MUSTANG: Multi-Stain Self-Attention Graph Multiple Instance Learning Pipeline for Histopathology Whole Slide ImagesAmaya Gallagher-Syed, Luca Rossi, Felice Rivellese et al.
Whole Slide Images (WSIs) present a challenging computer vision task due to their gigapixel size and presence of numerous artefacts. Yet they are a valuable resource for patient diagnosis and stratification, often representing the gold standard for diagnostic tasks. Real-world clinical datasets tend to come as sets of heterogeneous WSIs with labels present at the patient-level, with poor to no annotations. Weakly supervised attention-based multiple instance learning approaches have been developed in recent years to address these challenges, but can fail to resolve both long and short-range dependencies. Here we propose an end-to-end multi-stain self-attention graph (MUSTANG) multiple instance learning pipeline, which is designed to solve a weakly-supervised gigapixel multi-image classification task, where the label is assigned at the patient-level, but no slide-level labels or region annotations are available. The pipeline uses a self-attention based approach by restricting the operations to a highly sparse k-Nearest Neighbour Graph of embedded WSI patches based on the Euclidean distance. We show this approach achieves a state-of-the-art F1-score/AUC of 0.89/0.92, outperforming the widely used CLAM model. Our approach is highly modular and can easily be modified to suit different clinical datasets, as it only requires a patient-level label without annotations and accepts WSI sets of different sizes, as the graphs can be of varying sizes and structures. The source code can be found at https://github.com/AmayaGS/MUSTANG.
11.6CVMar 7, 2023
Graph Neural Networks in Vision-Language Image Understanding: A SurveyHenry Senior, Gregory Slabaugh, Shanxin Yuan et al.
2D image understanding is a complex problem within computer vision, but it holds the key to providing human-level scene comprehension. It goes further than identifying the objects in an image, and instead, it attempts to understand the scene. Solutions to this problem form the underpinning of a range of tasks, including image captioning, visual question answering (VQA), and image retrieval. Graphs provide a natural way to represent the relational arrangement between objects in an image, and thus, in recent years graph neural networks (GNNs) have become a standard component of many 2D image understanding pipelines, becoming a core architectural component, especially in the VQA group of tasks. In this survey, we review this rapidly evolving field and we provide a taxonomy of graph types used in 2D image understanding approaches, a comprehensive list of the GNN models used in this domain, and a roadmap of future potential developments. To the best of our knowledge, this is the first comprehensive survey that covers image captioning, visual question answering, and image retrieval techniques that focus on using GNNs as the main part of their architecture.
1.4LGJan 21
LoRAP: Low-Rank Aggregation Prompting for Quantized Graph Neural Networks TrainingChenyu Liu, Haige Li, Luca Rossi
Graph Neural Networks (GNNs) are neural networks that aim to process graph data, capturing the relationships and interactions between nodes using the message-passing mechanism. GNN quantization has emerged as a promising approach for reducing model size and accelerating inference in resource-constrained environments. Compared to quantization in LLMs, quantizing graph features is more emphasized in GNNs. Inspired by the above, we propose to leverage prompt learning, which manipulates the input data, to improve the performance of quantization-aware training (QAT) for GNNs. To mitigate the issue that prompting the node features alone can only make part of the quantized aggregation result optimal, we introduce Low-Rank Aggregation Prompting (LoRAP), which injects lightweight, input-dependent prompts into each aggregated feature to optimize the results of quantized aggregations. Extensive evaluations on 4 leading QAT frameworks over 9 graph datasets demonstrate that LoRAP consistently enhances the performance of low-bit quantized GNNs while introducing a minimal computational overhead.
3.6CVMar 11, 2025
SuperCap: Multi-resolution Superpixel-based Image CaptioningHenry Senior, Luca Rossi, Gregory Slabaugh et al.
It has been a longstanding goal within image captioning to move beyond a dependence on object detection. We investigate using superpixels coupled with Vision Language Models (VLMs) to bridge the gap between detector-based captioning architectures and those that solely pretrain on large datasets. Our novel superpixel approach ensures that the model receives object-like features whilst the use of VLMs provides our model with open set object understanding. Furthermore, we extend our architecture to make use of multi-resolution inputs, allowing our model to view images in different levels of detail, and use an attention mechanism to determine which parts are most relevant to the caption. We demonstrate our model's performance with multiple VLMs and through a range of ablations detailing the impact of different architectural choices. Our full model achieves a competitive CIDEr score of $136.9$ on the COCO Karpathy split.
12.0CVJul 17, 2020
GMNet: Graph Matching Network for Large Scale Part Semantic Segmentation in the WildUmberto Michieli, Edoardo Borsato, Luca Rossi et al.
The semantic segmentation of parts of objects in the wild is a challenging task in which multiple instances of objects and multiple parts within those objects must be detected in the scene. This problem remains nowadays very marginally explored, despite its fundamental importance towards detailed object understanding. In this work, we propose a novel framework combining higher object-level context conditioning and part-level spatial relationships to address the task. To tackle object-level ambiguity, a class-conditioning module is introduced to retain class-level semantics when learning parts-level semantics. In this way, mid-level features carry also this information prior to the decoding stage. To tackle part-level ambiguity and localization we propose a novel adjacency graph-based module that aims at matching the relative spatial relationships between ground truth and predicted parts. The experimental evaluation on the Pascal-Part dataset shows that we achieve state-of-the-art results on this task.
12.2CRMar 22, 2015
Privacy and the City: User Identification and Location Semantics in Location-Based Social NetworksLuca Rossi, Matthew J. Williams, Christoph Stich et al.
With the advent of GPS enabled smartphones, an increasing number of users is actively sharing their location through a variety of applications and services. Along with the continuing growth of Location-Based Social Networks (LBSNs), security experts have increasingly warned the public of the dangers of exposing sensitive information such as personal location data. Most importantly, in addition to the geographical coordinates of the user's location, LBSNs allow easy access to an additional set of characteristics of that location, such as the venue type or popularity. In this paper, we investigate the role of location semantics in the identification of LBSN users. We simulate a scenario in which the attacker's goal is to reveal the identity of a set of LBSN users by observing their check-in activity. We then propose to answer the following question: what are the types of venues that a malicious user has to monitor to maximize the probability of success? Conversely, when should a user decide whether to make his/her check-in to a location public or not? We perform our study on more than 1 million check-ins distributed over 17 urban regions of the United States. Our analysis shows that different types of venues display different discriminative power in terms of user identity, with most of the venues in the "Residence" category providing the highest re-identification success across the urban regions. Interestingly, we also find that users with a high entropy of their check-ins distribution are not necessarily the hardest to identify, suggesting that it is the collective behaviour of the users' population that determines the complexity of the identification task, rather than the individual behaviour.
17.9CRJan 27, 2015
Spatio-Temporal Techniques for User Identification by means of GPS Mobility DataLuca Rossi, James Walker, Mirco Musolesi
One of the greatest concerns related to the popularity of GPS-enabled devices and applications is the increasing availability of the personal location information generated by them and shared with application and service providers. Moreover, people tend to have regular routines and be characterized by a set of "significant places", thus making it possible to identify a user from his/her mobility data. In this paper we present a series of techniques for identifying individuals from their GPS movements. More specifically, we study the uniqueness of GPS information for three popular datasets, and we provide a detailed analysis of the discriminatory power of speed, direction and distance of travel. Most importantly, we present a simple yet effective technique for the identification of users from location information that are not included in the original dataset used for training, thus raising important privacy concerns for the management of location datasets.