Madhav Marathe

Oishee Bintey Hoque, Nibir Chandra Mandal, Mandy L Wilson et al.

Concentrated Animal Feeding Operations (CAFOs) play an important role in agricultural production but are also associated with environmental, public health, and disease surveillance concerns. Large-scale mapping of CAFOs from remote sensing imagery remains challenging due to heterogeneous infrastructure layouts, noisy location records, inconsistent annotations, and incomplete inventories. We introduce CAFOSat, a strongly annotated, infrastructure-aware dataset for CAFO mapping across the United States. CAFOSat integrates high-resolution National Agriculture Imagery Program (NAIP) imagery with multi-source CAFO inventories collected across multiple states and transforms weak geolocation records into refined annotations through a human-in-the-loop pipeline combining AI-assisted annotation, GradCAM-based localization, and geometric clustering. To improve dataset quality, we curate challenging negative samples using land-cover-guided sampling with spatial exclusion constraints and provide infrastructure-level annotations, including barns, manure ponds, and grazing-related features, through manual verification. The resulting dataset contains more than 45,000 image patches spanning 20 states and four major CAFO categories. We benchmark a diverse set of convolutional, transformer-based, and vision-language models, demonstrating the value of refined annotations and curated negative samples for CAFO classification and generalization. In addition, we introduce a synthetic augmentation pipeline that generates infrastructure-aware variations to increase training diversity and improve robustness under distribution shifts. CAFOSat provides a large-scale benchmark for advancing infrastructure-aware agricultural monitoring and CAFO mapping from high-resolution remote sensing imagery.

Swapna Thorve, Young Yun Baek, Samarth Swarup et al.

Efficient energy consumption is crucial for achieving sustainable energy goals in the era of climate change and grid modernization. Thus, it is vital to understand how energy is consumed at finer resolutions such as household in order to plan demand-response events or analyze the impacts of weather, electricity prices, electric vehicles, solar, and occupancy schedules on energy consumption. However, availability and access to detailed energy-use data, which would enable detailed studies, has been rare. In this paper, we release a unique, large-scale, synthetic, residential energy-use dataset for the residential sector across the contiguous United States covering millions of households. The data comprise of hourly energy use profiles for synthetic households, disaggregated into Thermostatically Controlled Loads (TCL) and appliance use. The underlying framework is constructed using a bottom-up approach. Diverse open-source surveys and first principles models are used for end-use modeling. Extensive validation of the synthetic dataset has been conducted through comparisons with reported energy-use data. We present a detailed, open, high-resolution, residential energy-use dataset for the United States.

Aniruddha Adiga, Jingyuan Chou, Anshul Chiranth et al.

Epidemic forecasting has become an integral part of real-time infectious disease outbreak response. While collaborative ensembles composed of statistical and machine learning models have become the norm for real-time forecasting, standardized benchmark datasets for evaluating such methods are lacking. Further, there is limited understanding on performance of these methods for novel outbreaks with limited historical data. In this paper, we propose IDOBE, a curated collection of epidemiological time series focused on outbreak forecasting. IDOBE compiles from multiple data repositories spanning over a century of surveillance and across U.S. states and global locations. We perform derivative-based segmentation to generate over 10,000 outbreaks covering multiple outcomes such as cases and hospitalizations for 13 diseases. We consider a variety of information-theoretic and distributional measures to quantify the epidemiological diversity of the dataset. Finally, we perform multi-horizon short-term forecasting (1- to 4-week-ahead) through the progression of the outbreak using 11 baseline models and report on their performance. In addition to standard metrics such as NMSE and MAPE for point forecasts, we include probabilistic scoring rules such as Normalized Weighted Interval Score (NWIS) to quantify the performance. We find that MLP-based methods have the most robust performance, with statistical methods having a slight edge during the pre-peak phase. IDOBE dataset along with baselines are released publicly on https://github.com/NSSAC/IDOBE to enable standardized, reproducible benchmarking of outbreak forecasting methods.

Oishee Bintey Hoque, Nibir Chandra Mandal, Kyle Luong et al.

