Junyu Luo

Kimi Team, Tongtong Bai, Yifan Bai et al.

We introduce Kimi K2.5, an open-source multimodal agentic model designed to advance general agentic intelligence. K2.5 emphasizes the joint optimization of text and vision so that two modalities enhance each other. This includes a series of techniques such as joint text-vision pre-training, zero-vision SFT, and joint text-vision reinforcement learning. Building on this multimodal foundation, K2.5 introduces Agent Swarm, a self-directed parallel agent orchestration framework that dynamically decomposes complex tasks into heterogeneous sub-problems and executes them concurrently. Extensive evaluations show that Kimi K2.5 achieves state-of-the-art results across various domains including coding, vision, reasoning, and agentic tasks. Agent Swarm also reduces latency by up to $4.5\times$ over single-agent baselines. We release the post-trained Kimi K2.5 model checkpoint to facilitate future research and real-world applications of agentic intelligence.

Pengyun Wang, Yadi Cao, Chris Russell et al. · pku

Graph domain adaptation has recently enabled knowledge transfer across different graphs. However, without the semantic information on target graphs, the performance on target graphs is still far from satisfactory. To address the issue, we study the problem of active graph domain adaptation, which selects a small quantitative of informative nodes on the target graph for extra annotation. This problem is highly challenging due to the complicated topological relationships and the distribution discrepancy across graphs. In this paper, we propose a novel approach named Dual Consistency Delving with Topological Uncertainty (DELTA) for active graph domain adaptation. Our DELTA consists of an edge-oriented graph subnetwork and a path-oriented graph subnetwork, which can explore topological semantics from complementary perspectives. In particular, our edge-oriented graph subnetwork utilizes the message passing mechanism to learn neighborhood information, while our path-oriented graph subnetwork explores high-order relationships from sub-structures. To jointly learn from two subnetworks, we roughly select informative candidate nodes with the consideration of consistency across two subnetworks. Then, we aggregate local semantics from its K-hop subgraph based on node degrees for topological uncertainty estimation. To overcome potential distribution shifts, we compare target nodes and their corresponding source nodes for discrepancy scores as an additional component for fine selection. Extensive experiments on benchmark datasets demonstrate that DELTA outperforms various state-of-the-art approaches. The code implementation of DELTA is available at https://github.com/goose315/DELTA.

Junyu Luo, Jiahui Fu, Xianghao Kong et al. · pku

3D visual grounding aims to locate the referred target object in 3D point cloud scenes according to a free-form language description. Previous methods mostly follow a two-stage paradigm, i.e., language-irrelevant detection and cross-modal matching, which is limited by the isolated architecture. In such a paradigm, the detector needs to sample keypoints from raw point clouds due to the inherent properties of 3D point clouds (irregular and large-scale), to generate the corresponding object proposal for each keypoint. However, sparse proposals may leave out the target in detection, while dense proposals may confuse the matching model. Moreover, the language-irrelevant detection stage can only sample a small proportion of keypoints on the target, deteriorating the target prediction. In this paper, we propose a 3D Single-Stage Referred Point Progressive Selection (3D-SPS) method, which progressively selects keypoints with the guidance of language and directly locates the target. Specifically, we propose a Description-aware Keypoint Sampling (DKS) module to coarsely focus on the points of language-relevant objects, which are significant clues for grounding. Besides, we devise a Target-oriented Progressive Mining (TPM) module to finely concentrate on the points of the target, which is enabled by progressive intra-modal relation modeling and inter-modal target mining. 3D-SPS bridges the gap between detection and matching in the 3D visual grounding task, localizing the target at a single stage. Experiments demonstrate that 3D-SPS achieves state-of-the-art performance on both ScanRefer and Nr3D/Sr3D datasets.

Junyu Luo, Zhiping Xiao, Yifan Wang et al. · pku

Graph neural networks (GNNs) have achieved impressive performance in graph domain adaptation. However, extensive source graphs could be unavailable in real-world scenarios due to privacy and storage concerns. To this end, we investigate an underexplored yet practical problem of source-free graph domain adaptation, which transfers knowledge from source models instead of source graphs to a target domain. To solve this problem, we introduce a novel GNN-based approach called Rank and Align (RNA), which ranks graph similarities with spectral seriation for robust semantics learning, and aligns inharmonic graphs with harmonic graphs which close to the source domain for subgraph extraction. In particular, to overcome label scarcity, we employ the spectral seriation algorithm to infer the robust pairwise rankings, which can guide semantic learning using a similarity learning objective. To depict distribution shifts, we utilize spectral clustering and the silhouette coefficient to detect harmonic graphs, which the source model can easily classify. To reduce potential domain discrepancy, we extract domain-invariant subgraphs from inharmonic graphs by an adversarial edge sampling process, which guides the invariant learning of GNNs. Extensive experiments on several benchmark datasets demonstrate the effectiveness of our proposed RNA.

Taian Guo, Haiyang Shen, Junyu Luo et al.

