread, mortality rate prediction, and finding the impact of diverse types of drugs on diverse types of diseases. Language models are competent in extracting the syntactic and semantics of text. However, they face a hard time extracting similar patterns from social media texts. The primary reason for this shortfall lies in the non-standardized writing style commonly employed by social media users. Following the need for an optimal language model competent in extracting useful patterns from social media text, the key goal of this paper is to train language models in such a way that they learn to derive generalized patterns. The key goal is achieved through the incorporation of random weighted perturbation and contrastive learning strategies. On top of a unique training strategy, a meta predictor is proposed that reaps the benefits of 5 different language models for discriminating posts of social media text into non-health and health-related classes. Comprehensive experimentation across 3 public benchmark datasets reveals that the proposed training strategy improves the performance of the language models up to 3.87%, in terms of F1-score, as compared to their performance with traditional training. Furthermore, the proposed meta predictor outperforms existing health mention classification predictors across all 3 benchmark datasets.

0.5CLOct 5, 2023
PrIeD-KIE: Towards Privacy Preserved Document Key Information Extraction

Saifullah Saifullah, Stefan Agne, Andreas Dengel et al.

In this paper, we introduce strategies for developing private Key Information Extraction (KIE) systems by leveraging large pretrained document foundation models in conjunction with differential privacy (DP), federated learning (FL), and Differentially Private Federated Learning (DP-FL). Through extensive experimentation on six benchmark datasets (FUNSD, CORD, SROIE, WildReceipts, XFUND, and DOCILE), we demonstrate that large document foundation models can be effectively fine-tuned for the KIE task under private settings to achieve adequate performance while maintaining strong privacy guarantees. Moreover, by thoroughly analyzing the impact of various training and model parameters on model performance, we propose simple yet effective guidelines for achieving an optimal privacy-utility trade-off for the KIE task under global DP. Finally, we introduce FeAm-DP, a novel DP-FL algorithm that enables efficiently upscaling global DP from a standalone context to a multi-client federated environment. We conduct a comprehensive evaluation of the algorithm across various client and privacy settings, and demonstrate its capability to achieve comparable performance and privacy guarantees to standalone DP, even when accommodating an increasing number of participating clients. Overall, our study offers valuable insights into the development of private KIE systems, and highlights the potential of document foundation models for privacy-preserved Document AI applications. To the best of authors' knowledge, this is the first work that explores privacy preserved document KIE using document foundation models.

3.0CVMay 4, 2016Code
A Generic Method for Automatic Ground Truth Generation of Camera-captured Documents

Sheraz Ahmed, Muhammad Imran Malik, Muhammad Zeshan Afzal et al.

The contribution of this paper is fourfold. The first contribution is a novel, generic method for automatic ground truth generation of camera-captured document images (books, magazines, articles, invoices, etc.). It enables us to build large-scale (i.e., millions of images) labeled camera-captured/scanned documents datasets, without any human intervention. The method is generic, language independent and can be used for generation of labeled documents datasets (both scanned and cameracaptured) in any cursive and non-cursive language, e.g., English, Russian, Arabic, Urdu, etc. To assess the effectiveness of the presented method, two different datasets in English and Russian are generated using the presented method. Evaluation of samples from the two datasets shows that 99:98% of the images were correctly labeled. The second contribution is a large dataset (called C3Wi) of camera-captured characters and words images, comprising 1 million word images (10 million character images), captured in a real camera-based acquisition. This dataset can be used for training as well as testing of character recognition systems on camera-captured documents. The third contribution is a novel method for the recognition of cameracaptured document images. The proposed method is based on Long Short-Term Memory and outperforms the state-of-the-art methods for camera based OCRs. As a fourth contribution, various benchmark tests are performed to uncover the behavior of commercial (ABBYY), open source (Tesseract), and the presented camera-based OCR using the presented C3Wi dataset. Evaluation results reveal that the existing OCRs, which already get very high accuracies on scanned documents, have limited performance on camera-captured document images; where ABBYY has an accuracy of 75%, Tesseract an accuracy of 50.22%, while the presented character recognition system has an accuracy of 95.10%.

2.6LGMay 7, 2024
VAEneu: A New Avenue for VAE Application on Probabilistic Forecasting

Alireza Koochali, Ensiye Tahaei, Andreas Dengel et al.

This paper presents VAEneu, an innovative autoregressive method for multistep ahead univariate probabilistic time series forecasting. We employ the conditional VAE framework and optimize the lower bound of the predictive distribution likelihood function by adopting the Continuous Ranked Probability Score (CRPS), a strictly proper scoring rule, as the loss function. This novel pipeline results in forecasting sharp and well-calibrated predictive distribution. Through a comprehensive empirical study, VAEneu is rigorously benchmarked against 12 baseline models across 12 datasets. The results unequivocally demonstrate VAEneu's remarkable forecasting performance. VAEneu provides a valuable tool for quantifying future uncertainties, and our extensive empirical study lays the foundation for future comparative studies for univariate multistep ahead probabilistic forecasting.

13.4LGApr 16, 2024
Generating Counterfactual Trajectories with Latent Diffusion Models for Concept Discovery

Payal Varshney, Adriano Lucieri, Christoph Balada et al.

