Jiang Tian

Yang Liu, Yao Zhang, Yixin Wang et al.

Recently, the dominant DETR-based approaches apply central-concept spatial prior to accelerate Transformer detector convergency. These methods gradually refine the reference points to the center of target objects and imbue object queries with the updated central reference information for spatially conditional attention. However, centralizing reference points may severely deteriorate queries' saliency and confuse detectors due to the indiscriminative spatial prior. To bridge the gap between the reference points of salient queries and Transformer detectors, we propose SAlient Point-based DETR (SAP-DETR) by treating object detection as a transformation from salient points to instance objects. In SAP-DETR, we explicitly initialize a query-specific reference point for each object query, gradually aggregate them into an instance object, and then predict the distance from each side of the bounding box to these points. By rapidly attending to query-specific reference region and other conditional extreme regions from the image features, SAP-DETR can effectively bridge the gap between the salient point and the query-based Transformer detector with a significant convergency speed. Our extensive experiments have demonstrated that SAP-DETR achieves 1.4 times convergency speed with competitive performance. Under the standard training scheme, SAP-DETR stably promotes the SOTA approaches by 1.0 AP. Based on ResNet-DC-101, SAP-DETR achieves 46.9 AP.

Yao Zhang, Jiawei Yang, Yang Liu et al.

Purpose: Automated liver tumor segmentation from Computed Tomography (CT) images is a necessary prerequisite in the interventions of hepatic abnormalities and surgery planning. However, accurate liver tumor segmentation remains challenging due to the large variability of tumor sizes and inhomogeneous texture. Recent advances based on Fully Convolutional Network (FCN) for medical image segmentation drew on the success of learning discriminative pyramid features. In this paper, we propose a Decoupled Pyramid Correlation Network (DPC-Net) that exploits attention mechanisms to fully leverage both low- and high-level features embedded in FCN to segment liver tumor. Methods: We first design a powerful Pyramid Feature Encoder (PFE) to extract multi-level features from input images. Then we decouple the characteristics of features concerning spatial dimension (i.e., height, width, depth) and semantic dimension (i.e., channel). On top of that, we present two types of attention modules, Spatial Correlation (SpaCor) and Semantic Correlation (SemCor) modules, to recursively measure the correlation of multi-level features. The former selectively emphasizes global semantic information in low-level features with the guidance of high-level ones. The latter adaptively enhance spatial details in high-level features with the guidance of low-level ones. Results: We evaluate the DPC-Net on MICCAI 2017 LiTS Liver Tumor Segmentation (LiTS) challenge dataset. Dice Similarity Coefficient (DSC) and Average Symmetric Surface Distance (ASSD) are employed for evaluation. The proposed method obtains a DSC of 76.4% and an ASSD of 0.838 mm for liver tumor segmentation, outperforming the state-of-the-art methods. It also achieves a competitive results with a DSC of 96.0% and an ASSD of 1.636 mm for liver segmentation.

Yaohui Zhu, Linhu Liu, Jiang Tian

Food recognition has a wide range of applications, such as health-aware recommendation and self-service restaurants. Most previous methods of food recognition firstly locate informative regions in some weakly-supervised manners and then aggregate their features. However, location errors of informative regions limit the effectiveness of these methods to some extent. Instead of locating multiple regions, we propose a Progressive Self-Distillation (PSD) method, which progressively enhances the ability of network to mine more details for food recognition. The training of PSD simultaneously contains multiple self-distillations, in which a teacher network and a student network share the same embedding network. Since the student network receives a modified image from its teacher network by masking some informative regions, the teacher network outputs stronger semantic representations than the student network. Guided by such teacher network with stronger semantics, the student network is encouraged to mine more useful regions from the modified image by enhancing its own ability. The ability of the teacher network is also enhanced with the shared embedding network. By using progressive training, the teacher network incrementally improves its ability to mine more discriminative regions. In inference phase, only the teacher network is used without the help of the student network. Extensive experiments on three datasets demonstrate the effectiveness of our proposed method and state-of-the-art performance.

Xinda Liu, Yaohui Zhu, Linhu Liu et al.