Large-scale livestock operations pose significant risks to human health and the environment, while also being vulnerable to threats such as infectious diseases and extreme weather events. As the number of such operations continues to grow, accurate and scalable mapping has become increasingly important. In this work, we present an infrastructure-first, explainable pipeline for identifying and characterizing Concentrated Animal Feeding Operations (CAFOs) from aerial and satellite imagery. Our method (i) detects candidate infrastructure (e.g., barns, feedlots, manure lagoons, silos) with a domain-tuned YOLOv8 detector, then derives SAM2 masks from these boxes and filters component-specific criteria; (ii) extracts structured descriptors (e.g., counts, areas, orientations, and spatial relations) and fuses them with deep visual features using a lightweight spatial cross-attention classifier; and (iii) outputs both CAFO type predictions and mask-level attributions that link decisions to visible infrastructure. Through comprehensive evaluation, we show that our approach achieves state-of-the-art performance, with Swin-B+PRISM-CAFO surpassing the best performing baseline by up to 15\%. Beyond strong predictive performance across diverse U.S. regions, we run systematic gradient--activation analyses that quantify the impact of domain priors and show how specific infrastructure (e.g., barns, lagoons) shapes classification decisions. We release code, infrastructure masks, and descriptors to support transparent, scalable monitoring of livestock infrastructure, enabling risk modeling, change detection, and targeted regulatory action. Github: https://github.com/Nibir088/PRISM-CAFO.

Kazi Ashik Islam, Da Qi Chen, Madhav Marathe et al.

Evacuation planning is a crucial part of disaster management. However, joint optimization of its two essential components, routing and scheduling, with objectives such as minimizing average evacuation time or evacuation completion time, is a computationally hard problem. To approach it, we present MIP-LNS, a scalable optimization method that utilizes heuristic search with mathematical optimization and can optimize a variety of objective functions. We also present the method MIP-LNS-SIM, where we combine agent-based simulation with MIP-LNS to estimate delays due to congestion, as well as, find optimized plans considering such delays. We use Harris County in Houston, Texas, as our study area. We show that, within a given time limit, MIP-LNS finds better solutions than existing methods in terms of three different metrics. However, when congestion dependent delay is considered, MIP-LNS-SIM outperforms MIP-LNS in multiple performance metrics. In addition, MIP-LNS-SIM has a significantly lower percent error in estimated evacuation completion time compared to MIP-LNS.

Nibir Chandra Mandal, Oishee Bintey Hoque, Abhijin Adiga et al.

We introduce IrrMap, the first large-scale dataset (1.1 million patches) for irrigation method mapping across regions. IrrMap consists of multi-resolution satellite imagery from LandSat and Sentinel, along with key auxiliary data such as crop type, land use, and vegetation indices. The dataset spans 1,687,899 farms and 14,117,330 acres across multiple western U.S. states from 2013 to 2023, providing a rich and diverse foundation for irrigation analysis and ensuring geospatial alignment and quality control. The dataset is ML-ready, with standardized 224x224 GeoTIFF patches, the multiple input modalities, carefully chosen train-test-split data, and accompanying dataloaders for seamless deep learning model training andbenchmarking in irrigation mapping. The dataset is also accompanied by a complete pipeline for dataset generation, enabling researchers to extend IrrMap to new regions for irrigation data collection or adapt it with minimal effort for other similar applications in agricultural and geospatial analysis. We also analyze the irrigation method distribution across crop groups, spatial irrigation patterns (using Shannon diversity indices), and irrigated area variations for both LandSat and Sentinel, providing insights into regional and resolution-based differences. To promote further exploration, we openly release IrrMap, along with the derived datasets, benchmark models, and pipeline code, through a GitHub repository: https://github.com/Nibir088/IrrMap and Data repository: https://huggingface.co/Nibir/IrrMap, providing comprehensive documentation and implementation details.

Oishee Bintey Hoque, Samarth Swarup, Abhijin Adiga et al.

