Wei Xie

Wei Xie, Haobo Jiang, Shuo Gu et al.

Robust obstacle avoidance is one of the critical steps for successful goal-driven indoor navigation tasks.Due to the obstacle missing in the visual image and the possible missed detection issue, visual image-based obstacle avoidance techniques still suffer from unsatisfactory robustness. To mitigate it, in this paper, we propose a novel implicit obstacle map-driven indoor navigation framework for robust obstacle avoidance, where an implicit obstacle map is learned based on the historical trial-and-error experience rather than the visual image. In order to further improve the navigation efficiency, a non-local target memory aggregation module is designed to leverage a non-local network to model the intrinsic relationship between the target semantic and the target orientation clues during the navigation process so as to mine the most target-correlated object clues for the navigation decision. Extensive experimental results on AI2-Thor and RoboTHOR benchmarks verify the excellent obstacle avoidance and navigation efficiency of our proposed method. The core source code is available at https://github.com/xwaiyy123/object-navigation.

Binghui Zuo, Zimeng Zhao, Wenqian Sun et al.

Reconstructing interacting hands from monocular images is indispensable in AR/VR applications. Most existing solutions rely on the accurate localization of each skeleton joint. However, these methods tend to be unreliable due to the severe occlusion and confusing similarity among adjacent hand parts. This also defies human perception because humans can quickly imitate an interaction pattern without localizing all joints. Our key idea is to first construct a two-hand interaction prior and recast the interaction reconstruction task as the conditional sampling from the prior. To expand more interaction states, a large-scale multimodal dataset with physical plausibility is proposed. Then a VAE is trained to further condense these interaction patterns as latent codes in a prior distribution. When looking for image cues that contribute to interaction prior sampling, we propose the interaction adjacency heatmap (IAH). Compared with a joint-wise heatmap for localization, IAH assigns denser visible features to those invisible joints. Compared with an all-in-one visible heatmap, it provides more fine-grained local interaction information in each interaction region. Finally, the correlations between the extracted features and corresponding interaction codes are linked by the ViT module. Comprehensive evaluations on benchmark datasets have verified the effectiveness of this framework. The code and dataset are publicly available at https://github.com/binghui-z/InterPrior_pytorch

Zhenhua Wang, Wei Xie, Kai Chen et al.

Large language models (LLMs), such as ChatGPT, have emerged with astonishing capabilities approaching artificial general intelligence. While providing convenience for various societal needs, LLMs have also lowered the cost of generating harmful content. Consequently, LLM developers have deployed semantic-level defenses to recognize and reject prompts that may lead to inappropriate content. Unfortunately, these defenses are not foolproof, and some attackers have crafted "jailbreak" prompts that temporarily hypnotize the LLM into forgetting content defense rules and answering any improper questions. To date, there is no clear explanation of the principles behind these semantic-level attacks and defenses in both industry and academia. This paper investigates the LLM jailbreak problem and proposes an automatic jailbreak method for the first time. We propose the concept of a semantic firewall and provide three technical implementation approaches. Inspired by the attack that penetrates traditional firewalls through reverse tunnels, we introduce a "self-deception" attack that can bypass the semantic firewall by inducing LLM to generate prompts that facilitate jailbreak. We generated a total of 2,520 attack payloads in six languages (English, Russian, French, Spanish, Chinese, and Arabic) across seven virtual scenarios, targeting the three most common types of violations: violence, hate, and pornography. The experiment was conducted on two models, namely the GPT-3.5-Turbo and GPT-4. The success rates on the two models were 86.2% and 67%, while the failure rates were 4.7% and 2.2%, respectively. This highlighted the effectiveness of the proposed attack method. All experimental code and raw data will be released as open-source to inspire future research. We believe that manipulating AI behavior through carefully crafted prompts will become an important research direction in the future.

Zhigang Tu, Hongyan Li, Wei Xie et al.

Video super-resolution is currently one of the most active research topics in computer vision as it plays an important role in many visual applications. Generally, video super-resolution contains a significant component, i.e., motion compensation, which is used to estimate the displacement between successive video frames for temporal alignment. Optical flow, which can supply dense and sub-pixel motion between consecutive frames, is among the most common ways for this task. To obtain a good understanding of the effect that optical flow acts in video super-resolution, in this work, we conduct a comprehensive review on this subject for the first time. This investigation covers the following major topics: the function of super-resolution (i.e., why we require super-resolution); the concept of video super-resolution (i.e., what is video super-resolution); the description of evaluation metrics (i.e., how (video) superresolution performs); the introduction of optical flow based video super-resolution; the investigation of using optical flow to capture temporal dependency for video super-resolution. Prominently, we give an in-depth study of the deep learning based video super-resolution method, where some representative algorithms are analyzed and compared. Additionally, we highlight some promising research directions and open issues that should be further addressed.

Panyu Jiao, Shuizhou Chen, Yiheng Shen et al.

Message-passing neural networks (MPNNs) are widely used for molecular property prediction, but their deployment as monolithic architectures makes it difficult to identify how specific message-passing operators affect performance. We present an operator-level factorial benchmark that decomposes 2D molecular MPNNs into the three families of message-seed initialization, node-edge fusion, and node update operators. The resulting 84 configurations are benchmarked on ten MoleculeNet datasets under a shared experimental setup and statistical analysis protocol. Across this controlled design, performance variation is associated primarily with message construction rather than update complexity. Message-seed initialization shows significant family-level effects for both regression and classification, node-edge fusion shows a significant family-level effect for regression with descriptive advantages for concatenation-based mixing, and the update family shows no statistically supported effect for either endpoint family. A representation probe into the Quinethazone molecule further demonstrates that concatenation-based mixing can better differentiate chemically distinct heteroatoms and withstand oversmoothing than Hadamard gating. Representative configurations selected separately for classification and regression recover competitive performance relative to established molecular graph neural network (GNN) baselines, ranking numerically best on eight of ten benchmark datasets. These empirical results are interpreted through concise mechanistic analyses of representative node-edge fusion and update operators. Our findings provide empirical design heuristics for molecular MPNNs by turning model design from a search over monolithic architectures into a targeted assessment of where and how chemical information enters the message-passing pipeline.

Zimeng Zhao, Binghui Zuo, Wei Xie et al.