LLMs have demonstrated significant potential in quantitative finance by processing vast unstructured data to emulate human-like analytical workflows. However, current LLM-based methods primarily follow either an Asset-Centric paradigm focused on individual stock prediction or a Market-Centric approach for portfolio allocation, often remaining agnostic to the underlying reasoning that drives market movements. In this paper, we propose a Logic-Oriented perspective, modeling the financial market as a dynamic, evolutionary ecosystem of competing investment narratives, termed Modes of Thought. To operationalize this view, we introduce MEME (Modeling the Evolutionary Modes of Financial Markets), designed to reconstruct market dynamics through the lens of evolving logics. MEME employs a multi-agent extraction module to transform noisy data into high-fidelity Investment Arguments and utilizes Gaussian Mixture Modeling to uncover latent consensus within a semantic space. To model semantic drift among different market conditions, we also implement a temporal evaluation and alignment mechanism to track the lifecycle and historical profitability of these modes. By prioritizing enduring market wisdom over transient anomalies, MEME ensures that portfolio construction is guided by robust reasoning. Extensive experiments on three heterogeneous Chinese stock pools from 2023 to 2025 demonstrate that MEME consistently outperforms seven SOTA baselines. Further ablation studies, sensitivity analysis, lifecycle case study and cost analysis validate MEME's capacity to identify and adapt to the evolving consensus of financial markets. Our implementation can be found at https://github.com/gta0804/MEME.

Yiyang Gu, Junwei Yang, Junyu Luo et al.

Large language models (LLMs) are increasingly applied to scientific research, yet existing evaluations often fail to reflect the fine-grained capabilities required in practice. Most benchmarks are manually curated or domain-generic, limiting scalability and alignment with real scientific use cases. In this paper, we propose a new framework named SciCustom to address the problem. It enables the custom construction of benchmarks from large-scale scientific data to evaluate application-specific scientific capabilities in LLMs. SciCustom first organizes scientific knowledge into ontology-grounded knowledge units with controlled granularity and trains a tagger to map large-scale data instances into this knowledge space. Given a custom requirement, relevant knowledge units are identified via voting-based multi-model consensus. These units enable relevance-aware benchmark retrieval via binary search, followed by proxy subset selection and data-grounded benchmark generation for efficient evaluation. Experiments in chemistry and healthcare demonstrate that SciCustom reveals fine-grained differences in LLM scientific capabilities that standard benchmarks overlook, while requiring neither expert annotation nor synthetic question generation. This work provides a scalable and application-aware foundation for benchmarking scientific capabilities in LLMs. The source code is available at https://github.com/yjwtheonly/SciCustom.

Taian Guo, Haiyang Shen, Junyu Luo et al.

Extracting signals through alpha factor mining is a fundamental challenge in quantitative finance. Existing automated methods primarily follow two paradigms: Decoupled Factor Generation, which treats factor discovery as isolated events, and Iterative Factor Evolution, which focuses on local parent-child refinements. However, both paradigms lack a global structural view, often treating factor pools as unstructured collections or fragmented chains, which leads to redundant search and limited diversity. To address these limitations, we introduce AlphaPROBE (Alpha Mining via Principled Retrieval and On-graph Biased Evolution), a framework that reframes alpha mining as the strategic navigation of a Directed Acyclic Graph (DAG). By modeling factors as nodes and evolutionary links as edges, AlphaPROBE treats the factor pool as a dynamic, interconnected ecosystem. The framework consists of two core components: a Bayesian Factor Retriever that identifies high-potential seeds by balancing exploitation and exploration through a posterior probability model, and a DAG-aware Factor Generator that leverages the full ancestral trace of factors to produce context-aware, nonredundant optimizations. Extensive experiments on three major Chinese stock market datasets against 8 competitive baselines demonstrate that AlphaPROBE significantly gains enhanced performance in predictive accuracy, return stability and training efficiency. Our results confirm that leveraging global evolutionary topology is essential for efficient and robust automated alpha discovery. We have open-sourced our implementation at https://github.com/gta0804/AlphaPROBE.

Zhiyin Yu, Yuchen Mou, Juncheng Yan et al. · pku

Reinforcement learning (RL) has emerged as a powerful post-training paradigm for enhancing the reasoning capabilities of large language models (LLMs). However, reinforcement learning for LLMs faces substantial data scarcity challenges, including the limited availability of high-quality external supervision and the constrained volume of model-generated experience. These limitations make data-efficient reinforcement learning a critical research direction. In this survey, we present the first systematic review of reinforcement learning for LLMs under data scarcity. We propose a bottom-up hierarchical framework built around three complementary perspectives: the data-centric perspective, the training-centric perspective, and the framework-centric perspective. We develop a taxonomy of existing methods, summarize representative approaches in each category, and analyze their strengths and limitations. Our taxonomy aims to provide a clear conceptual foundation for understanding the design space of data-efficient RL for LLMs and to guide researchers working in this emerging area. We hope this survey offers a comprehensive roadmap for future research and inspires new directions toward more efficient and scalable reinforcement learning post-training for LLMs.