Most previous approaches for analyzing food images have relied on extensively annotated datasets, resulting in significant human labeling expenses due to the varied and intricate nature of such images. Inspired by the effectiveness of contrastive self-supervised methods in utilizing unlabelled data, we explore leveraging these techniques on unlabelled food images. In contrastive self-supervised methods, two views are randomly generated from an image by data augmentations. However, regarding food images, the two views tend to contain similar informative contents, causing large mutual information, which impedes the efficacy of contrastive self-supervised learning. To address this problem, we propose Feature Suppressed Contrast (FeaSC) to reduce mutual information between views. As the similar contents of the two views are salient or highly responsive in the feature map, the proposed FeaSC uses a response-aware scheme to localize salient features in an unsupervised manner. By suppressing some salient features in one view while leaving another contrast view unchanged, the mutual information between the two views is reduced, thereby enhancing the effectiveness of contrast learning for self-supervised food pre-training. As a plug-and-play module, the proposed method consistently improves BYOL and SimSiam by 1.70\% $\sim$ 6.69\% classification accuracy on four publicly available food recognition datasets. Superior results have also been achieved on downstream segmentation tasks, demonstrating the effectiveness of the proposed method.

Fanglan Zheng, Menghan Wang, Kun Li et al.

In this manuscript (ms), we propose causal inference based single-branch ensemble trees for uplift modeling, namely CIET. Different from standard classification methods for predictive probability modeling, CIET aims to achieve the change in the predictive probability of outcome caused by an action or a treatment. According to our CIET, two partition criteria are specifically designed to maximize the difference in outcome distribution between the treatment and control groups. Next, a novel single-branch tree is built by taking a top-down node partition approach, and the remaining samples are censored since they are not covered by the upper node partition logic. Repeating the tree-building process on the censored data, single-branch ensemble trees with a set of inference rules are thus formed. Moreover, CIET is experimentally demonstrated to outperform previous approaches for uplift modeling in terms of both area under uplift curve (AUUC) and Qini coefficient significantly. At present, CIET has already been applied to online personal loans in a national financial holdings group in China. CIET will also be of use to analysts applying machine learning techniques to causal inference in broader business domains such as web advertising, medicine and economics.

Yang Liu, Yao Zhang, Yixin Wang et al.

Transformer, an attention-based encoder-decoder model, has already revolutionized the field of natural language processing (NLP). Inspired by such significant achievements, some pioneering works have recently been done on employing Transformer-liked architectures in the computer vision (CV) field, which have demonstrated their effectiveness on three fundamental CV tasks (classification, detection, and segmentation) as well as multiple sensory data stream (images, point clouds, and vision-language data). Because of their competitive modeling capabilities, the visual Transformers have achieved impressive performance improvements over multiple benchmarks as compared with modern Convolution Neural Networks (CNNs). In this survey, we have reviewed over one hundred of different visual Transformers comprehensively according to three fundamental CV tasks and different data stream types, where a taxonomy is proposed to organize the representative methods according to their motivations, structures, and application scenarios. Because of their differences on training settings and dedicated vision tasks, we have also evaluated and compared all these existing visual Transformers under different configurations. Furthermore, we have revealed a series of essential but unexploited aspects that may empower such visual Transformers to stand out from numerous architectures, e.g., slack high-level semantic embeddings to bridge the gap between the visual Transformers and the sequential ones. Finally, three promising research directions are suggested for future investment. We will continue to update the latest articles and their released source codes at https://github.com/liuyang-ict/awesome-visual-transformers.

Yao Zhang, Jiawei Yang, Jiang Tian et al.

Liver cancer is one of the most common cancers worldwide. Due to inconspicuous texture changes of liver tumor, contrast-enhanced computed tomography (CT) imaging is effective for the diagnosis of liver cancer. In this paper, we focus on improving automated liver tumor segmentation by integrating multi-modal CT images. To this end, we propose a novel mutual learning (ML) strategy for effective and robust multi-modal liver tumor segmentation. Different from existing multi-modal methods that fuse information from different modalities by a single model, with ML, an ensemble of modality-specific models learn collaboratively and teach each other to distill both the characteristics and the commonality between high-level representations of different modalities. The proposed ML not only enables the superiority for multi-modal learning but can also handle missing modalities by transferring knowledge from existing modalities to missing ones. Additionally, we present a modality-aware (MA) module, where the modality-specific models are interconnected and calibrated with attention weights for adaptive information exchange. The proposed modality-aware mutual learning (MAML) method achieves promising results for liver tumor segmentation on a large-scale clinical dataset. Moreover, we show the efficacy and robustness of MAML for handling missing modalities on both the liver tumor and public brain tumor (BRATS 2018) datasets. Our code is available at https://github.com/YaoZhang93/MAML.