Physical contact provides additional constraints for hand-object state reconstruction as well as a basis for further understanding of interaction affordances. Estimating these severely occluded regions from monocular images presents a considerable challenge. Existing methods optimize the hand-object contact driven by distance threshold or prior from contact-labeled datasets. However, due to the number of subjects and objects involved in these indoor datasets being limited, the learned contact patterns could not be generalized easily. Our key idea is to reconstruct the contact pattern directly from monocular images, and then utilize the physical stability criterion in the simulation to optimize it. This criterion is defined by the resultant forces and contact distribution computed by the physics engine.Compared to existing solutions, our framework can be adapted to more personalized hands and diverse object shapes. Furthermore, an interaction dataset with extra physical attributes is created to verify the sim-to-real consistency of our methods. Through comprehensive evaluations, hand-object contact can be reconstructed with both accuracy and stability by the proposed framework.

Hao Sun, Mingyao Zhou, Wenjing Chen et al.

Video moment retrieval (MR) and highlight detection (HD) based on natural language queries are two highly related tasks, which aim to obtain relevant moments within videos and highlight scores of each video clip. Recently, several methods have been devoted to building DETR-based networks to solve both MR and HD jointly. These methods simply add two separate task heads after multi-modal feature extraction and feature interaction, achieving good performance. Nevertheless, these approaches underutilize the reciprocal relationship between two tasks. In this paper, we propose a task-reciprocal transformer based on DETR (TR-DETR) that focuses on exploring the inherent reciprocity between MR and HD. Specifically, a local-global multi-modal alignment module is first built to align features from diverse modalities into a shared latent space. Subsequently, a visual feature refinement is designed to eliminate query-irrelevant information from visual features for modal interaction. Finally, a task cooperation module is constructed to refine the retrieval pipeline and the highlight score prediction process by utilizing the reciprocity between MR and HD. Comprehensive experiments on QVHighlights, Charades-STA and TVSum datasets demonstrate that TR-DETR outperforms existing state-of-the-art methods. Codes are available at \url{https://github.com/mingyao1120/TR-DETR}.

Wei Xie, Zhipeng Yu, Zimeng Zhao et al.

We construct the first markerless deformable interaction dataset recording interactive motions of the hands and deformable objects, called HMDO (Hand Manipulation with Deformable Objects). With our built multi-view capture system, it captures the deformable interactions with multiple perspectives, various object shapes, and diverse interactive forms. Our motivation is the current lack of hand and deformable object interaction datasets, as 3D hand and deformable object reconstruction is challenging. Mainly due to mutual occlusion, the interaction area is difficult to observe, the visual features between the hand and the object are entangled, and the reconstruction of the interaction area deformation is difficult. To tackle this challenge, we propose a method to annotate our captured data. Our key idea is to collaborate with estimated hand features to guide the object global pose estimation, and then optimize the deformation process of the object by analyzing the relationship between the hand and the object. Through comprehensive evaluation, the proposed method can reconstruct interactive motions of hands and deformable objects with high quality. HMDO currently consists of 21600 frames over 12 sequences. In the future, this dataset could boost the research of learning-based reconstruction of deformable interaction scenes.

Guanhui Ye, Jiashi Gao, Wei Xie et al.

Image watermarking is a technique for hiding information into images that can withstand distortions while requiring the encoded image to be perceptually identical to the original image. Recent work based on deep neural networks (DNN) has achieved impressive progression in digital watermarking. Higher robustness under various distortions is the eternal pursuit of digital image watermarking approaches. In this paper, we propose DBMARK, a novel end-to-end digital image watermarking framework to deep boost the robustness of DNN-based image watermarking. The key novelty is the synergy of invertible neural networks (INN) and effective watermark features generation. The framework generates watermark features with redundancy and error correction ability through the effective neural network based message processor, synergized with the powerful information embedding and extraction abilities of INN to achieve higher robustness and invisibility. The powerful learning ability of neural networks enables the message processor to adapt to various distortions. In addition, we propose to embed the watermark information in the discrete wavelet transform (DWT) domain and design low-low (LL) sub-band loss to enhance invisibility. Extensive experiment results demonstrate the superiority of the proposed framework compared with the state-of-the-art ones under various distortions such as dropout, cropout, crop, Gaussian filter, and JPEG compression.

Wei Xie, Zimeng Zhao, Shiying Li et al.

Acquiring contact patterns between hands and nonrigid objects is a common concern in the vision and robotics community. However, existing learning-based methods focus more on contact with rigid ones from monocular images. When adopting them for nonrigid contact, a major problem is that the existing contact representation is restricted by the geometry of the object. Consequently, contact neighborhoods are stored in an unordered manner and contact features are difficult to align with image cues. At the core of our approach lies a novel hand-object contact representation called RUPs (Region Unwrapping Profiles), which unwrap the roughly estimated hand-object surfaces as multiple high-resolution 2D regional profiles. The region grouping strategy is consistent with the hand kinematic bone division because they are the primitive initiators for a composite contact pattern. Based on this representation, our Regional Unwrapping Transformer (RUFormer) learns the correlation priors across regions from monocular inputs and predicts corresponding contact and deformed transformations. Our experiments demonstrate that the proposed framework can robustly estimate the deformed degrees and deformed transformations, which makes it suitable for both nonrigid and rigid contact.

Wei Xie, Keqi Wang, Hua Zheng et al.

Driven by the critical needs of biomanufacturing 4.0, we introduce a probabilistic knowledge graph hybrid model characterizing the risk- and science-based understanding of bioprocess mechanisms. It can faithfully capture the important properties, including nonlinear reactions, partially observed state, and nonstationary dynamics. Given very limited real process observations, we derive a posterior distribution quantifying model estimation uncertainty. To avoid the evaluation of intractable likelihoods, Approximate Bayesian Computation sampling with Sequential Monte Carlo (ABC-SMC) is utilized to approximate the posterior distribution. Under high stochastic and model uncertainties, it is computationally expensive to match output trajectories. Therefore, we create a linear Gaussian dynamic Bayesian network (LG-DBN) auxiliary likelihood-based ABC-SMC approach. Through matching the summary statistics driven through LG-DBN likelihood that can capture critical interactions and variations, the proposed algorithm can accelerate hybrid model inference, support process monitoring, and facilitate mechanism learning and robust control.

Lei Sheng, Shuai-Shuai Xu, Wei Xie

The conversion of natural language into SQL language for querying databases (Text-to-SQL) has broad application prospects and has attracted widespread attention. At present, the mainstream Text-to-SQL methods are mainly divided into in-context learning (ICL) based methods and supervised fine-tuning (SFT) based methods. ICL-based methods can achieve relatively good results thanks to the use of the most advanced closed-source models. However, in real-world application scenarios, factors such as data privacy, SQL generation efficiency and cost need to be considered. SFT-based methods have certain advantages. At present, methods based on fine-tuning of open source models lack easy-to-implement and effective (cost-effective) baseline methods. We propose a pipeline-based method using open source model fine-tuning, referred to as BASE-SQL, which includes four components: Schema Linking, Candidate SQL Generate, SQL Revision and SQL Merge Revision. Experimental results show that BASE-SQL uses the open source model Qwen2.5-Coder-32B-Instruct, and achieves an accuracy of 67.47% on the BIRD development set and 88.9% on the Spider test set, which is significantly better than other methods using open source models, and even exceeds several methods using the GPT-4o closed-source model. At the same time, BASE-SQL is easy to implement and highly efficient (on average, only five calls to the large language model are required to generate SQL once). The code will be open sourced at https://github.com/CycloneBoy/base_sql.