Junyu Luo, Weizhi Zhang, Ye Yuan et al. · pku

The era of intelligent agents is upon us, driven by revolutionary advancements in large language models. Large Language Model (LLM) agents, with goal-driven behaviors and dynamic adaptation capabilities, potentially represent a critical pathway toward artificial general intelligence. This survey systematically deconstructs LLM agent systems through a methodology-centered taxonomy, linking architectural foundations, collaboration mechanisms, and evolutionary pathways. We unify fragmented research threads by revealing fundamental connections between agent design principles and their emergent behaviors in complex environments. Our work provides a unified architectural perspective, examining how agents are constructed, how they collaborate, and how they evolve over time, while also addressing evaluation methodologies, tool applications, practical challenges, and diverse application domains. By surveying the latest developments in this rapidly evolving field, we offer researchers a structured taxonomy for understanding LLM agents and identify promising directions for future research. The collection is available at https://github.com/luo-junyu/Awesome-Agent-Papers.

Xiaochen Wang, Junyu Luo, Jiaqi Wang et al.

Pretraining has proven to be a powerful technique in natural language processing (NLP), exhibiting remarkable success in various NLP downstream tasks. However, in the medical domain, existing pretrained models on electronic health records (EHR) fail to capture the hierarchical nature of EHR data, limiting their generalization capability across diverse downstream tasks using a single pretrained model. To tackle this challenge, this paper introduces a novel, general, and unified pretraining framework called MEDHMP, specifically designed for hierarchically multimodal EHR data. The effectiveness of the proposed MEDHMP is demonstrated through experimental results on eight downstream tasks spanning three levels. Comparisons against eighteen baselines further highlight the efficacy of our approach.

Junyu Luo, Cao Xiao, Fenglong Ma

The prevalent use of large language models (LLMs) in various domains has drawn attention to the issue of "hallucination," which refers to instances where LLMs generate factually inaccurate or ungrounded information. Existing techniques for hallucination detection in language assistants rely on intricate fuzzy, specific free-language-based chain of thought (CoT) techniques or parameter-based methods that suffer from interpretability issues. Additionally, the methods that identify hallucinations post-generation could not prevent their occurrence and suffer from inconsistent performance due to the influence of the instruction format and model style. In this paper, we introduce a novel pre-detection self-evaluation technique, referred to as SELF-FAMILIARITY, which focuses on evaluating the model's familiarity with the concepts present in the input instruction and withholding the generation of response in case of unfamiliar concepts. This approach emulates the human ability to refrain from responding to unfamiliar topics, thus reducing hallucinations. We validate SELF-FAMILIARITY across four different large language models, demonstrating consistently superior performance compared to existing techniques. Our findings propose a significant shift towards preemptive strategies for hallucination mitigation in LLM assistants, promising improvements in reliability, applicability, and interpretability.

Zhizhuo Kou, Holam Yu, Junyu Luo et al.

We present a novel three-stage framework leveraging Large Language Models (LLMs) within a risk-aware multi-agent system for automate strategy finding in quantitative finance. Our approach addresses the brittleness of traditional deep learning models in financial applications by: employing prompt-engineered LLMs to generate executable alpha factor candidates across diverse financial data, implementing multimodal agent-based evaluation that filters factors based on market status, predictive quality while maintaining category balance, and deploying dynamic weight optimization that adapts to market conditions. Experimental results demonstrate the robust performance of the strategy in Chinese & US market regimes compared to established benchmarks. Our work extends LLMs capabilities to quantitative trading, providing a scalable architecture for financial signal extraction and portfolio construction. The overall framework significantly outperforms all benchmarks with 53.17% cumulative return on SSE50 (Jan 2023 to Jan 2024), demonstrating superior risk-adjusted performance and downside protection on the market.

Weizhi Zhang, Yangning Li, Yuanchen Bei et al. · pku

Information retrieval is a cornerstone of modern knowledge acquisition, enabling billions of queries each day across diverse domains. However, traditional keyword-based search engines are increasingly inadequate for handling complex, multi-step information needs. Our position is that Large Language Models (LLMs), endowed with reasoning and agentic capabilities, are ushering in a new paradigm termed Agentic Deep Research. These systems transcend conventional information search techniques by tightly integrating autonomous reasoning, iterative retrieval, and information synthesis into a dynamic feedback loop. We trace the evolution from static web search to interactive, agent-based systems that plan, explore, and learn. We also introduce a test-time scaling law to formalize the impact of computational depth on reasoning and search. Supported by benchmark results and the rise of open-source implementations, we demonstrate that Agentic Deep Research not only significantly outperforms existing approaches, but is also poised to become the dominant paradigm for future information seeking. All the related resources, including industry products, research papers, benchmark datasets, and open-source implementations, are collected for the community in https://github.com/DavidZWZ/Awesome-Deep-Research.

Junyu Luo, Zhizhuo Kou, Liming Yang et al. · pku

Multimodal Large Language Models (MLLMs) have experienced rapid development in recent years. However, in the financial domain, there is a notable lack of effective and specialized multimodal evaluation datasets. To advance the development of MLLMs in the finance domain, we introduce FinMME, encompassing more than 11,000 high-quality financial research samples across 18 financial domains and 6 asset classes, featuring 10 major chart types and 21 subtypes. We ensure data quality through 20 annotators and carefully designed validation mechanisms. Additionally, we develop FinScore, an evaluation system incorporating hallucination penalties and multi-dimensional capability assessment to provide an unbiased evaluation. Extensive experimental results demonstrate that even state-of-the-art models like GPT-4o exhibit unsatisfactory performance on FinMME, highlighting its challenging nature. The benchmark exhibits high robustness with prediction variations under different prompts remaining below 1%, demonstrating superior reliability compared to existing datasets. Our dataset and evaluation protocol are available at https://huggingface.co/datasets/luojunyu/FinMME and https://github.com/luo-junyu/FinMME.

