Alberto García-Durán

Alberto García-Durán, Akhil Arora, Robert West

Candidate generation is a crucial module in entity linking. It also plays a key role in multiple NLP tasks that have been proven to beneficially leverage knowledge bases. Nevertheless, it has often been overlooked in the monolingual English entity linking literature, as naive approaches obtain very good performance. Unfortunately, the existing approaches for English cannot be successfully transferred to poorly resourced languages. This paper constitutes an in-depth analysis of the candidate generation problem in the context of cross-lingual entity linking with a focus on low-resource languages. Among other contributions, we point out limitations in the evaluation conducted in previous works. We introduce a characterization of queries into types based on their difficulty, which improves the interpretability of the performance of different methods. We also propose a light-weight and simple solution based on the construction of indexes whose design is motivated by more complex transfer learning based neural approaches. A thorough empirical analysis on 9 real-world datasets under 2 evaluation settings shows that our simple solution outperforms the state-of-the-art approach in terms of both quality and efficiency for almost all datasets and query types.

Akhil Arora, Alberto García-Durán, Robert West

Entity linking is an important problem with many applications. Most previous solutions were designed for settings where annotated training data is available, which is, however, not the case in numerous domains. We propose a light-weight and scalable entity linking method, Eigenthemes, that relies solely on the availability of entity names and a referent knowledge base. Eigenthemes exploits the fact that the entities that are truly mentioned in a document (the "gold entities") tend to form a semantically dense subset of the set of all candidate entities in the document. Geometrically speaking, when representing entities as vectors via some given embedding, the gold entities tend to lie in a low-rank subspace of the full embedding space. Eigenthemes identifies this subspace using the singular value decomposition and scores candidate entities according to their proximity to the subspace. On the empirical front, we introduce multiple strong baselines that compare favorably to (and sometimes even outperform) the existing state of the art. Extensive experiments on benchmark datasets from a variety of real-world domains showcase the effectiveness of our approach.

Alberto García-Durán, Robert West

Time series with missing data are signals encountered in important settings for machine learning. Some of the most successful prior approaches for modeling such time series are based on recurrent neural networks that transform the input and previous state to account for the missing observations, and then treat the transformed signal in a standard manner. In this paper, we introduce a single unifying framework, Recursive Input and State Estimation (RISE), for this general approach and reformulate existing models as specific instances of this framework. We then explore additional novel variations within the RISE framework to improve the performance of any instance. We exploit representation learning techniques to learn latent representations of the signals used by RISE instances. We discuss and develop various encoding techniques to learn latent signal representations. We benchmark instances of the framework with various encoding functions on three data imputation datasets, observing that RISE instances always benefit from encoders that learn representations for numerical values from the digits into which they can be decomposed.

Eda Bayram, Alberto Garcia-Duran, Robert West

The existing literature on knowledge graph completion mostly focuses on the link prediction task. However, knowledge graphs have an additional incompleteness problem: their nodes possess numerical attributes, whose values are often missing. Our approach, denoted as MrAP, imputes the values of missing attributes by propagating information across the multi-relational structure of a knowledge graph. It employs regression functions for predicting one node attribute from another depending on the relationship between the nodes and the type of the attributes. The propagation mechanism operates iteratively in a message passing scheme that collects the predictions at every iteration and updates the value of the node attributes. Experiments over two benchmark datasets show the effectiveness of our approach.

Ye Liu, Hui Li, Alberto Garcia-Duran et al.

We present MMKG, a collection of three knowledge graphs that contain both numerical features and (links to) images for all entities as well as entity alignments between pairs of KGs. Therefore, multi-relational link prediction and entity matching communities can benefit from this resource. We believe this data set has the potential to facilitate the development of novel multi-modal learning approaches for knowledge graphs.We validate the utility ofMMKG in the sameAs link prediction task with an extensive set of experiments. These experiments show that the task at hand benefits from learning of multiple feature types.

Brandon Malone, Alberto Garcia-Duran, Mathias Niepert

Extracting actionable insight from Electronic Health Records (EHRs) poses several challenges for traditional machine learning approaches. Patients are often missing data relative to each other; the data comes in a variety of modalities, such as multivariate time series, free text, and categorical demographic information; important relationships among patients can be difficult to detect; and many others. In this work, we propose a novel approach to address these first three challenges using a representation learning scheme based on message passing. We show that our proposed approach is competitive with or outperforms the state of the art for predicting in-hospital mortality (binary classification), the length of hospital visits (regression) and the discharge destination (multiclass classification).