Lin Guo, Xiaoqing Luo, Wei Xie et al.

Existing infrared and visible image fusion methods often face the dilemma of balancing modal information. Generative fusion methods reconstruct fused images by learning from data distributions, but their generative capabilities remain limited. Moreover, the lack of interpretability in modal information selection further affects the reliability and consistency of fusion results in complex scenarios. This manuscript revisits the essence of generative image fusion under the inspiration of human cognitive laws and proposes a novel infrared and visible image fusion method, termed HCLFuse. First, HCLFuse investigates the quantification theory of information mapping in unsupervised fusion networks, which leads to the design of a multi-scale mask-regulated variational bottleneck encoder. This encoder applies posterior probability modeling and information decomposition to extract accurate and concise low-level modal information, thereby supporting the generation of high-fidelity structural details. Furthermore, the probabilistic generative capability of the diffusion model is integrated with physical laws, forming a time-varying physical guidance mechanism that adaptively regulates the generation process at different stages, thereby enhancing the ability of the model to perceive the intrinsic structure of data and reducing dependence on data quality. Experimental results show that the proposed method achieves state-of-the-art fusion performance in qualitative and quantitative evaluations across multiple datasets and significantly improves semantic segmentation metrics. This fully demonstrates the advantages of this generative image fusion method, drawing inspiration from human cognition, in enhancing structural consistency and detail quality.

Jun Wu, Jicun Li, Jiaqi Yang et al.

Circuit cutting enables large quantum circuits to run on small NISQ devices, but it introduces an exponentially high sampling overhead. Here, we present CutVQA, a co-design framework that integrates circuit cutting with quantum architecture search to scale VQAs. CutVQA performs cutting-aware architecture search and applies subcircuit-level optimization enabled by parameter locality, reducing both reconstruction and training overhead. Evaluations on two representative VQAs (QAOA and VQE) show that CutVQA matches baseline accuracy while reducing sampling overhead by 2-3 orders of magnitude and shortening training time by at least 50%, demonstrating that co-design is essential for scaling VQA execution.

Hua Zheng, Wei Xie

Built on our previous study on green simulation assisted policy gradient (GS-PG) focusing on trajectory-based reuse, in this paper, we consider infinite-horizon Markov Decision Processes and create a new importance sampling based policy gradient optimization approach to support dynamic decision making. The existing GS-PG method was designed to learn from complete episodes or process trajectories, which limits its applicability to low-data situations and flexible online process control. To overcome this limitation, the proposed approach can selectively reuse the most related partial trajectories, i.e., the reuse unit is based on per-step or per-decision historical observations. In specific, we create a mixture likelihood ratio (MLR) based policy gradient optimization that can leverage the information from historical state-action transitions generated under different behavioral policies. The proposed variance reduction experience replay (VRER) approach can intelligently select and reuse most relevant transition observations, improve the policy gradient estimation, and accelerate the learning of optimal policy. Our empirical study demonstrates that it can improve optimization convergence and enhance the performance of state-of-the-art policy optimization approaches such as actor-critic method and proximal policy optimizations.

Hua Zheng, Wei Xie, M. Ben Feng

For reinforcement learning on complex stochastic systems where many factors dynamically impact the output trajectories, it is desirable to effectively leverage the information from historical samples collected in previous iterations to accelerate policy optimization. Classical experience replay allows agents to remember by reusing historical observations. However, the uniform reuse strategy that treats all observations equally overlooks the relative importance of different samples. To overcome this limitation, we propose a general variance reduction based experience replay (VRER) framework that can selectively reuse the most relevant samples to improve policy gradient estimation. This selective mechanism can adaptively put more weight on past samples that are more likely to be generated by the current target distribution. Our theoretical and empirical studies show that the proposed VRER can accelerate the learning of optimal policy and enhance the performance of state-of-the-art policy optimization approaches.

Hua Zheng, Wei Xie, M. Ben Feng et al.

Effective reinforcement learning (RL) for complex stochastic systems requires leveraging historical data collected in previous iterations to accelerate policy optimization. Classical experience replay treats all past observations uniformly and fails to account for their varying contributions to learning. To overcome this limitation, we propose Variance Reduction Experience Replay (VRER), a principled framework that selectively reuses informative samples to reduce variance in policy gradient estimation. VRER is algorithm-agnostic and integrates seamlessly with existing policy optimization methods, forming the basis of our sample-efficient off-policy algorithm, Policy Gradient with VRER (PG-VRER). Motivated by the lack of rigorous theoretical analysis of experience replay, we develop a novel framework that explicitly captures dependencies introduced by Markovian dynamics and behavior-policy interactions. Using this framework, we establish finite-time convergence guarantees for PG-VRER and reveal a fundamental bias-variance trade-off: reusing older experience increases bias but simultaneously reduces gradient variance. Extensive empirical experiments demonstrate that VRER consistently accelerates policy learning and improves performance over state-of-the-art policy optimization algorithms.

Lequan Chen, Wei Xie, Zhigang Tu et al.

Person Search is designed to jointly solve the problems of Person Detection and Person Re-identification (Re-ID), in which the target person will be located in a large number of uncut images. Over the past few years, Person Search based on deep learning has made great progress. Visual character attributes play a key role in retrieving the query person, which has been explored in Re-ID but has been ignored in Person Search. So, we introduce attribute learning into the model, allowing the use of attribute features for retrieval task. Specifically, we propose a simple and effective model called Multi-Attribute Enhancement (MAE) which introduces attribute tags to learn local features. In addition to learning the global representation of pedestrians, it also learns the local representation, and combines the two aspects to learn robust features to promote the search performance. Additionally, we verify the effectiveness of our module on the existing benchmark dataset, CUHK-SYSU and PRW. Ultimately, our model achieves state-of-the-art among end-to-end methods, especially reaching 91.8% of mAP and 93.0% of rank-1 on CUHK-SYSU.Codes and models are available at https://github.com/chenlq123/MAE.

Zhenhua Wang, Wei Xie, Baosheng Wang et al.