Yangning Li, Weizhi Zhang, Yuyao Yang et al. · pku

Retrieval-Augmented Generation (RAG) lifts the factuality of Large Language Models (LLMs) by injecting external knowledge, yet it falls short on problems that demand multi-step inference; conversely, purely reasoning-oriented approaches often hallucinate or mis-ground facts. This survey synthesizes both strands under a unified reasoning-retrieval perspective. We first map how advanced reasoning optimizes each stage of RAG (Reasoning-Enhanced RAG). Then, we show how retrieved knowledge of different type supply missing premises and expand context for complex inference (RAG-Enhanced Reasoning). Finally, we spotlight emerging Synergized RAG-Reasoning frameworks, where (agentic) LLMs iteratively interleave search and reasoning to achieve state-of-the-art performance across knowledge-intensive benchmarks. We categorize methods, datasets, and open challenges, and outline research avenues toward deeper RAG-Reasoning systems that are more effective, multimodally-adaptive, trustworthy, and human-centric. The collection is available at https://github.com/DavidZWZ/Awesome-RAG-Reasoning.

Liming Yang, Junyu Luo, Xuanzhe Liu et al.

Large language model (LLM)-based multi-agent systems have emerged as a powerful paradigm for enabling autonomous agents to solve complex tasks. As these systems scale in complexity, cost becomes an important consideration for practical deployment. However, existing work rarely addresses how to structure multi-agent systems under explicit budget constraints. In this paper, we propose BAMAS, a novel approach for building multi-agent systems with budget awareness. BAMAS first selects an optimal set of LLMs by formulating and solving an Integer Linear Programming problem that balances performance and cost. It then determines how these LLMs should collaborate by leveraging a reinforcement learning-based method to select the interaction topology. Finally, the system is instantiated and executed based on the selected agents and their collaboration topology. We evaluate BAMAS on three representative tasks and compare it with state-of-the-art agent construction methods. Results show that BAMAS achieves comparable performance while reducing cost by up to 86%.

Taian Guo, Haiyang Shen, JinSheng Huang et al. · pku

The application of LLM-based agents in financial investment has shown significant promise, yet existing approaches often require intermediate steps like predicting individual stock movements or rely on predefined, static workflows. These limitations restrict their adaptability and effectiveness in constructing optimal portfolios. In this paper, we introduce the Multi-Agent Scaling Simulation (MASS), a novel framework that leverages multi-agent simulation for direct, end-to-end portfolio construction. At its core, MASS employs a backward optimization process to dynamically learn the optimal distribution of heterogeneous agents, enabling the system to adapt to evolving market regimes. A key finding enabled by our framework is the exploration of the scaling effect for portfolio construction: we demonstrate that as the number of agents increases exponentially (up to 512), the aggregated decisions yield progressively higher excess returns. Extensive experiments on a challenging, self-collected dataset from the 2023 Chinese A-share market show that MASS consistently outperforms seven state-of-the-art baselines. Further backtesting, stability analyses and the experiment on data leakage concerns validate its enhanced profitability and robustness. We have open-sourced our code, dataset, and training snapshots at https://github.com/gta0804/MASS/ to foster further research.

Junyu Luo, Bohan Wu, Xiao Luo et al. · pku

Post-training of Large Language Models (LLMs) is crucial for unlocking their task generalization potential and domain-specific capabilities. However, the current LLM post-training paradigm faces significant data challenges, including the high costs of manual annotation and diminishing marginal returns on data scales. Therefore, achieving data-efficient post-training has become a key research question. In this paper, we present the first systematic survey of data-efficient LLM post-training from a data-centric perspective. We propose a taxonomy of data-efficient LLM post-training methods, covering data selection, data quality enhancement, synthetic data generation, data distillation and compression, and self-evolving data ecosystems. We summarize representative approaches in each category and outline future research directions. By examining the challenges in data-efficient LLM post-training, we highlight open problems and propose potential research avenues. We hope our work inspires further exploration into maximizing the potential of data utilization in large-scale model training. Paper List: https://github.com/luo-junyu/Awesome-Data-Efficient-LLM

Jingyang Yuan, Huazuo Gao, Damai Dai et al. · pku

Long-context modeling is crucial for next-generation language models, yet the high computational cost of standard attention mechanisms poses significant computational challenges. Sparse attention offers a promising direction for improving efficiency while maintaining model capabilities. We present NSA, a Natively trainable Sparse Attention mechanism that integrates algorithmic innovations with hardware-aligned optimizations to achieve efficient long-context modeling. NSA employs a dynamic hierarchical sparse strategy, combining coarse-grained token compression with fine-grained token selection to preserve both global context awareness and local precision. Our approach advances sparse attention design with two key innovations: (1) We achieve substantial speedups through arithmetic intensity-balanced algorithm design, with implementation optimizations for modern hardware. (2) We enable end-to-end training, reducing pretraining computation without sacrificing model performance. As shown in Figure 1, experiments show the model pretrained with NSA maintains or exceeds Full Attention models across general benchmarks, long-context tasks, and instruction-based reasoning. Meanwhile, NSA achieves substantial speedups over Full Attention on 64k-length sequences across decoding, forward propagation, and backward propagation, validating its efficiency throughout the model lifecycle.