Trustworthiness is a major prerequisite for the safe application of opaque deep learning models in high-stakes domains like medicine. Understanding the decision-making process not only contributes to fostering trust but might also reveal previously unknown decision criteria of complex models that could advance the state of medical research. The discovery of decision-relevant concepts from black box models is a particularly challenging task. This study proposes Concept Discovery through Latent Diffusion-based Counterfactual Trajectories (CDCT), a novel three-step framework for concept discovery leveraging the superior image synthesis capabilities of diffusion models. In the first step, CDCT uses a Latent Diffusion Model (LDM) to generate a counterfactual trajectory dataset. This dataset is used to derive a disentangled representation of classification-relevant concepts using a Variational Autoencoder (VAE). Finally, a search algorithm is applied to identify relevant concepts in the disentangled latent space. The application of CDCT to a classifier trained on the largest public skin lesion dataset revealed not only the presence of several biases but also meaningful biomarkers. Moreover, the counterfactuals generated within CDCT show better FID scores than those produced by a previously established state-of-the-art method, while being 12 times more resource-efficient. Unsupervised concept discovery holds great potential for the application of trustworthy AI and the further development of human knowledge in various domains. CDCT represents a further step in this direction.

1.9CLApr 30, 2024
Improving Disease Detection from Social Media Text via Self-Augmentation and Contrastive Learning

Pervaiz Iqbal Khan, Andreas Dengel, Sheraz Ahmed

Detecting diseases from social media has diverse applications, such as public health monitoring and disease spread detection. While language models (LMs) have shown promising performance in this domain, there remains ongoing research aimed at refining their discriminating representations. In this paper, we propose a novel method that integrates Contrastive Learning (CL) with language modeling to address this challenge. Our approach introduces a self-augmentation method, wherein hidden representations of the model are augmented with their own representations. This method comprises two branches: the first branch, a traditional LM, learns features specific to the given data, while the second branch incorporates augmented representations from the first branch to encourage generalization. CL further refines these representations by pulling pairs of original and augmented versions closer while pushing other samples away. We evaluate our method on three NLP datasets encompassing binary, multi-label, and multi-class classification tasks involving social media posts related to various diseases. Our approach demonstrates notable improvements over traditional fine-tuning methods, achieving up to a 2.48% increase in F1-score compared to baseline approaches and a 2.1% enhancement over state-of-the-art methods.

8.4CVSep 10, 2025
LD-ViCE: Latent Diffusion Model for Video Counterfactual Explanations

Payal Varshney, Adriano Lucieri, Christoph Balada et al.

Video-based AI systems are increasingly adopted in safety-critical domains such as autonomous driving and healthcare. However, interpreting their decisions remains challenging due to the inherent spatiotemporal complexity of video data and the opacity of deep learning models. Existing explanation techniques often suffer from limited temporal coherence, insufficient robustness, and a lack of actionable causal insights. Current counterfactual explanation methods typically do not incorporate guidance from the target model, reducing semantic fidelity and practical utility. We introduce Latent Diffusion for Video Counterfactual Explanations (LD-ViCE), a novel framework designed to explain the behavior of video-based AI models. Compared to previous approaches, LD-ViCE reduces the computational costs of generating explanations by operating in latent space using a state-of-the-art diffusion model, while producing realistic and interpretable counterfactuals through an additional refinement step. Our experiments demonstrate the effectiveness of LD-ViCE across three diverse video datasets, including EchoNet-Dynamic (cardiac ultrasound), FERV39k (facial expression), and Something-Something V2 (action recognition). LD-ViCE outperforms a recent state-of-the-art method, achieving an increase in R2 score of up to 68% while reducing inference time by half. Qualitative analysis confirms that LD-ViCE generates semantically meaningful and temporally coherent explanations, offering valuable insights into the target model behavior. LD-ViCE represents a valuable step toward the trustworthy deployment of AI in safety-critical domains.

3.6CVMay 11, 2025
Discovering Concept Directions from Diffusion-based Counterfactuals via Latent Clustering

Payal Varshney, Adriano Lucieri, Christoph Balada et al.

Concept-based explanations have emerged as an effective approach within Explainable Artificial Intelligence, enabling interpretable insights by aligning model decisions with human-understandable concepts. However, existing methods rely on computationally intensive procedures and struggle to efficiently capture complex, semantic concepts. Recently, the Concept Discovery through Latent Diffusion-based Counterfactual Trajectories (CDCT) framework, introduced by Varshney et al. (2025), attempts to identify concepts via dimension-wise traversal of the latent space of a Variational Autoencoder trained on counterfactual trajectories. Extending the CDCT framework, this work introduces Concept Directions via Latent Clustering (CDLC), which extracts global, class-specific concept directions by clustering latent difference vectors derived from factual and diffusion-generated counterfactual image pairs. CDLC substantially reduces computational complexity by eliminating the exhaustive latent dimension traversal required in CDCT and enables the extraction of multidimensional semantic concepts encoded across the latent dimensions. This approach is validated on a real-world skin lesion dataset, demonstrating that the extracted concept directions align with clinically recognized dermoscopic features and, in some cases, reveal dataset-specific biases or unknown biomarkers. These results highlight that CDLC is interpretable, scalable, and applicable across high-stakes domains and diverse data modalities.

3.6CVApr 9, 2025
Deep Learning for Cardiovascular Risk Assessment: Proxy Features from Carotid Sonography as Predictors of Arterial Damage

Christoph Balada, Aida Romano-Martinez, Vincent ten Cate et al.

In this study, hypertension is utilized as an indicator of individual vascular damage. This damage can be identified through machine learning techniques, providing an early risk marker for potential major cardiovascular events and offering valuable insights into the overall arterial condition of individual patients. To this end, the VideoMAE deep learning model, originally developed for video classification, was adapted by finetuning for application in the domain of ultrasound imaging. The model was trained and tested using a dataset comprising over 31,000 carotid sonography videos sourced from the Gutenberg Health Study (15,010 participants), one of the largest prospective population health studies. This adaptation facilitates the classification of individuals as hypertensive or non-hypertensive (75.7% validation accuracy), functioning as a proxy for detecting visual arterial damage. We demonstrate that our machine learning model effectively captures visual features that provide valuable insights into an individual's overall cardiovascular health.

2.0CVDec 13, 2024
WordVIS: A Color Worth A Thousand Words

Umar Khan, Saifullah, Stefan Agne et al.