Large Language Models (LLMs) have gradually become the gateway for people to acquire new knowledge. However, attackers can break the model's security protection ("jail") to access restricted information, which is called "jailbreaking." Previous studies have shown the weakness of current LLMs when confronted with such jailbreaking attacks. Nevertheless, comprehension of the intrinsic decision-making mechanism within the LLMs upon receipt of jailbreak prompts is noticeably lacking. Our research provides a psychological explanation of the jailbreak prompts. Drawing on cognitive consistency theory, we argue that the key to jailbreak is guiding the LLM to achieve cognitive coordination in an erroneous direction. Further, we propose an automatic black-box jailbreaking method based on the Foot-in-the-Door (FITD) technique. This method progressively induces the model to answer harmful questions via multi-step incremental prompts. We instantiated a prototype system to evaluate the jailbreaking effectiveness on 8 advanced LLMs, yielding an average success rate of 83.9%. This study builds a psychological perspective on the explanatory insights into the intrinsic decision-making logic of LLMs.

Peihong Lin, Pengfei Wang, Xu Zhou et al.

The state-of-the-art DGF techniques redefine and optimize the fitness metric to reach the target sites precisely and quickly. However, optimizations for fitness metrics are mainly based on heuristic algorithms, which usually rely on historical execution information and lack foresight on paths that have not been exercised yet. Thus, those hard-to-execute paths with complex constraints would hinder DGF from reaching the targets, making DGF less efficient. In this paper, we propose DeepGo, a predictive directed grey-box fuzzer that can combine historical and predicted information to steer DGF to reach the target site via an optimal path. We first propose the path transition model, which models DGF as a process of reaching the target site through specific path transition sequences. The new seed generated by mutation would cause the path transition, and the path corresponding to the high-reward path transition sequence indicates a high likelihood of reaching the target site through it. Then, to predict the path transitions and the corresponding rewards, we use deep neural networks to construct a Virtual Ensemble Environment (VEE), which gradually imitates the path transition model and predicts the rewards of path transitions that have not been taken yet. To determine the optimal path, we develop a Reinforcement Learning for Fuzzing (RLF) model to generate the transition sequences with the highest sequence rewards. The RLF model can combine historical and predicted path transitions to generate the optimal path transition sequences, along with the policy to guide the mutation strategy of fuzzing. Finally, to exercise the high-reward path transition sequence, we propose the concept of an action group, which comprehensively optimizes the critical steps of fuzzing to realize the optimal path to reach the target efficiently.

Jiaqi Yang, Wei Xie, Xiaohua Xu

Quantum neural networks (QNNs) play an important role as an emerging technology in the rapidly growing field of quantum machine learning. While their empirical success is evident, the theoretical explorations of QNNs, particularly their generalization properties, are less developed and primarily focus on the uniform convergence approach. In this paper, we exploit an advanced tool in classical learning theory, i.e., algorithmic stability, to study the generalization of QNNs. We first establish high-probability generalization bounds for QNNs via uniform stability. Our bounds shed light on the key factors influencing the generalization performance of QNNs and provide practical insights into both the design and training processes. We next explore the generalization of QNNs on near-term noisy intermediate-scale quantum (NISQ) devices, highlighting the potential benefits of quantum noise. Moreover, we argue that our previous analysis characterizes worst-case generalization guarantees, and we establish a refined optimization-dependent generalization bound for QNNs via on-average stability. Numerical experiments on various real-world datasets support our theoretical findings.

Hao Feng, Zhi Zuo, Jia-Hui Pan et al.

We introduce \textit{WonderVerse}, a simple but effective framework for generating extendable 3D scenes. Unlike existing methods that rely on iterative depth estimation and image inpainting, often leading to geometric distortions and inconsistencies, WonderVerse leverages the powerful world-level priors embedded within video generative foundation models to create highly immersive and geometrically coherent 3D environments. Furthermore, we propose a new technique for controllable 3D scene extension to substantially increase the scale of the generated environments. Besides, we introduce a novel abnormal sequence detection module that utilizes camera trajectory to address geometric inconsistency in the generated videos. Finally, WonderVerse is compatible with various 3D reconstruction methods, allowing both efficient and high-quality generation. Extensive experiments on 3D scene generation demonstrate that our WonderVerse, with an elegant and simple pipeline, delivers extendable and highly-realistic 3D scenes, markedly outperforming existing works that rely on more complex architectures.

Jiaqi Yang, Xiaohua Xu, Wei Xie

Quantum process tomography (QPT) is a fundamental tool for fully characterizing quantum systems. It relies on querying a set of quantum states as input to the quantum process. Previous QPT methods typically employ a straightforward strategy for randomly selecting quantum states, overlooking differences in informativeness among them. In this work, we propose a general active learning (AL) framework that adaptively selects the most informative subset of quantum states for reconstruction. We design and evaluate various AL algorithms and provide practical guidelines for selecting suitable methods in different scenarios. In particular, we introduce a learning framework that leverages the widely-used variational quantum circuits (VQCs) to perform the QPT task and integrate our AL algorithms into the query step. We demonstrate our algorithms by reconstructing the unitary quantum processes resulting from random quantum circuits with up to seven qubits. Numerical results show that our AL algorithms achieve significantly improved reconstruction, and the improvement increases with the size of the underlying quantum system. Our work opens new avenues for further advancing existing QPT methods.

Wei Xie, Shuoyoucheng Ma, Zhenhua Wang et al.

The cognitive mechanism by which Large Language Models (LLMs) solve mathematical problems remains a widely debated and unresolved issue. Currently, there is little interpretable experimental evidence that connects LLMs' problem-solving with human cognitive psychology.To determine if LLMs possess human-like mathematical reasoning, we modified the problems used in the human Cognitive Reflection Test (CRT). Our results show that, even with the use of Chains of Thought (CoT) prompts, mainstream LLMs, including the latest o1 model (noted for its reasoning capabilities), have a high error rate when solving these modified CRT problems. Specifically, the average accuracy rate dropped by up to 50% compared to the original questions.Further analysis of LLMs' incorrect answers suggests that they primarily rely on pattern matching from their training data, which aligns more with human intuition (System 1 thinking) rather than with human-like reasoning (System 2 thinking). This finding challenges the belief that LLMs have genuine mathematical reasoning abilities comparable to humans. As a result, this work may adjust overly optimistic views on LLMs' progress towards artificial general intelligence.

