Xilin Liu

Zongyan Yao, Xilin Liu

This paper proposes a deep learning (DL) model for automatic sleep stage classification based on single-channel EEG data. The DL model features a convolutional neural network (CNN) and transformers. The model was designed to run on energy and memory-constrained devices for real-time operation with local processing. The Fpz-Cz EEG signals from a publicly available Sleep-EDF dataset are used to train and test the model. Four convolutional filter layers were used to extract features and reduce the data dimension. Then, transformers were utilized to learn the time-variant features of the data. To improve performance, we also implemented a subject specific training before the inference (i.e., prediction) stage. With the subject specific training, the F1 score was 0.91, 0.37, 0.84, 0.877, and 0.73 for wake, N1-N3, and rapid eye movement (REM) stages, respectively. The performance of the model was comparable to the state-of-the-art works with significantly greater computational costs. We tested a reduced-sized version of the proposed model on a low-cost Arduino Nano 33 BLE board and it was fully functional and accurate. In the future, a fully integrated wireless EEG sensor with edge DL will be developed for sleep research in pre-clinical and clinical experiments, such as real-time sleep modulation.

Ourong Lin, Tian Yu, Yuhan Hou et al.

This paper presents the design of a wireless sensor network for detecting and alerting the freezing of gait (FoG) symptoms in patients with Parkinson's disease. Three sensor nodes, each integrating a 3-axis accelerometer, can be placed on a patient at ankle, thigh, and truck. Each sensor node can independently detect FoG using an on-device deep learning (DL) model, featuring a squeeze and excitation convolutional neural network (CNN). In a validation using a public dataset, the prototype developed achieved a FoG detection sensitivity of 88.8% and an F1 score of 85.34%, using less than 20 k trainable parameters per sensor node. Once FoG is detected, an auditory signal will be generated to alert users, and the alarm signal will also be sent to mobile phones for further actions if needed. The sensor node can be easily recharged wirelessly by inductive coupling. The system is self-contained and processes all user data locally without streaming data to external devices or the cloud, thus eliminating the cybersecurity risks and power penalty associated with wireless data transmission. The developed methodology can be used in a wide range of applications.

Mingzhe Sun, Aaron Zhou, Naize Yang et al.

Closed-loop sleep modulation is an emerging research paradigm to treat sleep disorders and enhance sleep benefits. However, two major barriers hinder the widespread application of this research paradigm. First, subjects often need to be wire-connected to rack-mount instrumentation for data acquisition, which negatively affects sleep quality. Second, conventional real-time sleep stage classification algorithms give limited performance. In this work, we conquer these two limitations by developing a sleep modulation system that supports closed-loop operations on the device. Sleep stage classification is performed using a lightweight deep learning (DL) model accelerated by a low-power field-programmable gate array (FPGA) device. The DL model uses a single channel electroencephalogram (EEG) as input. Two convolutional neural networks (CNNs) are used to capture general and detailed features, and a bidirectional long-short-term memory (LSTM) network is used to capture time-variant sequence features. An 8-bit quantization is used to reduce the computational cost without compromising performance. The DL model has been validated using a public sleep database containing 81 subjects, achieving a state-of-the-art classification accuracy of 85.8% and a F1-score of 79%. The developed model has also shown the potential to be generalized to different channels and input data lengths. Closed-loop in-phase auditory stimulation has been demonstrated on the test bench.

Yanchen Wu, Tenghui Lin, Yingli Zhou et al.

Memory emerges as the core module in the large language model (LLM)-based agents for long-horizon complex tasks (e.g., multi-turn dialogue, game playing, scientific discovery), where memory can enable knowledge accumulation, iterative reasoning and self-evolution. A number of memory methods have been proposed in the literature. However, these methods have not been systematically and comprehensively compared under the same experimental settings. In this paper, we first summarize a unified framework that incorporates all the existing agent memory methods from a high-level perspective. We then extensively compare representative agent memory methods on two well-known benchmarks and examine the effectiveness of all methods, providing a thorough analysis of those methods. As a byproduct of our experimental analysis, we also design a new memory method by exploiting modules in the existing methods, which outperforms the state-of-the-art methods. Finally, based on these findings, we offer promising future research opportunities. We believe that a deeper understanding of the behavior of existing methods can provide valuable new insights for future research.

Jiawei Yu, Yixiang Fang, Xilin Liu et al.

