Alexander Lobashev

Nikita Turko, Alexander Lobashev, Konstantin Ushakov et al.

We propose a new approach to the optimal placement of sensors for the problem of reconstructing geophysical fields from sparse measurements. Our method consists of two stages. In the first stage, we estimate the variability of the physical field as a function of spatial coordinates by approximating its information entropy through the Conditional PixelCNN network. To calculate the entropy, a new ordering of a two-dimensional data array (spiral ordering) is proposed, which makes it possible to obtain the entropy of a physical field simultaneously for several spatial scales. In the second stage, the entropy of the physical field is used to initialize the distribution of optimal sensor locations. This distribution is further optimized with the Concrete Autoencoder architecture with the straight-through gradient estimator and adversarial loss to simultaneously minimize the number of sensors and maximize reconstruction accuracy. Our method scales linearly with data size, unlike commonly used Principal Component Analysis. We demonstrate our method on the two examples: (a) temperature and (b) salinity fields around the Barents Sea and the Svalbard group of islands. For these examples, we compute the reconstruction error of our method and a few baselines. We test our approach against two baselines (1) PCA with QR factorization and (2) climatology. We find out that the obtained optimal sensor locations have clear physical interpretation and correspond to the boundaries between sea currents.

Alexander Lobashev, Mikhail V. Tamm

We introduce a new approach to reconstruction of the thermodynamic functions and phase boundaries in two-parametric statistical mechanics systems. Our method is based on expressing the Fisher metric in terms of the posterior distributions over a space of external parameters and approximating the metric field by a Hessian of a convex function. We use the proposed approach to accurately reconstruct the partition functions and phase diagrams of the Ising model and the exactly solvable non-equilibrium TASEP without any a priori knowledge about microscopic rules of the models. We also demonstrate how our approach can be used to visualize the latent space of StyleGAN models and evaluate the variability of the generated images.

Alexander Lobashev, Dmitry Guskov, Kirill Polovnikov

Fractional Brownian motion (fBm) features both randomness and strong scale-free correlations, challenging generative models to reproduce the intrinsic memory characterizing the underlying stochastic process. Here we examine a zoo of diffusion-based inpainting methods on a specific dataset of corrupted images, which represent incomplete Euclidean distance matrices (EDMs) of fBm at various memory exponents $H$. Our dataset implies uniqueness of the data imputation in the regime of low missing ratio, where the remaining partial graph is rigid, providing the ground truth for the inpainting. We find that the conditional diffusion generation readily reproduces the built-in correlations of fBm paths in different memory regimes (i.e., for sub-, Brownian and super-diffusion trajectories), providing a robust tool for the statistical imputation at high missing ratio. Furthermore, while diffusion models have been recently shown to memorize samples from the training database, we demonstrate that diffusion behaves qualitatively different from the database search and thus generalize rather than memorize the training dataset. As a biological application, we apply our fBm-trained diffusion model for the imputation of microscopy-derived distance matrices of chromosomal segments (FISH data) - incomplete due to experimental imperfections - and demonstrate its superiority over the standard approaches used in bioinformatics.