Zheng Wang, Dong Xie, Hanzhi Wang et al.

Learning from the limited amount of labeled data to the pre-train model has always been viewed as a challenging task. In this report, an effective and robust solution, the two-stage training paradigm YOLOv8 detector (TP-YOLOv8), is designed for the object detection track in VIPriors Challenge 2023. First, the backbone of YOLOv8 is pre-trained as the encoder using the masked image modeling technique. Then the detector is fine-tuned with elaborate augmentations. During the test stage, test-time augmentation (TTA) is used to enhance each model, and weighted box fusion (WBF) is implemented to further boost the performance. With the well-designed structure, our approach has achieved 30.4% average precision from 0.50 to 0.95 on the DelftBikes test set, ranking 4th on the leaderboard.

Yepeng Weng, Dianwen Mei, Huishi Qiu et al.

Speculative decoding is a powerful technique that accelerates Large Language Model (LLM) inference by leveraging a lightweight speculative draft model. However, existing designs suffers in performance due to misalignment between training and inference. Recent methods have tried to solve this issue by adopting a multi-step training strategy, but the complex inputs of different training steps make it harder for the draft model to converge. To address this, we propose CORAL, a novel framework that improves both accuracy and efficiency in speculative drafting. CORAL introduces Cross-Step Representation Alignment, a method that enhances consistency across multiple training steps, significantly improving speculative drafting performance. Additionally, we identify the LM head as a major bottleneck in the inference speed of the draft model. We introduce a weight-grouping mechanism that selectively activates a subset of LM head parameters during inference, substantially reducing the latency of the draft model. We evaluate CORAL on three LLM families and three benchmark datasets, achieving speedup ratios of 2.50x-4.07x, outperforming state-of-the-art methods such as EAGLE-2 and HASS. Our results demonstrate that CORAL effectively mitigates training-inference misalignment and delivers significant speedup for modern LLMs with large vocabularies.

Yepeng Weng, Qiao Hu, Xujie Chen et al.

Speculative decoding is a promising approach for accelerating large language models. The primary idea is to use a lightweight draft model to speculate the output of the target model for multiple subsequent timesteps, and then verify them in parallel to determine whether the drafted tokens should be accepted or rejected. To enhance acceptance rates, existing frameworks typically construct token trees containing multiple candidates in each timestep. However, their reliance on token-level verification mechanisms introduces two critical limitations: First, the probability distribution of a sequence differs from that of individual tokens, leading to suboptimal acceptance length. Second, current verification schemes begin from the root node and proceed layer by layer in a top-down manner. Once a parent node is rejected, all its child nodes should be discarded, resulting in inefficient utilization of speculative candidates. This paper introduces Traversal Verification, a novel speculative decoding algorithm that fundamentally rethinks the verification paradigm through leaf-to-root traversal. Our approach considers the acceptance of the entire token sequence from the current node to the root, and preserves potentially valid subsequences that would be prematurely discarded by existing methods. We theoretically prove that the probability distribution obtained through Traversal Verification is identical to that of the target model, guaranteeing lossless inference while achieving substantial acceleration gains. Experimental results across different large language models and multiple tasks show that our method consistently improves acceptance length and throughput over existing methods.

Yixin Wang, Yang Zhang, Yang Liu et al.

Accurate segmentation of brain tumors from magnetic resonance imaging (MRI) is clinically relevant in diagnoses, prognoses and surgery treatment, which requires multiple modalities to provide complementary morphological and physiopathologic information. However, missing modality commonly occurs due to image corruption, artifacts, different acquisition protocols or allergies to certain contrast agents in clinical practice. Though existing efforts demonstrate the possibility of a unified model for all missing situations, most of them perform poorly when more than one modality is missing. In this paper, we propose a novel Adversarial Co-training Network (ACN) to solve this issue, in which a series of independent yet related models are trained dedicated to each missing situation with significantly better results. Specifically, ACN adopts a novel co-training network, which enables a coupled learning process for both full modality and missing modality to supplement each other's domain and feature representations, and more importantly, to recover the `missing' information of absent modalities. Then, two unsupervised modules, i.e., entropy and knowledge adversarial learning modules are proposed to minimize the domain gap while enhancing prediction reliability and encouraging the alignment of latent representations, respectively. We also adapt modality-mutual information knowledge transfer learning to ACN to retain the rich mutual information among modalities. Extensive experiments on BraTS2018 dataset show that our proposed method significantly outperforms all state-of-the-art methods under any missing situation.