Pengyun Wang, Junyu Luo, Yanxin Shen et al.

Graph pooling has gained attention for its ability to obtain effective node and graph representations for various downstream tasks. Despite the recent surge in graph pooling approaches, there is a lack of standardized experimental settings and fair benchmarks to evaluate their performance. To address this issue, we have constructed a comprehensive benchmark that includes 17 graph pooling methods and 28 different graph datasets. This benchmark systematically assesses the performance of graph pooling methods in three dimensions, i.e., effectiveness, robustness, and generalizability. We first evaluate the performance of these graph pooling approaches across different tasks including graph classification, graph regression and node classification. Then, we investigate their performance under potential noise attacks and out-of-distribution shifts in real-world scenarios. We also involve detailed efficiency analysis, backbone analysis, parameter analysis and visualization to provide more evidence. Extensive experiments validate the strong capability and applicability of graph pooling approaches in various scenarios, which can provide valuable insights and guidance for deep geometric learning research. The source code of our benchmark is available at https://github.com/goose315/Graph_Pooling_Benchmark.

Wei Ju, Yifan Wang, Yifang Qin et al. · pku

In recent years, deep learning on graphs has achieved remarkable success in various domains. However, the reliance on annotated graph data remains a significant bottleneck due to its prohibitive cost and time-intensive nature. To address this challenge, self-supervised learning (SSL) on graphs has gained increasing attention and has made significant progress. SSL enables machine learning models to produce informative representations from unlabeled graph data, reducing the reliance on expensive labeled data. While SSL on graphs has witnessed widespread adoption, one critical component, Graph Contrastive Learning (GCL), has not been thoroughly investigated in the existing literature. Thus, this survey aims to fill this gap by offering a dedicated survey on GCL. We provide a comprehensive overview of the fundamental principles of GCL, including data augmentation strategies, contrastive modes, and contrastive optimization objectives. Furthermore, we explore the extensions of GCL to other aspects of data-efficient graph learning, such as weakly supervised learning, transfer learning, and related scenarios. We also discuss practical applications spanning domains such as drug discovery, genomics analysis, recommender systems, and finally outline the challenges and potential future directions in this field.

Wei Ju, Siyu Yi, Yifan Wang et al. · pku

Graph-structured data, prevalent in domains ranging from social networks to biochemical analysis, serve as the foundation for diverse real-world systems. While graph neural networks demonstrate proficiency in modeling this type of data, their success is often reliant on significant amounts of labeled data, posing a challenge in practical scenarios with limited annotation resources. To tackle this problem, tremendous efforts have been devoted to enhancing graph machine learning performance under low-resource settings by exploring various approaches to minimal supervision. In this paper, we introduce a novel concept of Data-Efficient Graph Learning (DEGL) as a research frontier, and present the first survey that summarizes the current progress of DEGL. We initiate by highlighting the challenges inherent in training models with large labeled data, paving the way for our exploration into DEGL. Next, we systematically review recent advances on this topic from several key aspects, including self-supervised graph learning, semi-supervised graph learning, and few-shot graph learning. Also, we state promising directions for future research, contributing to the evolution of graph machine learning.

Junyu Luo, Yiyang Gu, Xiao Luo et al. · pku

Source-free domain adaptation is a crucial machine learning topic, as it contains numerous applications in the real world, particularly with respect to data privacy. Existing approaches predominantly focus on Euclidean data, such as images and videos, while the exploration of non-Euclidean graph data remains scarce. Recent graph neural network (GNN) approaches can suffer from serious performance decline due to domain shift and label scarcity in source-free adaptation scenarios. In this study, we propose a novel method named Graph Diffusion-based Alignment with Jigsaw (GALA), tailored for source-free graph domain adaptation. To achieve domain alignment, GALA employs a graph diffusion model to reconstruct source-style graphs from target data. Specifically, a score-based graph diffusion model is trained using source graphs to learn the generative source styles. Then, we introduce perturbations to target graphs via a stochastic differential equation instead of sampling from a prior, followed by the reverse process to reconstruct source-style graphs. We feed the source-style graphs into an off-the-shelf GNN and introduce class-specific thresholds with curriculum learning, which can generate accurate and unbiased pseudo-labels for target graphs. Moreover, we develop a simple yet effective graph-mixing strategy named graph jigsaw to combine confident graphs and unconfident graphs, which can enhance generalization capabilities and robustness via consistency learning. Extensive experiments on benchmark datasets validate the effectiveness of GALA.

Junyu Luo, Xiaochen Wang, Jiaqi Wang et al.

Automatic International Classification of Diseases (ICD) coding plays a crucial role in the extraction of relevant information from clinical notes for proper recording and billing. One of the most important directions for boosting the performance of automatic ICD coding is modeling ICD code relations. However, current methods insufficiently model the intricate relationships among ICD codes and often overlook the importance of context in clinical notes. In this paper, we propose a novel approach, a contextualized and flexible framework, to enhance the learning of ICD code representations. Our approach, unlike existing methods, employs a dependent learning paradigm that considers the context of clinical notes in modeling all possible code relations. We evaluate our approach on six public ICD coding datasets and the experimental results demonstrate the effectiveness of our approach compared to state-of-the-art baselines.