Brandon Malone, Alberto García-Durán, Mathias Niepert

The polypharmacy side effect prediction problem considers cases in which two drugs taken individually do not result in a particular side effect; however, when the two drugs are taken in combination, the side effect manifests. In this work, we demonstrate that multi-relational knowledge graph completion achieves state-of-the-art results on the polypharmacy side effect prediction problem. Empirical results show that our approach is particularly effective when the protein targets of the drugs are well-characterized. In contrast to prior work, our approach provides more interpretable predictions and hypotheses for wet lab validation.

Alberto García-Durán, Sebastijan Dumančić, Mathias Niepert

Research on link prediction in knowledge graphs has mainly focused on static multi-relational data. In this work we consider temporal knowledge graphs where relations between entities may only hold for a time interval or a specific point in time. In line with previous work on static knowledge graphs, we propose to address this problem by learning latent entity and relation type representations. To incorporate temporal information, we utilize recurrent neural networks to learn time-aware representations of relation types which can be used in conjunction with existing latent factorization methods. The proposed approach is shown to be robust to common challenges in real-world KGs: the sparsity and heterogeneity of temporal expressions. Experiments show the benefits of our approach on four temporal KGs. The data sets are available under a permissive BSD-3 license 1.

Sebastijan Dumancic, Alberto Garcia-Duran, Mathias Niepert

Many real-world domains can be expressed as graphs and, more generally, as multi-relational knowledge graphs. Though reasoning and learning with knowledge graphs has traditionally been addressed by symbolic approaches, recent methods in (deep) representation learning has shown promising results for specialized tasks such as knowledge base completion. These approaches abandon the traditional symbolic paradigm by replacing symbols with vectors in Euclidean space. With few exceptions, symbolic and distributional approaches are explored in different communities and little is known about their respective strengths and weaknesses. In this work, we compare representation learning and relational learning on various relational classification and clustering tasks and analyse the complexity of the rules used implicitly by these approaches. Preliminary results reveal possible indicators that could help in choosing one approach over the other for particular knowledge graphs.

Mathias Niepert, Alberto Garcia-Duran

We present our ongoing work on understanding the limitations of graph convolutional networks (GCNs) as well as our work on generalizations of graph convolutions for representing more complex node attribute dependencies. Based on an analysis of GCNs with the help of the corresponding computation graphs, we propose a generalization of existing GCNs where the aggregation operations are (a) determined by structural properties of the local neighborhood graphs and (b) not restricted to weighted averages. We show that the proposed approach is strictly more expressive while requiring only a modest increase in the number of parameters and computations. We also show that the proposed generalization is identical to standard convolutional layers when applied to regular grid graphs.

Alberto Garcia-Duran, Roberto Gonzalez, Daniel Onoro-Rubio et al.

The text of a review expresses the sentiment a customer has towards a particular product. This is exploited in sentiment analysis where machine learning models are used to predict the review score from the text of the review. Furthermore, the products costumers have purchased in the past are indicative of the products they will purchase in the future. This is what recommender systems exploit by learning models from purchase information to predict the items a customer might be interested in. We propose TransRev, an approach to the product recommendation problem that integrates ideas from recommender systems, sentiment analysis, and multi-relational learning into a joint learning objective. TransRev learns vector representations for users, items, and reviews. The embedding of a review is learned such that (a) it performs well as input feature of a regression model for sentiment prediction; and (b) it always translates the reviewer embedding to the embedding of the reviewed items. This allows TransRev to approximate a review embedding at test time as the difference of the embedding of each item and the user embedding. The approximated review embedding is then used with the regression model to predict the review score for each item. TransRev outperforms state of the art recommender systems on a large number of benchmark data sets. Moreover, it is able to retrieve, for each user and item, the review text from the training set whose embedding is most similar to the approximated review embedding.

Alberto Garcia-Duran, Mathias Niepert

We propose Embedding Propagation (EP), an unsupervised learning framework for graph-structured data. EP learns vector representations of graphs by passing two types of messages between neighboring nodes. Forward messages consist of label representations such as representations of words and other attributes associated with the nodes. Backward messages consist of gradients that result from aggregating the label representations and applying a reconstruction loss. Node representations are finally computed from the representation of their labels. With significantly fewer parameters and hyperparameters an instance of EP is competitive with and often outperforms state of the art unsupervised and semi-supervised learning methods on a range of benchmark data sets.