Document classification is considered a critical element in automated document processing systems. In recent years multi-modal approaches have become increasingly popular for document classification. Despite their improvements, these approaches are underutilized in the industry due to their requirement for a tremendous volume of training data and extensive computational power. In this paper, we attempt to address these issues by embedding textual features directly into the visual space, allowing lightweight image-based classifiers to achieve state-of-the-art results using small-scale datasets in document classification. To evaluate the efficacy of the visual features generated from our approach on limited data, we tested on the standard dataset Tobacco-3482. Our experiments show a tremendous improvement in image-based classifiers, achieving an improvement of 4.64% using ResNet50 with no document pre-training. It also sets a new record for the best accuracy of the Tobacco-3482 dataset with a score of 91.14% using the image-based DocXClassifier with no document pre-training. The simplicity of the approach, its resource requirements, and subsequent results provide a good prospect for its use in industrial use cases.

2.0LGDec 20, 2023
Class Conditional Time Series Generation with Structured Noise Space GAN

Hamidreza Gholamrezaei, Alireza Koochali, Andreas Dengel et al.

This paper introduces Structured Noise Space GAN (SNS-GAN), a novel approach in the field of generative modeling specifically tailored for class-conditional generation in both image and time series data. It addresses the challenge of effectively integrating class labels into generative models without requiring structural modifications to the network. The SNS-GAN method embeds class conditions within the generator's noise space, simplifying the training process and enhancing model versatility. The model's efficacy is demonstrated through qualitative validations in the image domain and superior performance in time series generation compared to baseline models. This research opens new avenues for the application of GANs in various domains, including but not limited to time series and image data generation.

2.0IRFeb 22, 2022
Utilizing Out-Domain Datasets to Enhance Multi-Task Citation Analysis

Dominique Mercier, Syed Tahseen Raza Rizvi, Vikas Rajashekar et al.

Citations are generally analyzed using only quantitative measures while excluding qualitative aspects such as sentiment and intent. However, qualitative aspects provide deeper insights into the impact of a scientific research artifact and make it possible to focus on relevant literature free from bias associated with quantitative aspects. Therefore, it is possible to rank and categorize papers based on their sentiment and intent. For this purpose, larger citation sentiment datasets are required. However, from a time and cost perspective, curating a large citation sentiment dataset is a challenging task. Particularly, citation sentiment analysis suffers from both data scarcity and tremendous costs for dataset annotation. To overcome the bottleneck of data scarcity in the citation analysis domain we explore the impact of out-domain data during training to enhance the model performance. Our results emphasize the use of different scheduling methods based on the use case. We empirically found that a model trained using sequential data scheduling is more suitable for domain-specific usecases. Conversely, shuffled data feeding achieves better performance on a cross-domain task. Based on our findings, we propose an end-to-end trainable multi-task model that covers the sentiment and intent analysis that utilizes out-domain datasets to overcome the data scarcity.

5.8LGFeb 16, 2022
TimeREISE: Time-series Randomized Evolving Input Sample Explanation

Dominique Mercier, Andreas Dengel, Sheraz Ahmed

Deep neural networks are one of the most successful classifiers across different domains. However, due to their limitations concerning interpretability their use is limited in safety critical context. The research field of explainable artificial intelligence addresses this problem. However, most of the interpretability methods are aligned to the image modality by design. The paper introduces TimeREISE a model agnostic attribution method specifically aligned to success in the context of time series classification. The method shows superior performance compared to existing approaches concerning different well-established measurements. TimeREISE is applicable to any time series classification network, its runtime does not scale in a linear manner concerning the input shape and it does not rely on prior data knowledge.

1.8LGFeb 8, 2022
KENN: Enhancing Deep Neural Networks by Leveraging Knowledge for Time Series Forecasting

Muhammad Ali Chattha, Ludger van Elst, Muhammad Imran Malik et al.

End-to-end data-driven machine learning methods often have exuberant requirements in terms of quality and quantity of training data which are often impractical to fulfill in real-world applications. This is specifically true in time series domain where problems like disaster prediction, anomaly detection, and demand prediction often do not have a large amount of historical data. Moreover, relying purely on past examples for training can be sub-optimal since in doing so we ignore one very important domain i.e knowledge, which has its own distinct advantages. In this paper, we propose a novel knowledge fusion architecture, Knowledge Enhanced Neural Network (KENN), for time series forecasting that specifically aims towards combining strengths of both knowledge and data domains while mitigating their individual weaknesses. We show that KENN not only reduces data dependency of the overall framework but also improves performance by producing predictions that are better than the ones produced by purely knowledge and data driven domains. We also compare KENN with state-of-the-art forecasting methods and show that predictions produced by KENN are significantly better even when trained on only 50\% of the data.

12.2AIFeb 8, 2022
Time to Focus: A Comprehensive Benchmark Using Time Series Attribution Methods

Dominique Mercier, Jwalin Bhatt, Andreas Dengel et al.

In the last decade neural network have made huge impact both in industry and research due to their ability to extract meaningful features from imprecise or complex data, and by achieving super human performance in several domains. However, due to the lack of transparency the use of these networks is hampered in the areas with safety critical areas. In safety-critical areas, this is necessary by law. Recently several methods have been proposed to uncover this black box by providing interpreation of predictions made by these models. The paper focuses on time series analysis and benchmark several state-of-the-art attribution methods which compute explanations for convolutional classifiers. The presented experiments involve gradient-based and perturbation-based attribution methods. A detailed analysis shows that perturbation-based approaches are superior concerning the Sensitivity and occlusion game. These methods tend to produce explanations with higher continuity. Contrarily, the gradient-based techniques are superb in runtime and Infidelity. In addition, a validation the dependence of the methods on the trained model, feasible application domains, and individual characteristics is attached. The findings accentuate that choosing the best-suited attribution method is strongly correlated with the desired use case. Neither category of attribution methods nor a single approach has shown outstanding performance across all aspects.