Junyu Luo, Xiao Luo, Kaize Ding et al. · pku

Supervised fine-tuning (SFT) plays a crucial role in adapting large language models (LLMs) to specific domains or tasks. However, as demonstrated by empirical experiments, the collected data inevitably contains noise in practical applications, which poses significant challenges to model performance on downstream tasks. Therefore, there is an urgent need for a noise-robust SFT framework to enhance model capabilities in downstream tasks. To address this challenge, we introduce a robust SFT framework (RobustFT) that performs noise detection and relabeling on downstream task data. For noise identification, our approach employs a multi-expert collaborative system with inference-enhanced models to achieve superior noise detection. In the denoising phase, we utilize a context-enhanced strategy, which incorporates the most relevant and confident knowledge followed by careful assessment to generate reliable annotations. Additionally, we introduce an effective data selection mechanism based on response entropy, ensuring only high-quality samples are retained for fine-tuning. Extensive experiments conducted on multiple LLMs across five datasets demonstrate RobustFT's exceptional performance in noisy scenarios.

Jiaqi Wang, Junyu Luo, Muchao Ye et al.

The development of electronic health records (EHR) systems has enabled the collection of a vast amount of digitized patient data. However, utilizing EHR data for predictive modeling presents several challenges due to its unique characteristics. With the advancements in machine learning techniques, deep learning has demonstrated its superiority in various applications, including healthcare. This survey systematically reviews recent advances in deep learning-based predictive models using EHR data. Specifically, we begin by introducing the background of EHR data and providing a mathematical definition of the predictive modeling task. We then categorize and summarize predictive deep models from multiple perspectives. Furthermore, we present benchmarks and toolkits relevant to predictive modeling in healthcare. Finally, we conclude this survey by discussing open challenges and suggesting promising directions for future research.

Junyu Luo, Xiao Luo, Xiusi Chen et al. · pku

Supervised fine-tuning (SFT) is crucial in adapting large language model (LLMs) to a specific domain or task. However, only a limited amount of labeled data is available in practical applications, which poses a severe challenge for SFT in yielding satisfactory results. Therefore, a data-efficient framework that can fully exploit labeled and unlabeled data for LLM fine-tuning is highly anticipated.Towards this end, we introduce a semi-supervised fine-tuning(SemiFT) task and a framework named SemiEvol for LLM alignment from a propagate-and-select manner. For knowledge propagation, SemiEvol adopts a bi-level approach, propagating knowledge from labeled data to unlabeled data through both in-weight and in-context methods. For knowledge selection, SemiEvol incorporates a collaborative learning mechanism, selecting higher-quality pseudo-response samples. We conducted experiments using GPT-4o-mini and Llama-3.1 on seven general or domain-specific datasets, demonstrating significant improvements in model performance on target data. Furthermore, we compared SemiEvol with SFT and self-evolution methods, highlighting its practicality in hybrid data scenarios.

Junyu Luo, Yusheng Zhao, Xiao Luo et al. · pku

Unsupervised efficient domain adaptive retrieval aims to transfer knowledge from a labeled source domain to an unlabeled target domain, while maintaining low storage cost and high retrieval efficiency. However, existing methods typically fail to address potential noise in the target domain, and directly align high-level features across domains, thus resulting in suboptimal retrieval performance. To address these challenges, we propose a novel Cross-Domain Diffusion with Progressive Alignment method (COUPLE). This approach revisits unsupervised efficient domain adaptive retrieval from a graph diffusion perspective, simulating cross-domain adaptation dynamics to achieve a stable target domain adaptation process. First, we construct a cross-domain relationship graph and leverage noise-robust graph flow diffusion to simulate the transfer dynamics from the source domain to the target domain, identifying lower noise clusters. We then leverage the graph diffusion results for discriminative hash code learning, effectively learning from the target domain while reducing the negative impact of noise. Furthermore, we employ a hierarchical Mixup operation for progressive domain alignment, which is performed along the cross-domain random walk paths. Utilizing target domain discriminative hash learning and progressive domain alignment, COUPLE enables effective domain adaptive hash learning. Extensive experiments demonstrate COUPLE's effectiveness on competitive benchmarks.

Yusheng Zhao, Junyu Luo, Xiao Luo et al. · pku

Test-time adaptation aims to adapt a well-trained model to potential distribution shifts at test time using only unlabeled test data, without access to the original training data. While previous efforts mainly focus on a single modality, test-time distribution shift in the multi-modal setting is more complex and calls for new solutions. This paper tackles the problem of multi-modal test-time adaptation by proposing a novel method named Attention Bootstrapping with Principal Entropy Minimization (ABPEM). We observe that test-time distribution shift causes misalignment across modalities, leading to a large gap between intra-modality discrepancies (measured by self-attention) and inter-modality discrepancies (measured by cross-attention). We name this the attention gap. This attention gap widens with more severe distribution shifts, hindering effective modality fusion. To mitigate this attention gap and encourage better modality fusion, we propose attention bootstrapping that promotes cross-attention with the guidance of self-attention. Moreover, to reduce the gradient noise in the commonly-used entropy minimization, we adopt principal entropy minimization, a refinement of entropy minimization that reduces gradient noise by focusing on the principal parts of entropy, excluding less reliable gradient information. Extensive experiments on the benchmarks validate the effectiveness of the proposed ABPEM in comparison with competing baselines.