Yuming Zeng, Wei Xie, Keqi Wang

Stochastic reaction networks governed by Chemical Langevin Equations (CLE) exhibit pronounced multiscale dynamics spanning fast molecular reactions, intermediate transport, and slow cellular regulation, posing significant challenges for efficient and accurate simulation. Although operator splitting naturally decouples fast and slow subsystems, a rigorous error characterization for CLE splitting schemes has been lacking. We propose a modular operator-splitting framework with adaptive discretization that enables reliable and efficient simulation across fast-slow dynamics with explicit control of discretization error. Using stochastic logarithmic representations, we present a complete error analysis of the fast-slow Lie-Trotter splitting method, decomposing the one-step error into stochastic flow truncation error, commutator errors due to subsystem noncommutativity, and numerical discretization errors from fast and slow integrations. Guided by this analysis, we develop a proportional-integral (PI) adaptive controller that jointly selects macro time steps and fast microsteps, achieving substantial efficiency gains while maintaining accuracy.

Wandi Xu, Wei Xie

Biopharmaceutical manufacturing is vital to public health but lacks the agility for rapid, on-demand production of biotherapeutics due to the complexity and variability of bioprocesses. To overcome this, we introduce RApid PosTeriOR GENerator (RAPTOR-GEN), a mechanism-informed Bayesian learning framework designed to accelerate intelligent digital twin development from sparse and heterogeneous experimental data. This framework is built on a multi-scale probabilistic knowledge graph (pKG), formulated as a stochastic differential equation (SDE)-based foundational model that captures the nonlinear dynamics of bioprocesses. RAPTOR-GEN consists of two ingredients: (i) an interpretable metamodel integrating linear noise approximation (LNA) that exploits the structural information of bioprocessing mechanisms and a sequential learning strategy to fuse heterogeneous and sparse data, enabling inference of latent state variables and explicit approximation of the intractable likelihood function; and (ii) an efficient Bayesian posterior sampling method that utilizes Langevin diffusion (LD) to accelerate posterior exploration by exploiting the gradients of the derived likelihood. It generalizes the LNA approach to circumvent the challenge of step size selection, facilitating robust learning of mechanistic parameters with provable finite-sample performance guarantees. We develop a fast and robust RAPTOR-GEN algorithm with controllable error. Numerical experiments demonstrate its effectiveness in uncovering the underlying regulatory mechanisms of biomanufacturing processes.

Wei Xie, Shuoyoucheng Ma, Zhenhua Wang et al.

Large Language Models (LLMs) with hundreds of billions of parameters have exhibited human-like intelligence by learning from vast amounts of internet-scale data. However, the uninterpretability of large-scale neural networks raises concerns about the reliability of LLM. Studies have attempted to assess the psychometric properties of LLMs by borrowing concepts from human psychology to enhance their interpretability, but they fail to account for the fundamental differences between LLMs and humans. This results in high rejection rates when human scales are reused directly. Furthermore, these scales do not support the measurement of LLM psychological property variations in different languages. This paper introduces AIPsychoBench, a specialized benchmark tailored to assess the psychological properties of LLM. It uses a lightweight role-playing prompt to bypass LLM alignment, improving the average effective response rate from 70.12% to 90.40%. Meanwhile, the average biases are only 3.3% (positive) and 2.1% (negative), which are significantly lower than the biases of 9.8% and 6.9%, respectively, caused by traditional jailbreak prompts. Furthermore, among the total of 112 psychometric subcategories, the score deviations for seven languages compared to English ranged from 5% to 20.2% in 43 subcategories, providing the first comprehensive evidence of the linguistic impact on the psychometrics of LLM.

Qianhong Guo, Wei Xie, Xiaofang Cai et al.

Although large language models (LLMs) demonstrate remarkable capabilities across various tasks, evaluating their capabilities remains a challenging task. Existing evaluation methods suffer from issues such as data contamination, black-box operation, and subjective preference. These issues make it difficult to evaluate the LLMs' true capabilities comprehensively. To tackle these challenges, we propose a novel benchmark-free evaluation paradigm, LLM-Crowdsourced. It utilizes LLMs to generate questions, answer independently, and evaluate mutually. This method integrates four key evaluation criteria: dynamic, transparent, objective, and professional, which existing evaluation methods cannot satisfy simultaneously. Experiments on eight mainstream LLMs across mathematics and programming verify the advantages of our method in distinguishing LLM performance. Furthermore, our study reveals several novel findings that are difficult for traditional methods to detect, including but not limited to: (1) Gemini demonstrates the highest original and professional question-design capabilities among others; (2) Some LLMs exhibit ''memorization-based answering'' by misrecognizing questions as familiar ones with a similar structure; (3) LLM evaluation results demonstrate high consistency (robustness).

Chuyun Deng, Na Liu, Wei Xie et al.

Radio maps reflect the spatial distribution of signal strength and are essential for applications like smart cities, IoT, and wireless network planning. However, reconstructing accurate radio maps from sparse measurements remains challenging. Traditional interpolation and inpainting methods lack environmental awareness, while many deep learning approaches depend on detailed scene data, limiting generalization. To address this, we propose MARS, a Multi-scale Aware Radiomap Super-resolution method that combines CNNs and Transformers with multi-scale feature fusion and residual connections. MARS focuses on both global and local feature extraction, enhancing feature representation across different receptive fields and improving reconstruction accuracy. Experiments across different scenes and antenna locations show that MARS outperforms baseline models in both MSE and SSIM, while maintaining low computational cost, demonstrating strong practical potential.

Keilung Choy, Wei Xie, Keqi Wang

Bioprocess mechanistic modeling is essential for advancing intelligent digital twin representation of biomanufacturing, yet challenges persist due to complex intracellular regulation, stochastic system behavior, and limited experimental data. This paper introduces a symbolic and statistical learning framework to identify key regulatory mechanisms and quantify model uncertainty. Bioprocess dynamics is formulated with stochastic differential equations characterizing intrinsic process variability, with a predefined set of candidate regulatory mechanisms constructed from biological knowledge. A Bayesian learning approach is developed, which is based on a joint learning of kinetic parameters and regulatory structure through a formulation of the mixture model. To enhance computational efficiency, a Metropolis-adjusted Langevin algorithm with adjoint sensitivity analysis is developed for posterior exploration. Compared to state-of-the-art Bayesian inference approaches, the proposed framework achieves improved sample efficiency and robust model selection. An empirical study demonstrates its ability to recover missing regulatory mechanisms and improve model fidelity under data-limited conditions.

Xuanwen Liang, Jiayu Chen, Eric Wai Ming Lee et al.