9.6LGJan 21, 2022
Random Noise vs State-of-the-Art Probabilistic Forecasting Methods : A Case Study on CRPS-Sum Discrimination Ability

Alireza Koochali, Peter Schichtel, Andreas Dengel et al.

The recent developments in the machine learning domain have enabled the development of complex multivariate probabilistic forecasting models. Therefore, it is pivotal to have a precise evaluation method to gauge the performance and predictability power of these complex methods. To do so, several evaluation metrics have been proposed in the past (such as Energy Score, Dawid-Sebastiani score, variogram score), however, they cannot reliably measure the performance of a probabilistic forecaster. Recently, CRPS-sum has gained a lot of prominence as a reliable metric for multivariate probabilistic forecasting. This paper presents a systematic evaluation of CRPS-sum to understand its discrimination ability. We show that the statistical properties of target data affect the discrimination ability of CRPS-Sum. Furthermore, we highlight that CRPS-Sum calculation overlooks the performance of the model on each dimension. These flaws can lead us to an incorrect assessment of model performance. Finally, with experiments on the real-world dataset, we demonstrate that the shortcomings of CRPS-Sum provide a misleading indication of the probabilistic forecasting performance method. We show that it is easily possible to have a better CRPS-Sum for a dummy model, which looks like random noise, in comparison to the state-of-the-art method.

16.7AIJan 4, 2022
ExAID: A Multimodal Explanation Framework for Computer-Aided Diagnosis of Skin Lesions

Adriano Lucieri, Muhammad Naseer Bajwa, Stephan Alexander Braun et al.

One principal impediment in the successful deployment of AI-based Computer-Aided Diagnosis (CAD) systems in clinical workflows is their lack of transparent decision making. Although commonly used eXplainable AI methods provide some insight into opaque algorithms, such explanations are usually convoluted and not readily comprehensible except by highly trained experts. The explanation of decisions regarding the malignancy of skin lesions from dermoscopic images demands particular clarity, as the underlying medical problem definition is itself ambiguous. This work presents ExAID (Explainable AI for Dermatology), a novel framework for biomedical image analysis, providing multi-modal concept-based explanations consisting of easy-to-understand textual explanations supplemented by visual maps justifying the predictions. ExAID relies on Concept Activation Vectors to map human concepts to those learnt by arbitrary Deep Learning models in latent space, and Concept Localization Maps to highlight concepts in the input space. This identification of relevant concepts is then used to construct fine-grained textual explanations supplemented by concept-wise location information to provide comprehensive and coherent multi-modal explanations. All information is comprehensively presented in a diagnostic interface for use in clinical routines. An educational mode provides dataset-level explanation statistics and tools for data and model exploration to aid medical research and education. Through rigorous quantitative and qualitative evaluation of ExAID, we show the utility of multi-modal explanations for CAD-assisted scenarios even in case of wrong predictions. We believe that ExAID will provide dermatologists an effective screening tool that they both understand and trust. Moreover, it will be the basis for similar applications in other biomedical imaging fields.

8.4LGNov 29, 2021Code
Evaluating Privacy-Preserving Machine Learning in Critical Infrastructures: A Case Study on Time-Series Classification

Dominique Mercier, Adriano Lucieri, Mohsin Munir et al.

With the advent of machine learning in applications of critical infrastructure such as healthcare and energy, privacy is a growing concern in the minds of stakeholders. It is pivotal to ensure that neither the model nor the data can be used to extract sensitive information used by attackers against individuals or to harm whole societies through the exploitation of critical infrastructure. The applicability of machine learning in these domains is mostly limited due to a lack of trust regarding the transparency and the privacy constraints. Various safety-critical use cases (mostly relying on time-series data) are currently underrepresented in privacy-related considerations. By evaluating several privacy-preserving methods regarding their applicability on time-series data, we validated the inefficacy of encryption for deep learning, the strong dataset dependence of differential privacy, and the broad applicability of federated methods.

1.2SIMay 26, 2021
Understanding Information Spreading Mechanisms During COVID-19 Pandemic by Analyzing the Impact of Tweet Text and User Features for Retweet Prediction

Pervaiz Iqbal Khan, Imran Razzak, Andreas Dengel et al.

COVID-19 has affected the world economy and the daily life routine of almost everyone. It has been a hot topic on social media platforms such as Twitter, Facebook, etc. These social media platforms enable users to share information with other users who can reshare this information, thus causing this information to spread. Twitter's retweet functionality allows users to share the existing content with other users without altering the original content. Analysis of social media platforms can help in detecting emergencies during pandemics that lead to taking preventive measures. One such type of analysis is predicting the number of retweets for a given COVID-19 related tweet. Recently, CIKM organized a retweet prediction challenge for COVID-19 tweets focusing on using numeric features only. However, our hypothesis is, tweet text may play a vital role in an accurate retweet prediction. In this paper, we combine numeric and text features for COVID-19 related retweet predictions. For this purpose, we propose two CNN and RNN based models and evaluate the performance of these models on a publicly available TweetsCOV19 dataset using seven different evaluation metrics. Our evaluation results show that combining tweet text with numeric features improves the performance of retweet prediction significantly.

17.8AIMay 14, 2021
XAI Handbook: Towards a Unified Framework for Explainable AI

Sebastian Palacio, Adriano Lucieri, Mohsin Munir et al.

