Mauricio A Álvarez

Matthew Lyon, Paul Armitage, Mauricio A Álvarez

Diffusion MRI (dMRI) is a widely used imaging modality, but requires long scanning times to acquire high resolution datasets. By leveraging the unique geometry present within this domain, we present a novel approach to dMRI angular super-resolution that extends upon the parametric continuous convolution (PCConv) framework. We introduce several additions to the operation including a Fourier feature mapping, global coordinates, and domain specific context. Using this framework, we build a fully parametric continuous convolution network (PCCNN) and compare against existing models. We demonstrate the PCCNN performs competitively while using significantly less parameters. Moreover, we show that this formulation generalises well to clinically relevant downstream analyses such as fixel-based analysis, and neurite orientation dispersion and density imaging.

Xiaoyu Jiang, Xinxing Shi, Sokratia Georgaka et al.

Multi-Output Gaussian Processes (MOGPs) provide a principled probabilistic framework for modelling correlated outputs but face scalability bottlenecks when applied to datasets with high-dimensional output spaces. To maintain tractability, existing methods typically resort to restrictive assumptions, such as employing low-rank or sum-of-separable kernels, which can limit expressiveness. We propose the Transformed Latent Variable MOGP (T-LVMOGP), a novel framework that scales MOGPs to a massive number of outputs while preserving the capacity to capture meaningful inter-output dependencies. T-LVMOGP constructs a flexible multi-output deep kernel by mapping inputs and output-specific latent variables into an embedding space using a Lipschitz-regularised neural network. Combined with stochastic variational inference, our model effectively scales to high-dimensional output settings. Across diverse benchmarks, including climate modelling with over 10,000 outputs and zero-inflated spatial transcriptomics data, T-LVMOGP outperforms baselines in both predictive accuracy and computational efficiency.

Qiyu Wei, Haowei Wang, Zirui Cao et al.

Bayesian optimization (BO) is an effective technique for black-box optimization. However, its applicability is typically limited to moderate-budget problems due to the cubic complexity of fitting the Gaussian process (GP) surrogate model. In large-budget scenarios, directly employing the standard GP model faces significant challenges in computational time and resource requirements. In this paper, we propose a novel approach, gradient-based sample selection Bayesian Optimization (GSSBO), to enhance the computational efficiency of BO. The GP model is constructed on a selected set of samples instead of the whole dataset. These samples are selected by leveraging gradient information to remove redundancy while preserving diversity and representativeness. We provide a theoretical analysis of the gradient-based sample selection strategy and obtain explicit sublinear regret bounds for our proposed framework. Extensive experiments on synthetic and real-world tasks demonstrate that our approach significantly reduces the computational cost of GP fitting in BO while maintaining optimization performance comparable to baseline methods.

Wil O C Ward, Mauricio A Álvarez

This paper introduces a method to approximate Gaussian process regression by representing the problem as a stochastic differential equation and using variational inference to approximate solutions. The approximations are compared with full GP regression and generated paths are demonstrated to be indistinguishable from GP samples. We show that the approach extends easily to non-linear dynamics and discuss extensions to which the approach can be easily applied.