Alberto Garcia-Duran, Mathias Niepert

We present KBLRN, a framework for end-to-end learning of knowledge base representations from latent, relational, and numerical features. KBLRN integrates feature types with a novel combination of neural representation learning and probabilistic product of experts models. To the best of our knowledge, KBLRN is the first approach that learns representations of knowledge bases by integrating latent, relational, and numerical features. We show that instances of KBLRN outperform existing methods on a range of knowledge base completion tasks. We contribute a novel data sets enriching commonly used knowledge base completion benchmarks with numerical features. The data sets are available under a permissive BSD-3 license. We also investigate the impact numerical features have on the KB completion performance of KBLRN.

Daniel Oñoro-Rubio, Mathias Niepert, Alberto García-Durán et al.

A visual-relational knowledge graph (KG) is a multi-relational graph whose entities are associated with images. We explore novel machine learning approaches for answering visual-relational queries in web-extracted knowledge graphs. To this end, we have created ImageGraph, a KG with 1,330 relation types, 14,870 entities, and 829,931 images crawled from the web. With visual-relational KGs such as ImageGraph one can introduce novel probabilistic query types in which images are treated as first-class citizens. Both the prediction of relations between unseen images as well as multi-relational image retrieval can be expressed with specific families of visual-relational queries. We introduce novel combinations of convolutional networks and knowledge graph embedding methods to answer such queries. We also explore a zero-shot learning scenario where an image of an entirely new entity is linked with multiple relations to entities of an existing KG. The resulting multi-relational grounding of unseen entity images into a knowledge graph serves as a semantic entity representation. We conduct experiments to demonstrate that the proposed methods can answer these visual-relational queries efficiently and accurately.

Roberto Gonzalez, Filipe Manco, Alberto Garcia-Duran et al.

We present Net2Vec, a flexible high-performance platform that allows the execution of deep learning algorithms in the communication network. Net2Vec is able to capture data from the network at more than 60Gbps, transform it into meaningful tuples and apply predictions over the tuples in real time. This platform can be used for different purposes ranging from traffic classification to network performance analysis. Finally, we showcase the use of Net2Vec by implementing and testing a solution able to profile network users at line rate using traces coming from a real network. We show that the use of deep learning for this case outperforms the baseline method both in terms of accuracy and performance.

Iulian Vlad Serban, Alberto García-Durán, Caglar Gulcehre et al.

Over the past decade, large-scale supervised learning corpora have enabled machine learning researchers to make substantial advances. However, to this date, there are no large-scale question-answer corpora available. In this paper we present the 30M Factoid Question-Answer Corpus, an enormous question answer pair corpus produced by applying a novel neural network architecture on the knowledge base Freebase to transduce facts into natural language questions. The produced question answer pairs are evaluated both by human evaluators and using automatic evaluation metrics, including well-established machine translation and sentence similarity metrics. Across all evaluation criteria the question-generation model outperforms the competing template-based baseline. Furthermore, when presented to human evaluators, the generated questions appear comparable in quality to real human-generated questions.

Alberto Garcia-Duran, Antoine Bordes, Nicolas Usunier et al.

This paper tackles the problem of endogenous link prediction for Knowledge Base completion. Knowledge Bases can be represented as directed graphs whose nodes correspond to entities and edges to relationships. Previous attempts either consist of powerful systems with high capacity to model complex connectivity patterns, which unfortunately usually end up overfitting on rare relationships, or in approaches that trade capacity for simplicity in order to fairly model all relationships, frequent or not. In this paper, we propose Tatec a happy medium obtained by complementing a high-capacity model with a simpler one, both pre-trained separately and then combined. We present several variants of this model with different kinds of regularization and combination strategies and show that this approach outperforms existing methods on different types of relationships by achieving state-of-the-art results on four benchmarks of the literature.

Antoine Bordes, Nicolas Usunier, Alberto Garcia-Duran et al.

We consider the problem of embedding entities and relations of knowledge bases in low-dimensional vector spaces. Unlike most existing approaches, which are primarily efficient for modeling equivalence relations, our approach is designed to explicitly model irreflexive relations, such as hierarchies, by interpreting them as translations operating on the low-dimensional embeddings of the entities. Preliminary experiments show that, despite its simplicity and a smaller number of parameters than previous approaches, our approach achieves state-of-the-art performance according to standard evaluation protocols on data from WordNet and Freebase.