Junyu Luo, Yuhao Tang, Yiwei Fu et al. · pku

Unsupervised Graph Domain Adaptation (UGDA) leverages labeled source domain graphs to achieve effective performance in unlabeled target domains despite distribution shifts. However, existing methods often yield suboptimal results due to the entanglement of causal-spurious features and the failure of global alignment strategies. We propose SLOGAN (Sparse Causal Discovery with Generative Intervention), a novel approach that achieves stable graph representation transfer through sparse causal modeling and dynamic intervention mechanisms. Specifically, SLOGAN first constructs a sparse causal graph structure, leveraging mutual information bottleneck constraints to disentangle sparse, stable causal features while compressing domain-dependent spurious correlations through variational inference. To address residual spurious correlations, we innovatively design a generative intervention mechanism that breaks local spurious couplings through cross-domain feature recombination while maintaining causal feature semantic consistency via covariance constraints. Furthermore, to mitigate error accumulation in target domain pseudo-labels, we introduce a category-adaptive dynamic calibration strategy, ensuring stable discriminative learning. Extensive experiments on multiple real-world datasets demonstrate that SLOGAN significantly outperforms existing baselines.

Yusheng Zhao, Junyu Luo, Xiao Luo et al. · pku

Multi-modal large language models (MLLMs) have recently achieved great success in processing and understanding information from diverse modalities (e.g., text, audio, and visual signals). Despite their growing popularity, there remains a lack of comprehensive evaluation measuring the audio-visual capabilities of these models, especially in diverse scenarios (e.g., distribution shifts and adversarial attacks). In this paper, we present a multifaceted evaluation of the audio-visual capability of MLLMs, focusing on four key dimensions: effectiveness, efficiency, generalizability, and robustness. Through extensive experiments, we find that MLLMs exhibit strong zero-shot and few-shot generalization abilities, enabling them to achieve great performance with limited data. However, their success relies heavily on the vision modality, which impairs performance when visual input is corrupted or missing. Additionally, while MLLMs are susceptible to adversarial samples, they demonstrate greater robustness compared to traditional models. The experimental results and our findings provide insights into the audio-visual capabilities of MLLMs, highlighting areas for improvement and offering guidance for future research.

Muchao Ye, Junyu Luo, Guanjie Zheng et al.

Deep neural networks (DNNs) have been broadly adopted in health risk prediction to provide healthcare diagnoses and treatments. To evaluate their robustness, existing research conducts adversarial attacks in the white/gray-box setting where model parameters are accessible. However, a more realistic black-box adversarial attack is ignored even though most real-world models are trained with private data and released as black-box services on the cloud. To fill this gap, we propose the first black-box adversarial attack method against health risk prediction models named MedAttacker to investigate their vulnerability. MedAttacker addresses the challenges brought by EHR data via two steps: hierarchical position selection which selects the attacked positions in a reinforcement learning (RL) framework and substitute selection which identifies substitute with a score-based principle. Particularly, by considering the temporal context inside EHRs, it initializes its RL position selection policy by using the contribution score of each visit and the saliency score of each code, which can be well integrated with the deterministic substitute selection process decided by the score changes. In experiments, MedAttacker consistently achieves the highest average success rate and even outperforms a recent white-box EHR adversarial attack technique in certain cases when attacking three advanced health risk prediction models in the black-box setting across multiple real-world datasets. In addition, based on the experiment results we include a discussion on defending EHR adversarial attacks.

Junyu Luo, Jianlei Yang, Xucheng Ye et al.

Federated learning aims to protect users' privacy while performing data analysis from different participants. However, it is challenging to guarantee the training efficiency on heterogeneous systems due to the various computational capabilities and communication bottlenecks. In this work, we propose FedSkel to enable computation-efficient and communication-efficient federated learning on edge devices by only updating the model's essential parts, named skeleton networks. FedSkel is evaluated on real edge devices with imbalanced datasets. Experimental results show that it could achieve up to 5.52$\times$ speedups for CONV layers' back-propagation, 1.82$\times$ speedups for the whole training process, and reduce 64.8% communication cost, with negligible accuracy loss.

Dailan He, Yusheng Zhao, Junyu Luo et al.

Recently proposed fine-grained 3D visual grounding is an essential and challenging task, whose goal is to identify the 3D object referred by a natural language sentence from other distractive objects of the same category. Existing works usually adopt dynamic graph networks to indirectly model the intra/inter-modal interactions, making the model difficult to distinguish the referred object from distractors due to the monolithic representations of visual and linguistic contents. In this work, we exploit Transformer for its natural suitability on permutation-invariant 3D point clouds data and propose a TransRefer3D network to extract entity-and-relation aware multimodal context among objects for more discriminative feature learning. Concretely, we devise an Entity-aware Attention (EA) module and a Relation-aware Attention (RA) module to conduct fine-grained cross-modal feature matching. Facilitated by co-attention operation, our EA module matches visual entity features with linguistic entity features while RA module matches pair-wise visual relation features with linguistic relation features, respectively. We further integrate EA and RA modules into an Entity-and-Relation aware Contextual Block (ERCB) and stack several ERCBs to form our TransRefer3D for hierarchical multimodal context modeling. Extensive experiments on both Nr3D and Sr3D datasets demonstrate that our proposed model significantly outperforms existing approaches by up to 10.6% and claims the new state-of-the-art. To the best of our knowledge, this is the first work investigating Transformer architecture for fine-grained 3D visual grounding task.