Memory data are ubiquitous in Large Language Model (LLM)-based agents (e.g., OpenClaw and Manus). A few recent works have attempted to exploit agents'memory for improving their performance on the question-answering (QA) task, but they lack a principled mechanism for effectively modeling how memory data evolves over time and retrieving memory data effectively, leading to poor performance in memory utilization. To fill this gap, we present H-Mem, a novel memory mechanism via a hybrid structure that can not only effectively model the evolution of agent memory over a long period of time, but also provide an efficient memory retrieval approach. Particularly, H-Mem builds a temporal and semantic tree structure that allows the short-term memory data to evolve progressively into long-term memory data, where the latter provides summarized information about the former, while simultaneously constructing a knowledge graph to capture the relationships between entities in memory. Moreover, it offers an effective memory retrieval approach by exploiting the hybrid structure of the tree and graph structures. Extensive experiments on three agent memory benchmarks show that H-Mem achieves state-of-the-art performance on the QA task.

Dewu Zheng, Yanlin Wang, Ensheng Shi et al.

With the rapid advancement of large language models (LLMs), extensive research has been conducted to investigate the code generation capabilities of LLMs. However, existing efforts primarily focus on general-domain tasks, leaving LLMs' code generation performance in real-world application domains underexplored. This raises a critical question: can a model's general-domain coding ability reliably represent its ability in specialized domains? In this paper, we introduce DomainCodeBench, a multi-domain code generation benchmark designed to systematically evaluate LLMs across 12 software application domains and 15 programming languages. DomainCodeBench contains 2,400 manually verified tasks with ground truth, human-annotated docstrings, and fine-grained dependency information to ensure more coverage of domain-specific challenges. Specifically, we first identify the most popular application domains by topic mining. Then, we curate coding tasks based on commonly used frameworks and platforms in each domain. We obtain several findings through extensive experiments on DomainCodeBench with ten mainstream LLMs. (1) Performance decoupling: experiments reveal that top general-domain models do not consistently excel in specific application domains; (2) Domain-specific weaknesses: LLMs often fail due to domain knowledge gaps and third-party library misusage; (3) Contextual enhancement: we show that augmenting prompts with domain-specific knowledge improves performance by around 38.17%, providing actionable insights for performance optimization. Our replication package, including the benchmark, source code, and experimental results, is available at https://github.com/DeepSoftwareAnalytics/DomainCodeBench.

Yanli Wang, Yanlin Wang, Suiquan Wang et al.

Repository-level code translation refers to translating an entire code repository from one programming language to another while preserving the functionality of the source repository. Many benchmarks have been proposed to evaluate the performance of such code translators. However, previous benchmarks mostly provide fine-grained samples, focusing at either code snippet, function, or file-level code translation. Such benchmarks do not accurately reflect real-world demands, where entire repositories often need to be translated, involving longer code length and more complex functionalities. To address this gap, we propose a new benchmark, named RepoTransBench, which is a real-world repository-level code translation benchmark with an automatically executable test suite. We conduct experiments on RepoTransBench to evaluate the translation performance of 11 advanced LLMs. We find that the Success@1 score (test success in one attempt) of the best-performing LLM is only 7.33%. To further explore the potential of LLMs for repository-level code translation, we provide LLMs with error-related feedback to perform iterative debugging and observe an average 7.09% improvement on Success@1. However, even with this improvement, the Success@1 score of the best-performing LLM is only 21%, which may not meet the need for reliable automatic repository-level code translation. Finally, we conduct a detailed error analysis and highlight current LLMs' deficiencies in repository-level code translation, which could provide a reference for further improvements.

Yingli Zhou, Yaodong Su, Youran Sun et al.

Graph-based Retrieval-Augmented Generation (RAG) has proven effective in integrating external knowledge into large language models (LLMs), improving their factual accuracy, adaptability, interpretability, and trustworthiness. A number of graph-based RAG methods have been proposed in the literature. However, these methods have not been systematically and comprehensively compared under the same experimental settings. In this paper, we first summarize a unified framework to incorporate all graph-based RAG methods from a high-level perspective. We then extensively compare representative graph-based RAG methods over a range of questing-answering (QA) datasets -- from specific questions to abstract questions -- and examine the effectiveness of all methods, providing a thorough analysis of graph-based RAG approaches. As a byproduct of our experimental analysis, we are also able to identify new variants of the graph-based RAG methods over specific QA and abstract QA tasks respectively, by combining existing techniques, which outperform the state-of-the-art methods. Finally, based on these findings, we offer promising research opportunities. We believe that a deeper understanding of the behavior of existing methods can provide new valuable insights for future research.

Shu Wang, Yixiang Fang, Yingli Zhou et al.

Retrieval-Augmented Generation (RAG) has proven effective in integrating external knowledge into large language models (LLMs) for solving question-answer (QA) tasks. The state-of-the-art RAG approaches often use the graph data as the external data since they capture the rich semantic information and link relationships between entities. However, existing graph-based RAG approaches cannot accurately identify the relevant information from the graph and also consume large numbers of tokens in the online retrieval process. To address these issues, we introduce a novel graph-based RAG approach, called Attributed Community-based Hierarchical RAG (ArchRAG), by augmenting the question using attributed communities, and also introducing a novel LLM-based hierarchical clustering method. To retrieve the most relevant information from the graph for the question, we build a novel hierarchical index structure for the attributed communities and develop an effective online retrieval method. Experimental results demonstrate that ArchRAG outperforms existing methods in both accuracy and token cost.

