Yves Coudière

2papers

2 Papers

NAApr 26, 2018
Exponential Adams Bashforth integrators for stiff ODEs, application to cardiac electrophysiology

Yves Coudière, Charlie Douanla Lontsi, Charles Pierre

Models in cardiac electrophysiology are coupled systems of reaction diffusion PDE and of ODE. The ODE system displays a very stiff behavior. It is non linear and its upgrade at each time step is a preponderant load in the computational cost. The issue is to develop high order explicit and stable methods to cope with this situation.In this article, is is analyzed the resort to exponential Adams Bashforth (EAB) integrators in cardiac electrophysiology. The method is presented in the framework of a general and varying stabilizer, that is well suited in this context. Stability under perturbation (or 0-stability) is proven. It provides a new approach for the convergence analysis of the method. The Dahlquist stability properties of the method is performed. It is presented in a new framework that incorporates the discrepancy between the stabilizer and the system Jacobian matrix. Provided this discrepancy is small enough, the method is shown to be A(alpha)-stable. This result is interesting for an explicit time-stepping method. Numerical experiments are presented for two classes of stiff models in cardiac electrophysiology. They include performances comparisons with several classical methods. The EAB method is observed to be as stable as implicit solvers and cheaper at equal level of accuracy.

NAJan 8, 2018
Efficient high order schemes for stiff ODEs in cardiac electrophysiology

Charlie Douanla Lontsi, Yves Coudière, Charles Pierre

In this work we analyze the resort to high order exponential solvers for stiff ODEs in the context of cardiac electrophysiology modeling. The exponential Adams-Bashforth and the Rush-Larsen schemes will be considered up to order 4. These methods are explicit multistep schemes.The accuracy and the cost of these methods are numerically analyzed in this paper and benchmarked with several classical explicit and implicit schemes at various orders. This analysis has been led considering data of high particular interest in cardiac electrophysiology : the activation time ($t\_a$ ), the recovery time ($t\_r $) and the action potential duration ($APD$). The Beeler Reuter ionic model, especially designed for cardiac ventricular cells, has been used for this study. It is shown that, in spite of the stiffness of the considered model, exponential solvers allow computation at large time steps, as large as for implicit methods. Moreover, in terms of cost for a given accuracy, a significant gain is achieved with exponential solvers. We conclude that accurate computations at large time step are possible with explicit high order methods. This is a quite important feature when considering stiff non linear ODEs.