Data-driven crowd simulation models offer advantages in enhancing the accuracy and realism of simulations, and improving their generalizability is essential for promoting application. Current data-driven approaches are primarily designed for a single scenario, with very few models validated across more than two scenarios. It is still an open question to develop data-driven crowd simulation models with strong generalizibility. We notice that the key to addressing this challenge lies in effectively and accurately capturing the core common influential features that govern pedestrians' navigation across diverse scenarios. Particularly, we believe that visual information is one of the most dominant influencing features. In light of this, this paper proposes a data-driven model incorporating a refined visual information extraction method and exit cues to enhance generalizability. The proposed model is examined on four common fundamental modules: bottleneck, corridor, corner and T-junction. The evaluation results demonstrate that our model performs excellently across these scenarios, aligning with pedestrian movement in real-world experiments, and significantly outperforms the classical knowledge-driven model. Furthermore, we introduce a modular approach to apply our proposed model in composite scenarios, and the results regarding trajectories and fundamental diagrams indicate that our simulations closely match real-world patterns in the composite scenario. The research outcomes can provide inspiration for the development of data-driven crowd simulation models with high generalizability and advance the application of data-driven approaches.This work has been submitted to Elsevier for possible publication.

Hao Feng, Hao Sun, Wei Xie et al.

While dynamic novel view synthesis from 2D videos has seen progress, achieving efficient reconstruction and rendering of dynamic scenes remains a challenging task. In this paper, we introduce Disentangled 4D Gaussian Splatting (Disentangled4DGS), a novel representation and rendering pipeline that achieves real-time performance without compromising visual fidelity. Disentangled4DGS decouples the temporal and spatial components of 4D Gaussians, avoiding the need for slicing first and four-dimensional matrix calculations in prior methods. By projecting temporal and spatial deformations into dynamic 2D Gaussians and deferring temporal processing, we minimize redundant computations of 4DGS. Our approach also features a gradient-guided flow loss and temporal splitting strategy to reduce artifacts. Experiments demonstrate a significant improvement in rendering speed and quality, achieving 343 FPS when render 1352*1014 resolution images on a single RTX3090 while reducing storage requirements by at least 4.5%. Our approach sets a new benchmark for dynamic novel view synthesis, outperforming existing methods on both multi-view and monocular dynamic scene datasets.

Yingqi Yu, Honglin Chen, Jun Wu et al.

Quantum noise constitutes a fundamental obstacle to realizing practical quantum technologies. To address the pivotal challenge of identifying quantum systems least affected by noise, we introduce the purest quantum state identification, which can be used to improve the accuracy of quantum computation and communication. We formulate a rigorous paradigm for identifying the purest quantum state among $K$ unknown $n$-qubit quantum states using total $N$ quantum state copies. For incoherent strategies, we derive the first adaptive algorithm achieving error probability $\exp\left(- Ω\left(\frac{N H_1}{\log(K) 2^n }\right) \right)$, fundamentally improving quantum property learning through measurement optimization. By developing a coherent measurement protocol with error bound $\exp\left(- Ω\left(\frac{N H_2}{\log(K) }\right) \right)$, we demonstrate a significant separation from incoherent strategies, formally quantifying the power of quantum memory and coherent measurement. Furthermore, we establish a lower bound by demonstrating that all strategies with fixed two-outcome incoherent POVM must suffer error probability exceeding $ \exp\left( - O\left(\frac{NH_1}{2^n}\right)\right)$. This research advances the characterization of quantum noise through efficient learning frameworks. Our results establish theoretical foundations for noise-adaptive quantum property learning while delivering practical protocols for enhancing the reliability of quantum hardware.

Hua Zheng, Wei Xie, Ilya O. Ryzhov et al.

This paper presents a novel methodological framework, called the Actor-Simulator, that incorporates the calibration of digital twins into model-based reinforcement learning for more effective control of stochastic systems with complex nonlinear dynamics. Traditional model-based control often relies on restrictive structural assumptions (such as linear state transitions) and fails to account for parameter uncertainty in the model. These issues become particularly critical in industries such as biopharmaceutical manufacturing, where process dynamics are complex and not fully known, and only a limited amount of data is available. Our approach jointly calibrates the digital twin and searches for an optimal control policy, thus accounting for and reducing model error. We balance exploration and exploitation by using policy performance as a guide for data collection. This dual-component approach provably converges to the optimal policy, and outperforms existing methods in extensive numerical experiments based on the biopharmaceutical manufacturing domain.

Wei Xie

This study introduces a novel supervised learning approach for spiking neural networks that does not rely on traditional backpropagation. Instead, it employs spike-timing-dependent plasticity (STDP) within a supervised framework for image recognition tasks. The effectiveness of this method is demonstrated using the MNIST dataset. The model achieves approximately 40\% learning accuracy with just 10 training stimuli, where each category is exposed to the model only once during training (one-shot learning). With larger training samples, the accuracy increases up to 87\%, maintaining negligible ambiguity. Notably, with only 10 hidden neurons, the model reaches 89\% accuracy with around 10\% ambiguity. This proposed method offers a robust and efficient alternative to traditional backpropagation-based supervised learning techniques.

Fuqiang Cheng, Wei Xie, Hua Zheng

Biomanufacturing innovation relies on an efficient Design of Experiments (DoEs) to optimize processes and product quality. Traditional DoE methods, ignoring the underlying bioprocessing mechanisms, often suffer from a lack of interpretability and sample efficiency. This limitation motivates us to create a new optimal learning approach for digital twin model calibration. In this study, we consider the cell culture process multi-scale mechanistic model, also known as Biological System-of-Systems (Bio-SoS). This model with a modular design, composed of sub-models, allows us to integrate data across various production processes. To calibrate the Bio-SoS digital twin, we evaluate the mean squared error of model prediction and develop a computational approach to quantify the impact of parameter estimation error of individual sub-models on the prediction accuracy of digital twin, which can guide sample-efficient and interpretable DoEs.

Wandi Xu, Wei Xie

To support mechanism online learning and facilitate digital twin development for biomanufacturing processes, this paper develops an efficient Bayesian inference approach for partially observed enzymatic stochastic reaction network (SRN), a fundamental building block of multi-scale bioprocess mechanistic model. To tackle the critical challenges brought by the nonlinear stochastic differential equations (SDEs)-based mechanistic model with partially observed state and having measurement errors, an interpretable Bayesian updating linear noise approximation (LNA) metamodel, incorporating the structure information of the mechanistic model, is proposed to approximate the likelihood of observations. Then, an efficient posterior sampling approach is developed by utilizing the gradients of the derived likelihood to speed up the convergence of Markov Chain Monte Carlo (MCMC). The empirical study demonstrates that the proposed approach has a promising performance.

Hua Zheng, Wei Xie, Keqi Wang et al.

