LGApr 3
Communication-free Sampling and 4D Hybrid Parallelism for Scalable Mini-batch GNN TrainingCunyang Wei, Siddharth Singh, Aishwarya Sarkar et al.
Graph neural networks (GNNs) are widely used for learning on graph datasets derived from various real-world scenarios. Learning from extremely large graphs requires distributed training, and mini-batching with sampling is a popular approach for parallelizing GNN training. Existing distributed mini-batch approaches have significant performance bottlenecks due to expensive sampling methods and limited scaling when using data parallelism. In this work, we present ScaleGNN, a 4D parallel framework for scalable mini-batch GNN training that combines communication-free distributed sampling, 3D parallel matrix multiplication (PMM), and data parallelism. ScaleGNN introduces a uniform vertex sampling algorithm, enabling each process (GPU device) to construct its local mini-batch, i.e., subgraph partitions without any inter-process communication. 3D PMM enables scaling mini-batch training to much larger GPU counts than vanilla data parallelism with significantly lower communication overheads. We also present additional optimizations to overlap sampling with training, reduce communication overhead by sending data in lower precision, kernel fusion, and communication-computation overlap. We evaluate ScaleGNN on five graph datasets and demonstrate strong scaling up to 2048 GPUs on Perlmutter, 2048 GCDs on Frontier, and 1024 GPUs on Tuolumne. On Perlmutter, ScaleGNN achieves 3.5x end-to-end training speedup over the SOTA baseline on ogbn-products.
LGMay 7, 2025
Plexus: Taming Billion-edge Graphs with 3D Parallel Full-graph GNN TrainingAditya K. Ranjan, Siddharth Singh, Cunyang Wei et al.
Graph neural networks (GNNs) leverage the connectivity and structure of real-world graphs to learn intricate properties and relationships between nodes. Many real-world graphs exceed the memory capacity of a GPU due to their sheer size, and training GNNs on such graphs requires techniques such as mini-batch sampling to scale. The alternative approach of distributed full-graph training suffers from high communication overheads and load imbalance due to the irregular structure of graphs. We propose a three-dimensional (3D) parallel approach for full-graph training that tackles these issues and scales to billion-edge graphs. In addition, we introduce optimizations such as a double permutation scheme for load balancing, and a performance model to predict the optimal 3D configuration of our parallel implementation -- Plexus. We evaluate Plexus on six different graph datasets and show scaling results on up to 2048 GPUs of Perlmutter, and 1024 GPUs of Frontier. Plexus achieves unprecedented speedups of 2.3-12.5x over prior state of the art, and a reduction in time-to-solution by 5.2-8.7x on Perlmutter and 7.0-54.2x on Frontier.
LGMay 22, 2023
A 4D Hybrid Algorithm to Scale Parallel Training to Thousands of GPUsSiddharth Singh, Prajwal Singhania, Aditya K. Ranjan et al.
Heavy communication, in particular, collective operations, can become a critical performance bottleneck in scaling the training of billion-parameter neural networks to large-scale parallel systems. This paper introduces a four-dimensional (4D) approach to optimize communication in parallel training. This 4D approach is a hybrid of 3D tensor and data parallelism, and is implemented in the AxoNN framework. In addition, we employ two key strategies to further minimize communication overheads. First, we aggressively overlap expensive collective operations (reduce-scatter, all-gather, and all-reduce) with computation. Second, we develop an analytical model to identify high-performing configurations within the large search space defined by our 4D algorithm. This model empowers practitioners by simplifying the tuning process for their specific training workloads. When training an 80-billion parameter GPT on 1024 GPUs of Perlmutter, AxoNN surpasses Megatron-LM, a state-of-the-art framework, by a significant 26%. Additionally, it achieves a significantly high 57% of the theoretical peak FLOP/s or 182 PFLOP/s in total.