Yixin Wang, Zihao Lin, Zhe Xu et al.

Medical imaging plays a pivotal role in diagnosis and treatment in clinical practice. Inspired by the significant progress in automatic image captioning, various deep learning (DL)-based methods have been proposed to generate radiology reports for medical images. Despite promising results, previous works overlook the uncertainties of their models and are thus unable to provide clinicians with the reliability/confidence of the generated radiology reports to assist their decision-making. In this paper, we propose a novel method to explicitly quantify both the visual uncertainty and the textual uncertainty for DL-based radiology report generation. Such multi-modal uncertainties can sufficiently capture the model confidence degree at both the report level and the sentence level, and thus they are further leveraged to weight the losses for more comprehensive model optimization. Experimental results have demonstrated that the proposed method for model uncertainty characterization and estimation can produce more reliable confidence scores for radiology report generation, and the modified loss function, which takes into account the uncertainties, leads to better model performance on two public radiology report datasets. In addition, the quality of the automatically generated reports was manually evaluated by human raters and the results also indicate that the proposed uncertainties can reflect the variance of clinical diagnosis.

Yao Zhang, Jiawei Yang, Feng Hou et al.

Accurate segmentation of cardiac structures can assist doctors to diagnose diseases, and to improve treatment planning, which is highly demanded in the clinical practice. However, the shortage of annotation and the variance of the data among different vendors and medical centers restrict the performance of advanced deep learning methods. In this work, we present a fully automatic method to segment cardiac structures including the left (LV) and right ventricle (RV) blood pools, as well as for the left ventricular myocardium (MYO) in MRI volumes. Specifically, we design a semi-supervised learning method to leverage unlabelled MRI sequence timeframes by label propagation. Then we exploit style transfer to reduce the variance among different centers and vendors for more robust cardiac image segmentation. We evaluate our method in the M&Ms challenge 7 , ranking 2nd place among 14 competitive teams.

Yixin Wang, Yao Zhang, Jiang Tian et al.

Though deep learning has achieved advanced performance recently, it remains a challenging task in the field of medical imaging, as obtaining reliable labeled training data is time-consuming and expensive. In this paper, we propose a double-uncertainty weighted method for semi-supervised segmentation based on the teacher-student model. The teacher model provides guidance for the student model by penalizing their inconsistent prediction on both labeled and unlabeled data. We train the teacher model using Bayesian deep learning to obtain double-uncertainty, i.e. segmentation uncertainty and feature uncertainty. It is the first to extend segmentation uncertainty estimation to feature uncertainty, which reveals the capability to capture information among channels. A learnable uncertainty consistency loss is designed for the unsupervised learning process in an interactive manner between prediction and uncertainty. With no ground-truth for supervision, it can still incentivize more accurate teacher's predictions and facilitate the model to reduce uncertain estimations. Furthermore, our proposed double-uncertainty serves as a weight on each inconsistency penalty to balance and harmonize supervised and unsupervised training processes. We validate the proposed feature uncertainty and loss function through qualitative and quantitative analyses. Experimental results show that our method outperforms the state-of-the-art uncertainty-based semi-supervised methods on two public medical datasets.

Yixin Wang, Yao Zhang, Feng Hou et al.

Automatic brain tumor segmentation from multi-modality Magnetic Resonance Images (MRI) using deep learning methods plays an important role in assisting the diagnosis and treatment of brain tumor. However, previous methods mostly ignore the latent relationship among different modalities. In this work, we propose a novel end-to-end Modality-Pairing learning method for brain tumor segmentation. Paralleled branches are designed to exploit different modality features and a series of layer connections are utilized to capture complex relationships and abundant information among modalities. We also use a consistency loss to minimize the prediction variance between two branches. Besides, learning rate warmup strategy is adopted to solve the problem of the training instability and early over-fitting. Lastly, we use average ensemble of multiple models and some post-processing techniques to get final results. Our method is tested on the BraTS 2020 online testing dataset, obtaining promising segmentation performance, with average dice scores of 0.891, 0.842, 0.816 for the whole tumor, tumor core and enhancing tumor, respectively. We won the second place of the BraTS 2020 Challenge for the tumor segmentation task.

Fanglan Zheng, Erihe, Kun Li et al.