Driven by the key challenges of cell therapy manufacturing, including high complexity, high uncertainty, and very limited process observations, we propose a hybrid model-based reinforcement learning (RL) to efficiently guide process control. We first create a probabilistic knowledge graph (KG) hybrid model characterizing the risk- and science-based understanding of biomanufacturing process mechanisms and quantifying inherent stochasticity, e.g., batch-to-batch variation. It can capture the key features, including nonlinear reactions, nonstationary dynamics, and partially observed state. This hybrid model can leverage existing mechanistic models and facilitate learning from heterogeneous process data. A computational sampling approach is used to generate posterior samples quantifying model uncertainty. Then, we introduce hybrid model-based Bayesian RL, accounting for both inherent stochasticity and model uncertainty, to guide optimal, robust, and interpretable dynamic decision making. Cell therapy manufacturing examples are used to empirically demonstrate that the proposed framework can outperform the classical deterministic mechanistic model assisted process optimization.

Hua Zheng, Wei Xie, M. Ben Feng

Experience replay is a core ingredient of modern deep reinforcement learning, yet its benefits in policy optimization are poorly understood beyond empirical heuristics. This paper develops a novel theoretical framework for experience replay in modern policy gradient methods, where two sources of dependence fundamentally complicate analysis: Markovian correlations along trajectories and policy drift across optimization iterations. We introduce a new proof technique based on auxiliary Markov chains and lag-based decoupling that makes these dependencies tractable. Within this framework, we derive finite-time bias bounds for policy-gradient estimators under replay, identifying how bias scales with the cumulative policy update, the mixing time of the underlying dynamics, and the age of buffered data, thereby formalizing the practitioner's rule of avoiding overly stale replay. We further provide a correlation-aware variance decomposition showing how sample dependence governs gradient variance from replay and when replay is beneficial. Building on these characterizations, we establish the finite-time convergence guarantees for experience-replay-based policy optimization, explicitly quantifying how buffer size, sample correlation, and mixing jointly determine the convergence rate and revealing an inherent bias-variance trade-off: larger buffers can reduce variance by averaging less correlated samples but can increase bias as data become stale. These results offer a principled guide for buffer sizing and replay schedules, bridging prior empirical findings with quantitative theory.

Hua Zheng, Jiahao Zhu, Wei Xie et al.

Patients with severe Coronavirus disease 19 (COVID-19) typically require supplemental oxygen as an essential treatment. We developed a machine learning algorithm, based on a deep Reinforcement Learning (RL), for continuous management of oxygen flow rate for critical ill patients under intensive care, which can identify the optimal personalized oxygen flow rate with strong potentials to reduce mortality rate relative to the current clinical practice. Basically, we modeled the oxygen flow trajectory of COVID-19 patients and their health outcomes as a Markov decision process. Based on individual patient characteristics and health status, a reinforcement learning based oxygen control policy is learned and real-time recommends the oxygen flow rate to reduce the mortality rate. We assessed the performance of proposed methods through cross validation by using a retrospective cohort of 1,372 critically ill patients with COVID-19 from New York University Langone Health ambulatory care with electronic health records from April 2020 to January 2021. The mean mortality rate under the RL algorithm is lower than standard of care by 2.57% (95% CI: 2.08- 3.06) reduction (P<0.001) from 7.94% under the standard of care to 5.37 % under our algorithm and the averaged recommended oxygen flow rate is 1.28 L/min (95% CI: 1.14-1.42) lower than the rate actually delivered to patients. Thus, the RL algorithm could potentially lead to better intensive care treatment that can reduce mortality rate, while saving the oxygen scarce resources. It can reduce the oxygen shortage issue and improve public health during the COVID-19 pandemic.

Hua Zheng, Wei Xie, Ilya O. Ryzhov et al.

Biopharmaceutical manufacturing is a rapidly growing industry with impact in virtually all branches of medicines. Biomanufacturing processes require close monitoring and control, in the presence of complex bioprocess dynamics with many interdependent factors, as well as extremely limited data due to the high cost of experiments as well as the novelty of personalized bio-drugs. We develop a novel model-based reinforcement learning framework that can achieve human-level control in low-data environments. The model uses a dynamic Bayesian network to capture causal interdependencies between factors and predict how the effects of different inputs propagate through the pathways of the bioprocess mechanisms. This enables the design of process control policies that are both interpretable and robust against model risk. We present a computationally efficient, provably convergence stochastic gradient method for optimizing such policies. Validation is conducted on a realistic application with a multi-dimensional, continuous state variable.

Bo Wang, Wei Xie, Tugce Martagan et al.

In biopharmaceutical manufacturing, fermentation processes play a critical role in productivity and profit. A fermentation process uses living cells with complex biological mechanisms, leading to high variability in the process outputs, namely, the protein and impurity levels. By building on the biological mechanisms of protein and impurity growth, we introduce a stochastic model to characterize the accumulation of the protein and impurity levels in the fermentation process. However, a common challenge in the industry is the availability of only a very limited amount of data, especially in the development and early stages of production. This adds an additional layer of uncertainty, referred to as model risk, due to the difficulty of estimating the model parameters with limited data. In this paper, we study the harvesting decision for a fermentation process (i.e., when to stop the fermentation and collect the production reward) under model risk. We adopt a Bayesian approach to update the unknown parameters of the growth-rate distributions, and use the resulting posterior distributions to characterize the impact of model risk on fermentation output variability. The harvesting problem is formulated as a Markov decision process model with knowledge states that summarize the posterior distributions and hence incorporate the model risk in decision-making. Our case studies at MSD Animal Health demonstrate that the proposed model and solution approach improve the harvesting decisions in real life by achieving substantially higher average output from a fermentation batch along with lower batch-to-batch variability.

Hua Zheng, Ilya O. Ryzhov, Wei Xie et al.

Comorbid chronic conditions are common among people with type 2 diabetes. We developed an Artificial Intelligence algorithm, based on Reinforcement Learning (RL), for personalized diabetes and multi-morbidity management with strong potential to improve health outcomes relative to current clinical practice. In this paper, we modeled glycemia, blood pressure and cardiovascular disease (CVD) risk as health outcomes using a retrospective cohort of 16,665 patients with type 2 diabetes from New York University Langone Health ambulatory care electronic health records in 2009 to 2017. We trained a RL prescription algorithm that recommends a treatment regimen optimizing patients' cumulative health outcomes using their individual characteristics and medical history at each encounter. The RL recommendations were evaluated on an independent subset of patients. The results demonstrate that the proposed personalized reinforcement learning prescriptive framework for type 2 diabetes yielded high concordance with clinicians' prescriptions and substantial improvements in glycemia, blood pressure, cardiovascular disease risk outcomes.

Keqi Wang, Wei Xie, Wencen Wu et al.

