Zhiming Zhao

Na Li, Yiyang Qi, Ruyue Xin et al.

Ocean and climate research benefits from global ocean observation initiatives such as Argo, GLOSS, and EMSO. The Argo network, dedicated to ocean profiling, generates a vast volume of observatory data. However, data quality issues from sensor malfunctions and transmission errors necessitate stringent quality assessment. Existing methods, including machine learning, fall short due to limited labeled data and imbalanced datasets. To address these challenges, we propose an ODEAL framework for ocean data quality assessment, employing AL to reduce human experts' workload in the quality assessment workflow and leveraging outlier detection algorithms for effective model initialization. We also conduct extensive experiments on five large-scale realistic Argo datasets to gain insights into our proposed method, including the effectiveness of AL query strategies and the initial set construction approach. The results suggest that our framework enhances quality assessment efficiency by up to 465.5% with the uncertainty-based query strategy compared to random sampling and minimizes overall annotation costs by up to 76.9% using the initial set built with outlier detectors.

Yuandou Wang, Neel Kanwal, Kjersti Engan et al.

Running deep neural networks for large medical images is a resource-hungry and time-consuming task with centralized computing. Outsourcing such medical image processing tasks to hybrid clouds has benefits, such as a significant reduction of execution time and monetary cost. However, due to privacy concerns, it is still challenging to process sensitive medical images over clouds, which would hinder their deployment in many real-world applications. To overcome this, we first formulate the overall optimization objectives of the privacy-preserving distributed system model, i.e., minimizing the amount of information about the private data learned by the adversaries throughout the process, reducing the maximum execution time and cost under the user budget constraint. We propose a novel privacy-preserving and cost-effective method called PriCE to solve this multi-objective optimization problem. We performed extensive simulation experiments for artifact detection tasks on medical images using an ensemble of five deep convolutional neural network inferences as the workflow task. Experimental results show that PriCE successfully splits a wide range of input gigapixel medical images with graph-coloring-based strategies, yielding desired output utility and lowering the privacy risk, makespan, and monetary cost under user's budget.

Nafis Tanveer Islam, Zhiming Zhao

Classical search engines using indexing methods in data infrastructures primarily allow keyword-based queries to retrieve content. While these indexing-based methods are highly scalable and efficient, due to a lack of an appropriate evaluation dataset and a limited understanding of semantics, they often fail to capture the user's intent and generate incomplete responses during evaluation. This problem also extends to domain-specific search systems that utilize a Knowledge Base (KB) to access data from various research infrastructures. Research infrastructures (RIs) from the environmental and earth science domain, which encompass the study of ecosystems, biodiversity, oceanography, and climate change, generate, share, and reuse large volumes of data. While there are attempts to provide a centralized search service using Elasticsearch as a knowledge base, they also face similar challenges in understanding queries with multiple intents. To address these challenges, we proposed an automated method to curate a domain-specific evaluation dataset to analyze the capability of a search system. Furthermore, we incorporate the Retrieval of Augmented Generation (RAG), powered by Large Language Models (LLMs), for high-quality retrieval of environmental domain data using natural language queries. Our quantitative and qualitative analysis of the evaluation dataset shows that LLM-based systems for information retrieval return results with higher precision when understanding queries with multiple intents, compared to Elasticsearch-based systems.

Zahra Tabatabaei, Yuandou Wang, Adrián Colomer et al.

The paper proposes a Federated Content-Based Medical Image Retrieval (FedCBMIR) platform that utilizes Federated Learning (FL) to address the challenges of acquiring a diverse medical data set for training CBMIR models. CBMIR assists pathologists in diagnosing breast cancer more rapidly by identifying similar medical images and relevant patches in prior cases compared to traditional cancer detection methods. However, CBMIR in histopathology necessitates a pool of Whole Slide Images (WSIs) to train to extract an optimal embedding vector that leverages search engine performance, which may not be available in all centers. The strict regulations surrounding data sharing in medical data sets also hinder research and model development, making it difficult to collect a rich data set. The proposed FedCBMIR distributes the model to collaborative centers for training without sharing the data set, resulting in shorter training times than local training. FedCBMIR was evaluated in two experiments with three scenarios on BreaKHis and Camelyon17 (CAM17). The study shows that the FedCBMIR method increases the F1-Score (F1S) of each client to 98%, 96%, 94%, and 97% in the BreaKHis experiment with a generalized model of four magnifications and does so in 6.30 hours less time than total local training. FedCBMIR also achieves 98% accuracy with CAM17 in 2.49 hours less training time than local training, demonstrating that our FedCBMIR is both fast and accurate for both pathologists and engineers. In addition, our FedCBMIR provides similar images with higher magnification for non-developed countries where participate in the worldwide FedCBMIR with developed countries to facilitate mitosis measuring in breast cancer diagnosis. We evaluate this scenario by scattering BreaKHis into four centers with different magnifications.

Jiahui Geng, Zongxiong Chen, Yuandou Wang et al.

Dataset distillation is attracting more attention in machine learning as training sets continue to grow and the cost of training state-of-the-art models becomes increasingly high. By synthesizing datasets with high information density, dataset distillation offers a range of potential applications, including support for continual learning, neural architecture search, and privacy protection. Despite recent advances, we lack a holistic understanding of the approaches and applications. Our survey aims to bridge this gap by first proposing a taxonomy of dataset distillation, characterizing existing approaches, and then systematically reviewing the data modalities, and related applications. In addition, we summarize the challenges and discuss future directions for this field of research.

Zeshun Shi, Cees de Laat, Paola Grosso et al.

In recent years, blockchain has gained widespread attention as an emerging technology for decentralization, transparency, and immutability in advancing online activities over public networks. As an essential market process, auctions have been well studied and applied in many business fields due to their efficiency and contributions to fair trade. Complementary features between blockchain and auction models trigger a great potential for research and innovation. On the one hand, the decentralized nature of blockchain can provide a trustworthy, secure, and cost-effective mechanism to manage the auction process; on the other hand, auction models can be utilized to design incentive and consensus protocols in blockchain architectures. These opportunities have attracted enormous research and innovation activities in both academia and industry; however, there is a lack of an in-depth review of existing solutions and achievements. In this paper, we conduct a comprehensive state-of-the-art survey of these two research topics. We review the existing solutions for integrating blockchain and auction models, with some application-oriented taxonomies generated. Additionally, we highlight some open research challenges and future directions towards integrated blockchain-auction models.