With the success of big data and artificial intelligence in many fields, the applications of big data driven models are expected in financial risk management especially credit scoring and rating. Under the premise of data privacy protection, we propose a projected gradient-based method in the vertical federated learning framework for the traditional scorecard, which is based on logistic regression with bounded constraints, namely FL-LRBC. The latter enables multiple agencies to jointly train an optimized scorecard model in a single training session. It leads to the formation of the model with positive coefficients, while the time-consuming parameter-tuning process can be avoided. Moreover, the performance in terms of both AUC and the Kolmogorov-Smirnov (KS) statistics is significantly improved due to data enrichment using FL-LRBC. At present, FL-LRBC has already been applied to credit business in a China nation-wide financial holdings group.

Kun Li, Fanglan Zheng, Jiang Tian et al.

In this manuscript, we propose a federated F-score based ensemble tree model for automatic rule extraction, namely Fed-FEARE. Under the premise of data privacy protection, Fed-FEARE enables multiple agencies to jointly extract set of rules both vertically and horizontally. Compared with that without federated learning, measures in evaluating model performance are highly improved. At present, Fed-FEARE has already been applied to multiple business, including anti-fraud and precision marketing, in a China nation-wide financial holdings group.

Yixin Wang, Yao Zhang, Yang Liu et al.

Coronavirus disease 2019 (COVID-19) is a highly contagious virus spreading all around the world. Deep learning has been adopted as an effective technique to aid COVID-19 detection and segmentation from computed tomography (CT) images. The major challenge lies in the inadequate public COVID-19 datasets. Recently, transfer learning has become a widely used technique that leverages the knowledge gained while solving one problem and applying it to a different but related problem. However, it remains unclear whether various non-COVID19 lung lesions could contribute to segmenting COVID-19 infection areas and how to better conduct this transfer procedure. This paper provides a way to understand the transferability of non-COVID19 lung lesions. Based on a publicly available COVID-19 CT dataset and three public non-COVID19 datasets, we evaluate four transfer learning methods using 3D U-Net as a standard encoder-decoder method. The results reveal the benefits of transferring knowledge from non-COVID19 lung lesions, and learning from multiple lung lesion datasets can extract more general features, leading to accurate and robust pre-trained models. We further show the capability of the encoder to learn feature representations of lung lesions, which improves segmentation accuracy and facilitates training convergence. In addition, our proposed Hybrid-encoder learning method incorporates transferred lung lesion features from non-COVID19 datasets effectively and achieves significant improvement. These findings promote new insights into transfer learning for COVID-19 CT image segmentation, which can also be further generalized to other medical tasks.

Nicholas Heller, Fabian Isensee, Klaus H. Maier-Hein et al.

There is a large body of literature linking anatomic and geometric characteristics of kidney tumors to perioperative and oncologic outcomes. Semantic segmentation of these tumors and their host kidneys is a promising tool for quantitatively characterizing these lesions, but its adoption is limited due to the manual effort required to produce high-quality 3D segmentations of these structures. Recently, methods based on deep learning have shown excellent results in automatic 3D segmentation, but they require large datasets for training, and there remains little consensus on which methods perform best. The 2019 Kidney and Kidney Tumor Segmentation challenge (KiTS19) was a competition held in conjunction with the 2019 International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI) which sought to address these issues and stimulate progress on this automatic segmentation problem. A training set of 210 cross sectional CT images with kidney tumors was publicly released with corresponding semantic segmentation masks. 106 teams from five continents used this data to develop automated systems to predict the true segmentation masks on a test set of 90 CT images for which the corresponding ground truth segmentations were kept private. These predictions were scored and ranked according to their average So rensen-Dice coefficient between the kidney and tumor across all 90 cases. The winning team achieved a Dice of 0.974 for kidney and 0.851 for tumor, approaching the inter-annotator performance on kidney (0.983) but falling short on tumor (0.923). This challenge has now entered an "open leaderboard" phase where it serves as a challenging benchmark in 3D semantic segmentation.

Yao Zhang, Yixin Wang, Feng Hou et al.

Automated segmentation of kidney and tumor from 3D CT scans is necessary for the diagnosis, monitoring, and treatment planning of the disease. In this paper, we describe a two-stage framework for kidney and tumor segmentation based on 3D fully convolutional network (FCN). The first stage preliminarily locate the kidney and cut off the irrelevant background to reduce class imbalance and computation cost. Then the second stage precisely segment the kidney and tumor on the cropped patch. The proposed method ranks the 4th place out of 105 competitive teams in MICCAI 2019 KiTS Challenge with a Composite Dice of 90.24%.