After being legalized as an agricultural commodity by the 2018 U.S. Farm Bill, the Industrial Hemp production is moved from limited pilot programs to a regulated agriculture production system, and the market keeps increasing since then. However, Industrial Hemp Supply Chain (IHSC) faces several critical challenges, including high complexity and variability, data tampering, and lack of immutable information tracking system. In this paper, we develop a blockchain enabled internet-of-things (IoT) platform for IHSC to support process tracking, scalability, interoperability, and risk management. Basically, we create a two-layer blockchain with proof-of-authority based smart contract, which can leverage local authorities with state/federal regulators to ensure and accelerate quality control verification and regulatory compliance. Then, we develop a user-friendly mobile app so that each participant can use smart phone to real-time collect and upload their data to the cloud, and further share the process verification and tracking information through the blockchain network. Our study indicates the proposed platform can support interoperability, improve the efficiency of quality control verification, and ensure the safety of regulated IHSC.

Keqi Wang, Wei Xie, Wencen Wu et al.

With the passage of the 2018 U.S. Farm Bill, Industrial Hemp production is moved from limited pilot programs to a regulated agriculture production system. However, Industrial Hemp Supply Chain (IHSC) faces critical challenges, including: high complexity and variability, very limited production knowledge, lack of data and information tracking. In this paper, we propose blockchain-enabled IHSC and develop a preliminary simulation-based digital twin for this distributed cyber-physical system (CPS) to support the process learning and risk management. Basically, we develop a two-layer blockchain with proof of authority smart contract, which can track the data and key information, improve the supply chain transparency, and leverage local authorities and state regulators to ensure the quality control verification. Then, we introduce a stochastic simulation-based digital twin for IHSC risk management, which can characterize the process spatial-temporal causal interdependencies and dynamic evolution to guide risk control and decision making. Our empirical study demonstrates the promising performance of proposed platform.

Hua Zheng, Wei Xie, Mingbin Ben Feng

Biopharmaceutical manufacturing faces critical challenges, including complexity, high variability, lengthy lead time, and limited historical data and knowledge of the underlying system stochastic process. To address these challenges, we propose a green simulation assisted model-based reinforcement learning to support process online learning and guide dynamic decision making. Basically, the process model risk is quantified by the posterior distribution. At any given policy, we predict the expected system response with prediction risk accounting for both inherent stochastic uncertainty and model risk. Then, we propose green simulation assisted reinforcement learning and derive the mixture proposal distribution of decision process and likelihood ratio based metamodel for the policy gradient, which can selectively reuse process trajectory outputs collected from previous experiments to increase the simulation data-efficiency, improve the policy gradient estimation accuracy, and speed up the search for the optimal policy. Our numerical study indicates that the proposed approach demonstrates the promising performance.

Wei Xie, Yuan Yi, Hua Zheng

To integrate strategic, tactical and operational decisions, the two-stage optimization has been widely used to guide dynamic decision making. In this paper, we study the two-stage stochastic programming for complex systems with unknown response estimated by simulation. We introduce the global-local metamodel assisted two-stage optimization via simulation that can efficiently employ the simulation resource to iteratively solve for the optimal first- and second-stage decisions. Specifically, at each visited first-stage decision, we develop a local metamodel to simultaneously solve a set of scenario-based second-stage optimization problems, which also allows us to estimate the optimality gap. Then, we construct a global metamodel accounting for the errors induced by: (1) using a finite number of scenarios to approximate the expected future cost occurring in the planning horizon, (2) second-stage optimality gap, and (3) finite visited first-stage decisions. Assisted by the global-local metamodel, we propose a new simulation optimization approach that can efficiently and iteratively search for the optimal first- and second-stage decisions. Our framework can guarantee the convergence of optimal solution for the discrete two-stage optimization with unknown objective, and the empirical study indicates that it achieves substantial efficiency and accuracy.

Wei Xie, Bo Wang, Cheng Li et al.

While biomanufacturing plays a significant role in supporting the economy and ensuring public health, it faces critical challenges, including complexity, high variability, lengthy lead time, and very limited process data, especially for personalized new cell and gene biotherapeutics. Driven by these challenges, we propose an interpretable semantic bioprocess probabilistic knowledge graph and develop a game theory based risk and sensitivity analyses for production process to facilitate quality-by-design and stability control. Specifically, by exploring the causal relationships and interactions of critical process parameters and quality attributes (CPPs/CQAs), we create a Bayesian network based probabilistic knowledge graph characterizing the complex causal interdependencies of all factors. Then, we introduce a Shapley value based sensitivity analysis, which can correctly quantify the variation contribution from each input factor on the outputs (i.e., productivity, product quality). Since the bioprocess model coefficients are learned from limited process observations, we derive the Bayesian posterior distribution to quantify model uncertainty and further develop the Shapley value based sensitivity analysis to evaluate the impact of estimation uncertainty from each set of model coefficients. Therefore, the proposed bioprocess risk and sensitivity analyses can identify the bottlenecks, guide the reliable process specifications and the most "informative" data collection, and improve production stability.

Wei Xie, Yang Wang, Steven M. Boker et al.

Safeguarding privacy in machine learning is highly desirable, especially in collaborative studies across many organizations. Privacy-preserving distributed machine learning (based on cryptography) is popular to solve the problem. However, existing cryptographic protocols still incur excess computational overhead. Here, we make a novel observation that this is partially due to naive adoption of mainstream numerical optimization (e.g., Newton method) and failing to tailor for secure computing. This work presents a contrasting perspective: customizing numerical optimization specifically for secure settings. We propose a seemingly less-favorable optimization method that can in fact significantly accelerate privacy-preserving logistic regression. Leveraging this new method, we propose two new secure protocols for conducting logistic regression in a privacy-preserving and distributed manner. Extensive theoretical and empirical evaluations prove the competitive performance of our two secure proposals while without compromising accuracy or privacy: with speedup up to 2.3x and 8.1x, respectively, over state-of-the-art; and even faster as data scales up. Such drastic speedup is on top of and in addition to performance improvements from existing (and future) state-of-the-art cryptography. Our work provides a new way towards efficient and practical privacy-preserving logistic regression for large-scale studies which are common for modern science.

Ru-Ze Liang, Wei Xie, Weizhi Li et al.

In this paper, we propose a novel learning framework for the problem of domain transfer learning. We map the data of two domains to one single common space, and learn a classifier in this common space. Then we adapt the common classifier to the two domains by adding two adaptive functions to it respectively. In the common space, the target domain data points are weighted and matched to the target domain in term of distributions. The weighting terms of source domain data points and the target domain classification responses are also regularized by the local reconstruction coefficients. The novel transfer learning framework is evaluated over some benchmark cross-domain data sets, and it outperforms the existing state-of-the-art transfer learning methods.