Wenxi Zhu

Honglin Zhu, Jiaping Cao, Jiang Shao et al.

Peak breaking Matrix Multiplication is a promising technique to improve the performance of DL, especially in LLM training and inference. We present FalconGEMM, a cross-platform framework that automates the deployment, optimization, and selection of Lower-Complexity Matrix Multiplication Algorithms (LCMAs) across diverse hardware. There are three key innovations: (1) a Deployment Module that enables portable execution across various hardware and input configurations through code generation; (2) an Execution Module with Group-Parallel Optimizations that maximizes on-chip data reuse, utilizes parallel resources, and reduces bandwidth overhead; and (3) a Decision Module featuring a lightweight analytical performance model to select the optimal strategy based on matrix shapes and hardware profiles. Extensive evaluation is conducted on LLM workloads across GPU (H20, A100) and CPU (ARM, x86) architectures with multiple data types. FalconGEMM succeeds in delivering peak breaking performance and outperforms GEMM libraries (e.g., cuBLAS, CUTLASS, Intel MKL, etc) by 7.59%-17.85% and LCMA competitors like AlphaTensor by 12.41%-55.61%. Our framework makes the theoretical promise of LCMAs practical for production deployment across the heterogeneous landscape of modern hardware.

Wenxi Zhu, Wensheng Gan, Zhenlian Qi

Viruses represent the most abundant biological entities on Earth and play a pivotal role in microbial ecosystems, yet, as prominent human pathogens, they are closely linked to human morbidity and mortality. Accurate identification of viral sequences from viral genome sequences is therefore essential, but existing genome-based classification models that largely relying on composition- or frequency-based subsequence features often suffer from limited interpretability and reduced accuracy, particularly on complex or imbalanced datasets. To address these limitations, we propose GeneNSPCla (Genomic Negative Sequential Pattern-based Classification), a novel viral classification framework based on Negative Sequential Patterns (NSPs) that extracts discriminative absence-based features from nucleotide sequences of RNA viral genomes. By transforming these NSPs into numerical feature vectors and integrating them into multiple supervised classifiers, GeneNSPCla effectively captures both presence and absence signals in viral sequences. Furthermore, we propose a negative pattern mining algorithm adapted for processing genomic data: GONPM+, which can discover longer and more biologically meaningful negative sequential patterns. The experimental results demonstrate that the average accuracy of GONPM+ in 8 classifiers has improved by 10.03% compared to the original negative pattern mining algorithm and by 24.75% compared to the positive pattern mining algorithm. These findings highlight the effectiveness of incorporating absence-based sequential information, providing a new and complementary perspective for viral genome analysis and classification.