Huihui Fang

Zhiyuan Yang, Bo Zhang, Yufei Shi et al.

Glaucoma is one of the leading causes of vision impairment. Digital imaging techniques, such as color fundus photography (CFP) and optical coherence tomography (OCT), provide quantitative and noninvasive methods for glaucoma diagnosis. Recently, in the field of computer-aided glaucoma diagnosis, multi-modality methods that integrate the CFP and OCT modalities have achieved greater diagnostic accuracy compared to single-modality methods. However, it remains challenging to extract reliable features due to the high similarity of medical images and the unbalanced multi-modal data distribution. Moreover, existing methods overlook the uncertainty estimation of different modalities, leading to unreliable predictions. To address these challenges, we propose a novel framework, namely ETSCL, which consists of a contrastive feature extraction stage and a decision-level fusion stage. Specifically, the supervised contrastive loss is employed to enhance the discriminative power in the feature extraction process, resulting in more effective features. In addition, we utilize the Frangi vesselness algorithm as a preprocessing step to incorporate vessel information to assist in the prediction. In the decision-level fusion stage, an evidence theory-based multi-modality classifier is employed to combine multi-source information with uncertainty estimation. Extensive experiments demonstrate that our method achieves state-of-the-art performance. The code is available at \url{https://github.com/master-Shix/ETSCL}.

Chengzhou Yu, Huihui Fang, Hongqiu Wang et al.

Fundus imaging is a critical tool in ophthalmology, with different imaging modalities offering unique advantages. For instance, fundus fluorescein angiography (FFA) can accurately identify eye diseases. However, traditional invasive FFA involves the injection of sodium fluorescein, which can cause discomfort and risks. Generating corresponding FFA images from non-invasive fundus images holds significant practical value but also presents challenges. First, limited datasets constrain the performance and effectiveness of models. Second, previous studies have primarily focused on generating FFA for single diseases or single modalities, often resulting in poor performance for patients with various ophthalmic conditions. To address these issues, we propose a novel latent diffusion model-based framework, Diffusion, which introduces a fine-tuning protocol to overcome the challenge of limited medical data and unleash the generative capabilities of diffusion models. Furthermore, we designed a new approach to tackle the challenges of generating across different modalities and disease types. On limited datasets, our framework achieves state-of-the-art results compared to existing methods, offering significant potential to enhance ophthalmic diagnostics and patient care. Our code will be released soon to support further research in this field.

Huihui Fang, Fei Li, Huazhu Fu et al.

Age-related macular degeneration (AMD) is the leading cause of visual impairment among elderly in the world. Early detection of AMD is of great importance, as the vision loss caused by this disease is irreversible and permanent. Color fundus photography is the most cost-effective imaging modality to screen for retinal disorders. Cutting edge deep learning based algorithms have been recently developed for automatically detecting AMD from fundus images. However, there are still lack of a comprehensive annotated dataset and standard evaluation benchmarks. To deal with this issue, we set up the Automatic Detection challenge on Age-related Macular degeneration (ADAM), which was held as a satellite event of the ISBI 2020 conference. The ADAM challenge consisted of four tasks which cover the main aspects of detecting and characterizing AMD from fundus images, including detection of AMD, detection and segmentation of optic disc, localization of fovea, and detection and segmentation of lesions. As part of the challenge, we have released a comprehensive dataset of 1200 fundus images with AMD diagnostic labels, pixel-wise segmentation masks for both optic disc and AMD-related lesions (drusen, exudates, hemorrhages and scars, among others), as well as the coordinates corresponding to the location of the macular fovea. A uniform evaluation framework has been built to make a fair comparison of different models using this dataset. During the challenge, 610 results were submitted for online evaluation, with 11 teams finally participating in the onsite challenge. This paper introduces the challenge, the dataset and the evaluation methods, as well as summarizes the participating methods and analyzes their results for each task. In particular, we observed that the ensembling strategy and the incorporation of clinical domain knowledge were the key to improve the performance of the deep learning models.

Huihui Fang, Jian Yang, Jianjun Zhu et al.

Vascular tracking of angiographic image sequences is one of the most clinically important tasks in the diagnostic assessment and interventional guidance of cardiac disease. However, this task can be challenging to accomplish because of unsatisfactory angiography image quality and complex vascular structures. Thus, this study proposed a new greedy graph search-based method for vascular tracking. Each vascular branch is separated from the vasculature and is tracked independently. Then, all branches are combined using topology optimization, thereby resulting in complete vasculature tracking. A gray-based image registration method was applied to determine the tracking range, and the deformation field between two consecutive frames was calculated. The vascular branch was described using a vascular centerline extraction method with multi-probability fusion-based topology optimization. We introduce an undirected acyclic graph establishment technique. A greedy search method was proposed to acquire all possible paths in the graph that might match the tracked vascular branch. The final tracking result was selected by branch matching using dynamic time warping with a DAISY descriptor. The solution to the problem reflected both the spatial and textural information between successive frames. Experimental results demonstrated that the proposed method was effective and robust for vascular tracking, attaining a F1 score of 0.89 on a single branch dataset and 0.88 on a vessel tree dataset. This approach provided a universal solution to address the problem of filamentary structure tracking.