The field of explainable AI (XAI) has quickly become a thriving and prolific community. However, a silent, recurrent and acknowledged issue in this area is the lack of consensus regarding its terminology. In particular, each new contribution seems to rely on its own (and often intuitive) version of terms like "explanation" and "interpretation". Such disarray encumbers the consolidation of advances in the field towards the fulfillment of scientific and regulatory demands e.g., when comparing methods or establishing their compliance with respect to biases and fairness constraints. We propose a theoretical framework that not only provides concrete definitions for these terms, but it also outlines all steps necessary to produce explanations and interpretations. The framework also allows for existing contributions to be re-contextualized such that their scope can be measured, thus making them comparable to other methods. We show that this framework is compliant with desiderata on explanations, on interpretability and on evaluation metrics. We present a use-case showing how the framework can be used to compare LIME, SHAP and MDNet, establishing their advantages and shortcomings. Finally, we discuss relevant trends in XAI as well as recommendations for future work, all from the standpoint of our framework.

2.6CVMar 2, 2021
Deep Learning Based Decision Support for Medicine -- A Case Study on Skin Cancer Diagnosis

Adriano Lucieri, Andreas Dengel, Sheraz Ahmed

Early detection of skin cancers like melanoma is crucial to ensure high chances of survival for patients. Clinical application of Deep Learning (DL)-based Decision Support Systems (DSS) for skin cancer screening has the potential to improve the quality of patient care. The majority of work in the medical AI community focuses on a diagnosis setting that is mainly relevant for autonomous operation. Practical decision support should, however, go beyond plain diagnosis and provide explanations. This paper provides an overview of works towards explainable, DL-based decision support in medical applications with the example of skin cancer diagnosis from clinical, dermoscopic and histopathologic images. Analysis reveals that comparably little attention is payed to the explanation of histopathologic skin images and that current work is dominated by visual relevance maps as well as dermoscopic feature identification. We conclude that future work should focus on meeting the stakeholder's cognitive concepts, providing exhaustive explanations that combine global and local approaches and leverage diverse modalities. Moreover, the possibility to intervene and guide models in case of misbehaviour is identified as a major step towards successful deployment of AI as DL-based DSS and beyond.

3.1LGFeb 11, 2021
PatchX: Explaining Deep Models by Intelligible Pattern Patches for Time-series Classification

Dominique Mercier, Andreas Dengel, Sheraz Ahmed

The classification of time-series data is pivotal for streaming data and comes with many challenges. Although the amount of publicly available datasets increases rapidly, deep neural models are only exploited in a few areas. Traditional methods are still used very often compared to deep neural models. These methods get preferred in safety-critical, financial, or medical fields because of their interpretable results. However, their performance and scale-ability are limited, and finding suitable explanations for time-series classification tasks is challenging due to the concepts hidden in the numerical time-series data. Visualizing complete time-series results in a cognitive overload concerning our perception and leads to confusion. Therefore, we believe that patch-wise processing of the data results in a more interpretable representation. We propose a novel hybrid approach that utilizes deep neural networks and traditional machine learning algorithms to introduce an interpretable and scale-able time-series classification approach. Our method first performs a fine-grained classification for the patches followed by sample level classification.

10.1CVDec 3, 2020
Going Beyond Classification Accuracy Metrics in Model Compression

Vinu Joseph, Shoaib Ahmed Siddiqui, Aditya Bhaskara et al.

With the rise in edge-computing devices, there has been an increasing demand to deploy energy and resource-efficient models. A large body of research has been devoted to developing methods that can reduce the size of the model considerably without affecting the standard metrics such as top-1 accuracy. However, these pruning approaches tend to result in a significant mismatch in other metrics such as fairness across classes and explainability. To combat such misalignment, we propose a novel multi-part loss function inspired by the knowledge-distillation literature. Through extensive experiments, we demonstrate the effectiveness of our approach across different compression algorithms, architectures, tasks as well as datasets. In particular, we obtain up to $4.1\times$ reduction in the number of prediction mismatches between the compressed and reference models, and up to $5.7\times$ in cases where the reference model makes the correct prediction; all while making no changes to the compression algorithm, and minor modifications to the loss function. Furthermore, we demonstrate how inducing simple alignment between the predictions of the models naturally improves the alignment on other metrics including fairness and attributions. Our framework can thus serve as a simple plug-and-play component for compression algorithms in the future.

12.3AINov 26, 2020
Achievements and Challenges in Explaining Deep Learning based Computer-Aided Diagnosis Systems

Adriano Lucieri, Muhammad Naseer Bajwa, Andreas Dengel et al.

Remarkable success of modern image-based AI methods and the resulting interest in their applications in critical decision-making processes has led to a surge in efforts to make such intelligent systems transparent and explainable. The need for explainable AI does not stem only from ethical and moral grounds but also from stricter legislation around the world mandating clear and justifiable explanations of any decision taken or assisted by AI. Especially in the medical context where Computer-Aided Diagnosis can have a direct influence on the treatment and well-being of patients, transparency is of utmost importance for safe transition from lab research to real world clinical practice. This paper provides a comprehensive overview of current state-of-the-art in explaining and interpreting Deep Learning based algorithms in applications of medical research and diagnosis of diseases. We discuss early achievements in development of explainable AI for validation of known disease criteria, exploration of new potential biomarkers, as well as methods for the subsequent correction of AI models. Various explanation methods like visual, textual, post-hoc, ante-hoc, local and global have been thoroughly and critically analyzed. Subsequently, we also highlight some of the remaining challenges that stand in the way of practical applications of AI as a clinical decision support tool and provide recommendations for the direction of future research.

3.3LGAug 30, 2020
Benchmarking adversarial attacks and defenses for time-series data

Shoaib Ahmed Siddiqui, Andreas Dengel, Sheraz Ahmed

The adversarial vulnerability of deep networks has spurred the interest of researchers worldwide. Unsurprisingly, like images, adversarial examples also translate to time-series data as they are an inherent weakness of the model itself rather than the modality. Several attempts have been made to defend against these adversarial attacks, particularly for the visual modality. In this paper, we perform detailed benchmarking of well-proven adversarial defense methodologies on time-series data. We restrict ourselves to the $L_{\infty}$ threat model. We also explore the trade-off between smoothness and clean accuracy for regularization-based defenses to better understand the trade-offs that they offer. Our analysis shows that the explored adversarial defenses offer robustness against both strong white-box as well as black-box attacks. This paves the way for future research in the direction of adversarial attacks and defenses, particularly for time-series data.

