B. S. Manjunath

Jiaxiang Jiang, Amil Khan, S. Shailja et al.

This paper presents a method for time-lapse 3D cell analysis. Specifically, we consider the problem of accurately localizing and quantitatively analyzing sub-cellular features, and for tracking individual cells from time-lapse 3D confocal cell image stacks. The heterogeneity of cells and the volume of multi-dimensional images presents a major challenge for fully automated analysis of morphogenesis and development of cells. This paper is motivated by the pavement cell growth process, and building a quantitative morphogenesis model. We propose a deep feature based segmentation method to accurately detect and label each cell region. An adjacency graph based method is used to extract sub-cellular features of the segmented cells. Finally, the robust graph based tracking algorithm using multiple cell features is proposed for associating cells at different time instances. Extensive experiment results are provided and demonstrate the robustness of the proposed method. The code is available on Github and the method is available as a service through the BisQue portal.

Tajuddin Manhar Mohammed, Lakshmanan Nataraj, Satish Chikkagoudar et al.

The number of malware is constantly on the rise. Though most new malware are modifications of existing ones, their sheer number is quite overwhelming. In this paper, we present a novel system to visualize and map millions of malware to points in a 2-dimensional (2D) spatial grid. This enables visualizing relationships within large malware datasets that can be used to develop triage solutions to screen different malware rapidly and provide situational awareness. Our approach links two visualizations within an interactive display. Our first view is a spatial point-based visualization of similarity among the samples based on a reduced dimensional projection of binary feature representations of malware. Our second spatial grid-based view provides a better insight into similarities and differences between selected malware samples in terms of the binary-based visual representations they share. We also provide a case study where the effect of packing on the malware data is correlated with the complexity of the packing algorithm.

A S M Iftekhar, Raphael Ruschel, Satish Kumar et al.

Scene-graph generation involves creating a structural representation of the relationships between objects in a scene by predicting subject-object-relation triplets from input data. Existing methods show poor performance in detecting triplets outside of a predefined set, primarily due to their reliance on dependent feature learning. To address this issue, we propose DDS -- a decoupled dynamic scene-graph generation network -- that consists of two independent branches that can disentangle extracted features. The key innovation of the current paper is the decoupling of the features representing the relationships from those of the objects, which enables the detection of novel object-relationship combinations. The DDS model is evaluated on three datasets and outperforms previous methods by a significant margin, especially in detecting previously unseen triplets.

R. Austin McEver, Bowen Zhang, B. S. Manjunath

The quality and size of training sets often limit the performance of many state of the art object detectors. However, in many scenarios, it can be difficult to collect images for training, not to mention the costs associated with collecting annotations suitable for training these object detectors. For these reasons, on challenging video datasets such as the Dataset for Underwater Substrate and Invertebrate Analysis (DUSIA), budgets may only allow for collecting and providing partial annotations. To aid in the challenges associated with training with limited and partial annotations, we introduce Context Matched Collages, which leverage explicit context labels to combine unused background examples with existing annotated data to synthesize additional training samples that ultimately improve object detection performance. By combining a set of our generated collage images with the original training set, we see improved performance using three different object detectors on DUSIA, ultimately achieving state of the art object detection performance on the dataset.

Raphael Ruschel, A. S. M. Iftekhar, B. S. Manjunath et al.

The increasing complexity of modern deep neural network models and the expanding sizes of datasets necessitate the development of optimized and scalable training methods. In this white paper, we addressed the challenge of efficiently training neural network models using sequences of varying sizes. To address this challenge, we propose a novel training scheme that enables efficient distributed data-parallel training on sequences of different sizes with minimal overhead. By using this scheme we were able to reduce the padding amount by more than 100$x$ while not deleting a single frame, resulting in an overall increased performance on both training time and Recall in our experiments.