Irrigation mapping plays a crucial role in effective water management, essential for preserving both water quality and quantity, and is key to mitigating the global issue of water scarcity. The complexity of agricultural fields, adorned with diverse irrigation practices, especially when multiple systems coexist in close quarters, poses a unique challenge. This complexity is further compounded by the nature of Landsat's remote sensing data, where each pixel is rich with densely packed information, complicating the task of accurate irrigation mapping. In this study, we introduce an innovative approach that employs a progressive training method, which strategically increases patch sizes throughout the training process, utilizing datasets from Landsat 5 and 7, labeled with the WRLU dataset for precise labeling. This initial focus allows the model to capture detailed features, progressively shifting to broader, more general features as the patch size enlarges. Remarkably, our method enhances the performance of existing state-of-the-art models by approximately 20%. Furthermore, our analysis delves into the significance of incorporating various spectral bands into the model, assessing their impact on performance. The findings reveal that additional bands are instrumental in enabling the model to discern finer details more effectively. This work sets a new standard for leveraging remote sensing imagery in irrigation mapping.

Oishee Bintey Hoque, Nibir Chandra Mandal, Abhijin Adiga et al.

Accurate mapping of irrigation methods is crucial for sustainable agricultural practices and food systems. However, existing models that rely solely on spectral features from satellite imagery are ineffective due to the complexity of agricultural landscapes and limited training data, making this a challenging problem. We present Knowledge-Informed Irrigation Mapping (KIIM), a novel Swin-Transformer based approach that uses (i) a specialized projection matrix to encode crop to irrigation probability, (ii) a spatial attention map to identify agricultural lands from non-agricultural lands, (iii) bi-directional cross-attention to focus complementary information from different modalities, and (iv) a weighted ensemble for combining predictions from images and crop information. Our experimentation on five states in the US shows up to 22.9\% (IoU) improvement over baseline with a 71.4% (IoU) improvement for hard-to-classify drip irrigation. In addition, we propose a two-phase transfer learning approach to enhance cross-state irrigation mapping, achieving a 51% IoU boost in a state with limited labeled data. The ability to achieve baseline performance with only 40% of the training data highlights its efficiency, reducing the dependency on extensive manual labeling efforts and making large-scale, automated irrigation mapping more feasible and cost-effective.

Kazi Ashik Islam, Zakaria Mehrab, Mahantesh Halappanavar et al.

Coastal flooding poses increasing threats to communities worldwide, necessitating accurate and hyper-local inundation forecasting for effective emergency response. However, real-world deployment of forecasting systems is often constrained by sparse sensor networks, where only a limited subset of locations may have sensors due to budget constraints. To approach this challenge, we present DIFF -SPARSE, a masked conditional diffusion model designed for probabilistic coastal inundation forecasting from sparse sensor observations. DIFF -SPARSE primarily utilizes the inundation history of a location and its neighboring locations from a context time window as spatiotemporal context. The fundamental challenge of spatiotemporal prediction based on sparse observations in the context window is addressed by introducing a novel masking strategy during training. Digital elevation data and temporal co-variates are utilized as additional spatial and temporal contexts, respectively. A convolutional neural network and a conditional UNet architecture with cross-attention mechanism are employed to capture the spatiotemporal dynamics in the data. We trained and tested DIFF -SPARSE on coastal inundation data from the Eastern Shore of Virginia and systematically assessed the performance of DIFF -SPARSE across different sparsity levels 0%, 50%, 95% missing observations. Our experiment results show that DIFF -SPARSE achieves upto 62% improvement in terms of two forecasting performance metrics compared to existing methods, at 95% sparsity level. Moreover, our ablation studies reveal that digital elevation data becomes more useful at high sparsity levels compared to temporal co-variates.

George Li, Ann Li, Madhav Marathe et al.

In response to COVID-19, many countries have mandated social distancing and banned large group gatherings in order to slow down the spread of SARS-CoV-2. These social interventions along with vaccines remain the best way forward to reduce the spread of SARS CoV-2. In order to increase vaccine accessibility, states such as Virginia have deployed mobile vaccination centers to distribute vaccines across the state. When choosing where to place these sites, there are two important factors to take into account: accessibility and equity. We formulate a combinatorial problem that captures these factors and then develop efficient algorithms with theoretical guarantees on both of these aspects. Furthermore, we study the inherent hardness of the problem, and demonstrate strong impossibility results. Finally, we run computational experiments on real-world data to show the efficacy of our methods.