1.1CLMay 5, 2020Code
ImpactCite: An XLNet-based method for Citation Impact Analysis

Dominique Mercier, Syed Tahseen Raza Rizvi, Vikas Rajashekar et al.

Citations play a vital role in understanding the impact of scientific literature. Generally, citations are analyzed quantitatively whereas qualitative analysis of citations can reveal deeper insights into the impact of a scientific artifact in the community. Therefore, citation impact analysis (which includes sentiment and intent classification) enables us to quantify the quality of the citations which can eventually assist us in the estimation of ranking and impact. The contribution of this paper is two-fold. First, we benchmark the well-known language models like BERT and ALBERT along with several popular networks for both tasks of sentiment and intent classification. Second, we provide ImpactCite, which is XLNet-based method for citation impact analysis. All evaluations are performed on a set of publicly available citation analysis datasets. Evaluation results reveal that ImpactCite achieves a new state-of-the-art performance for both citation intent and sentiment classification by outperforming the existing approaches by 3.44% and 1.33% in F1-score. Therefore, we emphasize ImpactCite (XLNet-based solution) for both tasks to better understand the impact of a citation. Additional efforts have been performed to come up with CSC-Clean corpus, which is a clean and reliable dataset for citation sentiment classification.

18.1LGMay 5, 2020
On Interpretability of Deep Learning based Skin Lesion Classifiers using Concept Activation Vectors

Adriano Lucieri, Muhammad Naseer Bajwa, Stephan Alexander Braun et al.

Deep learning based medical image classifiers have shown remarkable prowess in various application areas like ophthalmology, dermatology, pathology, and radiology. However, the acceptance of these Computer-Aided Diagnosis (CAD) systems in real clinical setups is severely limited primarily because their decision-making process remains largely obscure. This work aims at elucidating a deep learning based medical image classifier by verifying that the model learns and utilizes similar disease-related concepts as described and employed by dermatologists. We used a well-trained and high performing neural network developed by REasoning for COmplex Data (RECOD) Lab for classification of three skin tumours, i.e. Melanocytic Naevi, Melanoma and Seborrheic Keratosis and performed a detailed analysis on its latent space. Two well established and publicly available skin disease datasets, PH2 and derm7pt, are used for experimentation. Human understandable concepts are mapped to RECOD image classification model with the help of Concept Activation Vectors (CAVs), introducing a novel training and significance testing paradigm for CAVs. Our results on an independent evaluation set clearly shows that the classifier learns and encodes human understandable concepts in its latent representation. Additionally, TCAV scores (Testing with CAVs) suggest that the neural network indeed makes use of disease-related concepts in the correct way when making predictions. We anticipate that this work can not only increase confidence of medical practitioners on CAD but also serve as a stepping stone for further development of CAV-based neural network interpretation methods.

5.8LGMay 5, 2020Code
Interpreting Deep Models through the Lens of Data

Dominique Mercier, Shoaib Ahmed Siddiqui, Andreas Dengel et al.

Identification of input data points relevant for the classifier (i.e. serve as the support vector) has recently spurred the interest of researchers for both interpretability as well as dataset debugging. This paper presents an in-depth analysis of the methods which attempt to identify the influence of these data points on the resulting classifier. To quantify the quality of the influence, we curated a set of experiments where we debugged and pruned the dataset based on the influence information obtained from different methods. To do so, we provided the classifier with mislabeled examples that hampered the overall performance. Since the classifier is a combination of both the data and the model, therefore, it is essential to also analyze these influences for the interpretability of deep learning models. Analysis of the results shows that some interpretability methods can detect mislabels better than using a random approach, however, contrary to the claim of these methods, the sample selection based on the training loss showed a superior performance.

11.1LGMay 4, 2020Code
Explaining AI-based Decision Support Systems using Concept Localization Maps

Adriano Lucieri, Muhammad Naseer Bajwa, Andreas Dengel et al.

Human-centric explainability of AI-based Decision Support Systems (DSS) using visual input modalities is directly related to reliability and practicality of such algorithms. An otherwise accurate and robust DSS might not enjoy trust of experts in critical application areas if it is not able to provide reasonable justification of its predictions. This paper introduces Concept Localization Maps (CLMs), which is a novel approach towards explainable image classifiers employed as DSS. CLMs extend Concept Activation Vectors (CAVs) by locating significant regions corresponding to a learned concept in the latent space of a trained image classifier. They provide qualitative and quantitative assurance of a classifier's ability to learn and focus on similar concepts important for humans during image recognition. To better understand the effectiveness of the proposed method, we generated a new synthetic dataset called Simple Concept DataBase (SCDB) that includes annotations for 10 distinguishable concepts, and made it publicly available. We evaluated our proposed method on SCDB as well as a real-world dataset called CelebA. We achieved localization recall of above 80% for most relevant concepts and average recall above 60% for all concepts using SE-ResNeXt-50 on SCDB. Our results on both datasets show great promise of CLMs for easing acceptance of DSS in practice.

11.3COMP-PHApr 19, 2020Code
DeepCFD: Efficient Steady-State Laminar Flow Approximation with Deep Convolutional Neural Networks

Mateus Dias Ribeiro, Abdul Rehman, Sheraz Ahmed et al.