Yangyi Wu, Tianqi Wang, Xilin Liu

With the development of Large Language Models (LLMs) in consulting, their role in moral decision-making has become prominent. However, existing research predominantly consider AI as an independent "moral agent" adhering to the "Human-AI Alignment" paradigm. In this study, we propose that AI should serve as a "moral assistant", facilitating users' moral growth through the "Art of Midwifery" rather than substituting human judgment. We endow LLMs with distinct persona archetypes and conducted dialogues across six moral scenarios. Findings reveal that while the virtue exemplar excelled overall, optimal performance was context-dependent: the Guardian Angel excelled in bioethical crises for emotional support, whereas the Socratic persona better elicited reflection in existential dilemmas. We introduce "Constructive Divergence", arguing that AI should offer alternative perspectives at critical moment rather than blindly accommodate users, transcending traditional alignment paradigms.

Yanlin Wang, Kefeng Duan, Dewu Zheng et al.

Code intelligence is an emerging domain in software engineering, aiming to improve the effectiveness and efficiency of various code-related tasks. Recent research suggests that incorporating contextual information beyond the basic original task inputs (i.e., source code) can substantially enhance model performance. Such contextual signals may be obtained directly or indirectly from sources such as API documentation or intermediate representations like abstract syntax trees can significantly improve the effectiveness of code intelligence. Despite growing academic interest, there is a lack of systematic analysis of context in code intelligence. To address this gap, we conduct an extensive literature review of 146 relevant studies published between September 2007 and August 2024. Our investigation yields four main contributions. (1) A quantitative analysis of the research landscape, including publication trends, venues, and the explored domains; (2) A novel taxonomy of context types used in code intelligence; (3) A task-oriented analysis investigating context integration strategies across diverse code intelligence tasks; (4) A critical evaluation of evaluation methodologies for context-aware methods. Based on these findings, we identify fundamental challenges in context utilization in current code intelligence systems and propose a research roadmap that outlines key opportunities for future research.

Yanlin Wang, Tianyue Jiang, Mingwei Liu et al.

Large language models (LLMs) have brought a paradigm shift to the field of code generation, offering the potential to enhance the software development process. However, previous research mainly focuses on the accuracy of code generation, while coding style differences between LLMs and human developers remain under-explored. In this paper, we empirically analyze the differences in coding style between the code generated by mainstream Code LLMs and the code written by human developers, and summarize coding style inconsistency taxonomy. Specifically, we first summarize the types of coding style inconsistencies by manually analyzing a large number of generation results. We then compare the code generated by Code LLMs with the code written by human programmers in terms of readability, conciseness, and robustness. The results reveal that LLMs and developers have different coding styles. Additionally, we study the possible causes of these inconsistencies and provide some solutions to alleviate the problem.

Junjun Wu, Huiyu Kuang, Qinghua Lu et al.

Image semantic segmentation technology is one of the key technologies for intelligent systems to understand natural scenes. As one of the important research directions in the field of visual intelligence, this technology has broad application scenarios in the fields of mobile robots, drones, smart driving, and smart security. However, in the actual application of mobile robots, problems such as inaccurate segmentation semantic label prediction and loss of edge information of segmented objects and background may occur. This paper proposes an improved structure of a semantic segmentation network based on a deep learning network that combines self-attention neural network and neural network architecture search methods. First, a neural network search method NAS (Neural Architecture Search) is used to find a semantic segmentation network with multiple resolution branches. In the search process, combine the self-attention network structure module to adjust the searched neural network structure, and then combine the semantic segmentation network searched by different branches to form a fast semantic segmentation network structure, and input the picture into the network structure to get the final forecast result. The experimental results on the Cityscapes dataset show that the accuracy of the algorithm is 69.8%, and the segmentation speed is 48/s. It achieves a good balance between real-time and accuracy, can optimize edge segmentation, and has a better performance in complex scenes. Good robustness is suitable for practical application.

Jiasong Wu, Fuzhi Wu, Qihan Yang et al.

One of the key challenges in the area of signal processing on graphs is to design transforms and dictionaries methods to identify and exploit structure in signals on weighted graphs. In this paper, we first generalize graph Fourier transform (GFT) to graph fractional Fourier transform (GFRFT), which is then used to define a novel transform named spectral graph fractional wavelet transform (SGFRWT), which is a generalized and extended version of spectral graph wavelet transform (SGWT). A fast algorithm for SGFRWT is also derived and implemented based on Fourier series approximation. The potential applications of SGFRWT are also presented.