Zewei Long, Liwei Che, Yaqing Wang et al.

Federated learning (FL) has emerged as an effective technique to co-training machine learning models without actually sharing data and leaking privacy. However, most existing FL methods focus on the supervised setting and ignore the utilization of unlabeled data. Although there are a few existing studies trying to incorporate unlabeled data into FL, they all fail to maintain performance guarantees or generalization ability in various real-world settings. In this paper, we focus on designing a general framework FedSiam to tackle different scenarios of federated semi-supervised learning, including four settings in the labels-at-client scenario and two setting in the labels-at-server scenario. FedSiam is built upon a siamese network into FL with a momentum update to handle the non-IID challenges introduced by unlabeled data. We further propose a new metric to measure the divergence of local model layers within the siamese network. Based on the divergence, FedSiam can automatically select layer-level parameters to be uploaded to the server in an adaptive manner. Experimental results on three datasets under two scenarios with different data distribution settings demonstrate that the proposed FedSiam framework outperforms state-of-the-art baselines.

Junyu Luo, Zifei Zheng, Hanzhong Ye et al.

Patients with low health literacy usually have difficulty understanding medical jargon and the complex structure of professional medical language. Although some studies are proposed to automatically translate expert language into layperson-understandable language, only a few of them focus on both accuracy and readability aspects simultaneously in the clinical domain. Thus, simplification of the clinical language is still a challenging task, but unfortunately, it is not yet fully addressed in previous work. To benchmark this task, we construct a new dataset named MedLane to support the development and evaluation of automated clinical language simplification approaches. Besides, we propose a new model called DECLARE that follows the human annotation procedure and achieves state-of-the-art performance compared with eight strong baselines. To fairly evaluate the performance, we also propose three specific evaluation metrics. Experimental results demonstrate the utility of the annotated MedLane dataset and the effectiveness of the proposed model DECLARE.

Pengcheng Dai, Jianlei Yang, Xucheng Ye et al.

Training Convolutional Neural Networks (CNNs) usually requires a large number of computational resources. In this paper, \textit{SparseTrain} is proposed to accelerate CNN training by fully exploiting the sparsity. It mainly involves three levels of innovations: activation gradients pruning algorithm, sparse training dataflow, and accelerator architecture. By applying a stochastic pruning algorithm on each layer, the sparsity of back-propagation gradients can be increased dramatically without degrading training accuracy and convergence rate. Moreover, to utilize both \textit{natural sparsity} (resulted from ReLU or Pooling layers) and \textit{artificial sparsity} (brought by pruning algorithm), a sparse-aware architecture is proposed for training acceleration. This architecture supports forward and back-propagation of CNN by adopting 1-Dimensional convolution dataflow. We have built %a simple compiler to map CNNs topology onto \textit{SparseTrain}, and a cycle-accurate architecture simulator to evaluate the performance and efficiency based on the synthesized design with $14nm$ FinFET technologies. Evaluation results on AlexNet/ResNet show that \textit{SparseTrain} could achieve about $2.7 \times$ speedup and $2.2 \times$ energy efficiency improvement on average compared with the original training process.

Xucheng Ye, Pengcheng Dai, Junyu Luo et al.

Sparsification is an efficient approach to accelerate CNN inference, but it is challenging to take advantage of sparsity in training procedure because the involved gradients are dynamically changed. Actually, an important observation shows that most of the activation gradients in back-propagation are very close to zero and only have a tiny impact on weight-updating. Hence, we consider pruning these very small gradients randomly to accelerate CNN training according to the statistical distribution of activation gradients. Meanwhile, we theoretically analyze the impact of pruning algorithm on the convergence. The proposed approach is evaluated on AlexNet and ResNet-\{18, 34, 50, 101, 152\} with CIFAR-\{10, 100\} and ImageNet datasets. Experimental results show that our training approach could substantially achieve up to $5.92 \times$ speedups at back-propagation stage with negligible accuracy loss.

Junyu Luo, Yong Xu, Chenwei Tang et al.

The inverse mapping of GANs'(Generative Adversarial Nets) generator has a great potential value.Hence, some works have been developed to construct the inverse function of generator by directly learning or adversarial learning.While the results are encouraging, the problem is highly challenging and the existing ways of training inverse models of GANs have many disadvantages, such as hard to train or poor performance.Due to these reasons, we propose a new approach based on using inverse generator ($IG$) model as encoder and pre-trained generator ($G$) as decoder of an AutoEncoder network to train the $IG$ model. In the proposed model, the difference between the input and output, which are both the generated image of pre-trained GAN's generator, of AutoEncoder is directly minimized. The optimizing method can overcome the difficulty in training and inverse model of an non one-to-one function.We also applied the inverse model of GANs' generators to image searching and translation.The experimental results prove that the proposed approach works better than the traditional approaches in image searching.