Computational Fluid Dynamics (CFD) simulation by the numerical solution of the Navier-Stokes equations is an essential tool in a wide range of applications from engineering design to climate modeling. However, the computational cost and memory demand required by CFD codes may become very high for flows of practical interest, such as in aerodynamic shape optimization. This expense is associated with the complexity of the fluid flow governing equations, which include non-linear partial derivative terms that are of difficult solution, leading to long computational times and limiting the number of hypotheses that can be tested during the process of iterative design. Therefore, we propose DeepCFD: a convolutional neural network (CNN) based model that efficiently approximates solutions for the problem of non-uniform steady laminar flows. The proposed model is able to learn complete solutions of the Navier-Stokes equations, for both velocity and pressure fields, directly from ground-truth data generated using a state-of-the-art CFD code. Using DeepCFD, we found a speedup of up to 3 orders of magnitude compared to the standard CFD approach at a cost of low error rates.

8.5LGApr 6, 2020
TSInsight: A local-global attribution framework for interpretability in time-series data

Shoaib Ahmed Siddiqui, Dominique Mercier, Andreas Dengel et al.

With the rise in the employment of deep learning methods in safety-critical scenarios, interpretability is more essential than ever before. Although many different directions regarding interpretability have been explored for visual modalities, time-series data has been neglected with only a handful of methods tested due to their poor intelligibility. We approach the problem of interpretability in a novel way by proposing TSInsight where we attach an auto-encoder to the classifier with a sparsity-inducing norm on its output and fine-tune it based on the gradients from the classifier and a reconstruction penalty. TSInsight learns to preserve features that are important for prediction by the classifier and suppresses those that are irrelevant i.e. serves as a feature attribution method to boost interpretability. In contrast to most other attribution frameworks, TSInsight is capable of generating both instance-based and model-based explanations. We evaluated TSInsight along with 9 other commonly used attribution methods on 8 different time-series datasets to validate its efficacy. Evaluation results show that TSInsight naturally achieves output space contraction, therefore, is an effective tool for the interpretability of deep time-series models.

1.2GNDec 23, 2019
A Robust and Precise ConvNet for small non-coding RNA classification (RPC-snRC)

Muhammad Nabeel Asima, Muhammad Imran Malik, Andreas Dengela et al.

Functional or non-coding RNAs are attracting more attention as they are now potentially considered valuable resources in the development of new drugs intended to cure several human diseases. The identification of drugs targeting the regulatory circuits of functional RNAs depends on knowing its family, a task which is known as RNA sequence classification. State-of-the-art small noncoding RNA classification methodologies take secondary structural features as input. However, in such classification, feature extraction approaches only take global characteristics into account and completely oversight co-relative effect of local structures. Furthermore secondary structure based approaches incorporate high dimensional feature space which proves computationally expensive. This paper proposes a novel Robust and Precise ConvNet (RPC-snRC) methodology which classifies small non-coding RNAs sequences into their relevant families by utilizing the primary sequence of RNAs. RPC-snRC methodology learns hierarchical representation of features by utilizing positioning and occurrences information of nucleotides. To avoid exploding and vanishing gradient problems, we use an approach similar to DenseNet in which gradient can flow straight from subsequent layers to previous layers. In order to assess the effectiveness of deeper architectures for small non-coding RNA classification, we also adapted two ResNet architectures having different number of layers. Experimental results on a benchmark small non-coding RNA dataset show that our proposed methodology does not only outperform existing small non-coding RNA classification approaches with a significant performance margin of 10% but it also outshines adapted ResNet architectures.

1.8CVDec 16, 2019
A Hybrid Approach and Unified Framework for Bibliographic Reference Extraction

Syed Tahseen Raza Rizvi, Andreas Dengel, Sheraz Ahmed

Publications are an integral part in a scientific community. Bibliographic reference extraction from scientific publication is a challenging task due to diversity in referencing styles and document layout. Existing methods perform sufficiently on one dataset however, applying these solutions to a different dataset proves to be challenging. Therefore, a generic solution was anticipated which could overcome the limitations of the previous approaches. The contribution of this paper is three-fold. First, it presents a novel approach called DeepBiRD which is inspired by human visual perception and exploits layout features to identify individual references in a scientific publication. Second, we release a large dataset for image-based reference detection with 2401 scans containing 38863 references, all manually annotated for individual reference. Third, we present a unified and highly configurable end-to-end automatic bibliographic reference extraction framework called BRExSys which employs DeepBiRD along with state-of-the-art text-based models to detect and visualize references from a bibliographic document. Our proposed approach pre-processes the images in which a hybrid representation is obtained by processing the given image using different computer vision techniques. Then, it performs layout driven reference detection using Mask R-CNN on a given scientific publication. DeepBiRD was evaluated on two different datasets to demonstrate the generalization of this approach. The proposed system achieved an AP50 of 98.56% on our dataset. DeepBiRD significantly outperformed the current state-of-the-art approach on their dataset. Therefore, suggesting that DeepBiRD is significantly superior in performance, generalized, and independent of any domain or referencing style.

0.5CLOct 7, 2019
SentiCite: An Approach for Publication Sentiment Analysis

Dominique Mercier, Akansha Bhardwaj, Andreas Dengel et al.

With the rapid growth in the number of scientific publications, year after year, it is becoming increasingly difficult to identify quality authoritative work on a single topic. Though there is an availability of scientometric measures which promise to offer a solution to this problem, these measures are mostly quantitative and rely, for instance, only on the number of times an article is cited. With this approach, it becomes irrelevant if an article is cited 10 times in a positive, negative or neutral way. In this context, it is quite important to study the qualitative aspect of a citation to understand its significance. This paper presents a novel system for sentiment analysis of citations in scientific documents (SentiCite) and is also capable of detecting nature of citations by targeting the motivation behind a citation, e.g., reference to a dataset, reading reference. Furthermore, the paper also presents two datasets (SentiCiteDB and IntentCiteDB) containing about 2,600 citations with their ground truth for sentiment and nature of citation. SentiCite along with other state-of-the-art methods for sentiment analysis are evaluated on the presented datasets. Evaluation results reveal that SentiCite outperforms state-of-the-art methods for sentiment analysis in scientific publications by achieving a F1-measure of 0.71.