Lijing Wang, Dipanjan Ghosh, Maria Teresa Gonzalez Diaz et al.

Deep learning classifiers are assisting humans in making decisions and hence the user's trust in these models is of paramount importance. Trust is often a function of constant behavior. From an AI model perspective it means given the same input the user would expect the same output, especially for correct outputs, or in other words consistently correct outputs. This paper studies a model behavior in the context of periodic retraining of deployed models where the outputs from successive generations of the models might not agree on the correct labels assigned to the same input. We formally define consistency and correct-consistency of a learning model. We prove that consistency and correct-consistency of an ensemble learner is not less than the average consistency and correct-consistency of individual learners and correct-consistency can be improved with a probability by combining learners with accuracy not less than the average accuracy of ensemble component learners. To validate the theory using three datasets and two state-of-the-art deep learning classifiers we also propose an efficient dynamic snapshot ensemble method and demonstrate its value.

Lijing Wang, Aniruddha Adiga, Srinivasan Venkatramanan et al.

The COVID-19 pandemic represents the most significant public health disaster since the 1918 influenza pandemic. During pandemics such as COVID-19, timely and reliable spatio-temporal forecasting of epidemic dynamics is crucial. Deep learning-based time series models for forecasting have recently gained popularity and have been successfully used for epidemic forecasting. Here we focus on the design and analysis of deep learning-based models for COVID-19 forecasting. We implement multiple recurrent neural network-based deep learning models and combine them using the stacking ensemble technique. In order to incorporate the effects of multiple factors in COVID-19 spread, we consider multiple sources such as COVID-19 confirmed and death case count data and testing data for better predictions. To overcome the sparsity of training data and to address the dynamic correlation of the disease, we propose clustering-based training for high-resolution forecasting. The methods help us to identify the similar trends of certain groups of regions due to various spatio-temporal effects. We examine the proposed method for forecasting weekly COVID-19 new confirmed cases at county-, state-, and country-level. A comprehensive comparison between different time series models in COVID-19 context is conducted and analyzed. The results show that simple deep learning models can achieve comparable or better performance when compared with more complicated models. We are currently integrating our methods as a part of our weekly forecasts that we provide state and federal authorities.

Aniruddha Adiga, Devdatt Dubhashi, Bryan Lewis et al.

COVID-19 pandemic represents an unprecedented global health crisis in the last 100 years. Its economic, social and health impact continues to grow and is likely to end up as one of the worst global disasters since the 1918 pandemic and the World Wars. Mathematical models have played an important role in the ongoing crisis; they have been used to inform public policies and have been instrumental in many of the social distancing measures that were instituted worldwide. In this article we review some of the important mathematical models used to support the ongoing planning and response efforts. These models differ in their use, their mathematical form and their scope.

Lijing Wang, Jiangzhuo Chen, Madhav Marathe

Influenza-like illness (ILI) places a heavy social and economic burden on our society. Traditionally, ILI surveillance data is updated weekly and provided at a spatially coarse resolution. Producing timely and reliable high-resolution spatiotemporal forecasts for ILI is crucial for local preparedness and optimal interventions. We present TDEFSI (Theory Guided Deep Learning Based Epidemic Forecasting with Synthetic Information), an epidemic forecasting framework that integrates the strengths of deep neural networks and high-resolution simulations of epidemic processes over networks. TDEFSI yields accurate high-resolution spatiotemporal forecasts using low-resolution time series data. During the training phase, TDEFSI uses high-resolution simulations of epidemics that explicitly model spatial and social heterogeneity inherent in urban regions as one component of training data. We train a two-branch recurrent neural network model to take both within-season and between-season low-resolution observations as features, and output high-resolution detailed forecasts. The resulting forecasts are not just driven by observed data but also capture the intricate social, demographic and geographic attributes of specific urban regions and mathematical theories of disease propagation over networks. We focus on forecasting the incidence of ILI and evaluate TDEFSI's performance using synthetic and real-world testing datasets at the state and county levels in the USA. The results show that, at the state level, our method achieves comparable/better performance than several state-of-the-art methods. At the county level, TDEFSI outperforms the other methods. The proposed method can be applied to other infectious diseases as well.