0.9CLSep 12, 2019
A Robust Hybrid Approach for Textual Document Classification

Muhammad Nabeel Asim, Muhammad Usman Ghani Khan, Muhammad Imran Malik et al.

Text document classification is an important task for diverse natural language processing based applications. Traditional machine learning approaches mainly focused on reducing dimensionality of textual data to perform classification. This although improved the overall classification accuracy, the classifiers still faced sparsity problem due to lack of better data representation techniques. Deep learning based text document classification, on the other hand, benefitted greatly from the invention of word embeddings that have solved the sparsity problem and researchers focus mainly remained on the development of deep architectures. Deeper architectures, however, learn some redundant features that limit the performance of deep learning based solutions. In this paper, we propose a two stage text document classification methodology which combines traditional feature engineering with automatic feature engineering (using deep learning). The proposed methodology comprises a filter based feature selection (FSE) algorithm followed by a deep convolutional neural network. This methodology is evaluated on the two most commonly used public datasets, i.e., 20 Newsgroups data and BBC news data. Evaluation results reveal that the proposed methodology outperforms the state-of-the-art of both the (traditional) machine learning and deep learning based text document classification methodologies with a significant margin of 7.7% on 20 Newsgroups and 6.6% on BBC news datasets.

1.0LGMay 31, 2019
L0 Regularization Based Neural Network Design and Compression

S. Asim Ahmed

We consider complexity of Deep Neural Networks (DNNs) and their associated massive over-parameterization. Such over-parametrization may entail susceptibility to adversarial attacks, loss of interpretability and adverse Size, Weight and Power - Cost (SWaP-C) considerations. We ask if there are methodical ways (regularization) to reduce complexity and how can we interpret trade-off between desired metric and complexity of DNN. Reducing complexity is directly applicable to scaling of AI applications to real world problems (especially for off-the-cloud applications). We show that presence and evaluation of the knee of the tradeoff curve. We apply a form of L0 regularization to MNIST data and signal modulation classifications. We show that such regularization captures saliency in the input space as well.

8.1LGMar 29, 2019
Probabilistic Forecasting of Sensory Data with Generative Adversarial Networks - ForGAN

Alireza Koochali, Peter Schichtel, Sheraz Ahmed et al.

Time series forecasting is one of the challenging problems for humankind. Traditional forecasting methods using mean regression models have severe shortcomings in reflecting real-world fluctuations. While new probabilistic methods rush to rescue, they fight with technical difficulties like quantile crossing or selecting a prior distribution. To meld the different strengths of these fields while avoiding their weaknesses as well as to push the boundary of the state-of-the-art, we introduce ForGAN - one step ahead probabilistic forecasting with generative adversarial networks. ForGAN utilizes the power of the conditional generative adversarial network to learn the data generating distribution and compute probabilistic forecasts from it. We argue how to evaluate ForGAN in opposition to regression methods. To investigate probabilistic forecasting of ForGAN, we create a new dataset and demonstrate our method abilities on it. This dataset will be made publicly available for comparison. Furthermore, we test ForGAN on two publicly available datasets, namely Mackey-Glass dataset and Internet traffic dataset (A5M) where the impressive performance of ForGAN demonstrate its high capability in forecasting future values.

7.1LGFeb 15, 2019
KINN: Incorporating Expert Knowledge in Neural Networks

Muhammad Ali Chattha, Shoaib Ahmed Siddiqui, Muhammad Imran Malik et al.

The promise of ANNs to automatically discover and extract useful features/patterns from data without dwelling on domain expertise although seems highly promising but comes at the cost of high reliance on large amount of accurately labeled data, which is often hard to acquire and formulate especially in time-series domains like anomaly detection, natural disaster management, predictive maintenance and healthcare. As these networks completely rely on data and ignore a very important modality i.e. expert, they are unable to harvest any benefit from the expert knowledge, which in many cases is very useful. In this paper, we try to bridge the gap between these data driven and expert knowledge based systems by introducing a novel framework for incorporating expert knowledge into the network (KINN). Integrating expert knowledge into the network has three key advantages: (a) Reduction in the amount of data needed to train the model, (b) provision of a lower bound on the performance of the resulting classifier by obtaining the best of both worlds, and (c) improved convergence of model parameters (model converges in smaller number of epochs). Although experts are extremely good in solving different tasks, there are some trends and patterns, which are usually hidden only in the data. Therefore, KINN employs a novel residual knowledge incorporation scheme, which can automatically determine the quality of the predictions made by the expert and rectify it accordingly by learning the trends/patterns from data. Specifically, the method tries to use information contained in one modality to complement information missed by the other. We evaluated KINN on a real world traffic flow prediction problem. KINN significantly superseded performance of both the expert and as well as the base network (LSTM in this case) when evaluated in isolation, highlighting its superiority for the task.

0.8LGNov 14, 2018
Deep Neural Networks based Modrec: Some Results with Inter-Symbol Interference and Adversarial Examples

S. Asim Ahmed, Subhashish Chakravarty, Michael Newhouse

Recent successes and advances in Deep Neural Networks (DNN) in machine vision and Natural Language Processing (NLP) have motivated their use in traditional signal processing and communications systems. In this paper, we present results of such applications to the problem of automatic modulation recognition. Variations in wireless communication channels are represented by statistical channel models and their parameterization will increase with the advent of 5G. In this paper, we report effect of simple two path channel model on our naive deep neural network based implementation. We also report impact of adversarial perturbation to the input signal.