Xingjian Zhang

Brian Ondov, Chia-Hsuan Chang, Weipeng Zhou et al.

High-dimensional biomedical data, such as cell-by-gene matrices, are increasingly generated temporally. However, Manifold Learning algorithms, like t-SNE and UMAP, cannot incorporate time-ordering in their layouts, obfuscating the dynamics of cell types or other classes. As a solution, we present IRIS, a new Manifold Learning algorithm that structures layouts both chronologically and by manifold topology. IRIS can visualize a wide range of dynamic biomedical data, including scRNA-seq, comparative metagenomics, and literature.

Jiaqi Ma, Xingjian Zhang, Hezheng Fan et al.

Establishing open and general benchmarks has been a critical driving force behind the success of modern machine learning techniques. As machine learning is being applied to broader domains and tasks, there is a need to establish richer and more diverse benchmarks to better reflect the reality of the application scenarios. Graph learning is an emerging field of machine learning that urgently needs more and better benchmarks. To accommodate the need, we introduce Graph Learning Indexer (GLI), a benchmark curation platform for graph learning. In comparison to existing graph learning benchmark libraries, GLI highlights two novel design objectives. First, GLI is designed to incentivize \emph{dataset contributors}. In particular, we incorporate various measures to minimize the effort of contributing and maintaining a dataset, increase the usability of the contributed dataset, as well as encourage attributions to different contributors of the dataset. Second, GLI is designed to curate a knowledge base, instead of a plain collection, of benchmark datasets. We use multiple sources of meta information to augment the benchmark datasets with \emph{rich characteristics}, so that they can be easily selected and used in downstream research or development. The source code of GLI is available at \url{https://github.com/Graph-Learning-Benchmarks/gli}.

Weng Lam Tam, Xiao Liu, Kaixuan Ji et al. · tsinghua

Prompt tuning attempts to update few task-specific parameters in pre-trained models. It has achieved comparable performance to fine-tuning of the full parameter set on both language understanding and generation tasks. In this work, we study the problem of prompt tuning for neural text retrievers. We introduce parameter-efficient prompt tuning for text retrieval across in-domain, cross-domain, and cross-topic settings. Through an extensive analysis, we show that the strategy can mitigate the two issues -- parameter-inefficiency and weak generalizability -- faced by fine-tuning based retrieval methods. Notably, it can significantly improve the out-of-domain zero-shot generalization of the retrieval models. By updating only 0.1% of the model parameters, the prompt tuning strategy can help retrieval models achieve better generalization performance than traditional methods in which all parameters are updated. Finally, to facilitate research on retrievers' cross-topic generalizability, we curate and release an academic retrieval dataset with 18K query-results pairs in 87 topics, making it the largest topic-specific one to date.

Jin Huang, Xingjian Zhang, Qiaozhu Mei et al.

Large language models (LLMs) are gaining increasing attention for their capability to process graphs with rich text attributes, especially in a zero-shot fashion. Recent studies demonstrate that LLMs obtain decent text classification performance on common text-rich graph benchmarks, and the performance can be improved by appending encoded structural information as natural languages into prompts. We aim to understand why the incorporation of structural information inherent in graph data can improve the prediction performance of LLMs. First, we rule out the concern of data leakage by curating a novel leakage-free dataset and conducting a comparative analysis alongside a previously widely-used dataset. Second, as past work usually encodes the ego-graph by describing the graph structure in natural language, we ask the question: do LLMs understand the graph structure in accordance with the intent of the prompt designers? Third, we investigate why LLMs can improve their performance after incorporating structural information. Our exploration of these questions reveals that (i) there is no substantial evidence that the performance of LLMs is significantly attributed to data leakage; (ii) instead of understanding prompts as graph structures as intended by the prompt designers, LLMs tend to process prompts more as contextual paragraphs and (iii) the most efficient elements of the local neighborhood included in the prompt are phrases that are pertinent to the node label, rather than the graph structure.

Seongbin Lim, Xingjian Zhang, Emmanuel Beaurepaire et al.

BioImageLoader (BIL) is a python library that handles bioimage datasets for machine learning applications, easing simple workflows and enabling complex ones. BIL attempts to wrap the numerous and varied bioimages datasets in unified interfaces, to easily concatenate, perform image augmentation, and batch-load them. By acting at a per experimental dataset level, it enables both a high level of customization and a comparison across experiments. Here we present the library and show some application it enables, including retraining published deep learning architectures and evaluating their versatility in a leave-one-dataset-out fashion.

Lei Qu, Lianhai Ren, Peng Cheng et al.

An increasing variety of AI accelerators is being considered for large-scale training. However, enabling large-scale training on early-life AI accelerators faces three core challenges: frequent system disruptions and undefined failure modes that undermine reliability; numerical errors and training instabilities that threaten correctness and convergence; and the complexity of parallelism optimization combined with unpredictable local noise that degrades efficiency. To address these challenges, SIGMA is an open-source training stack designed to improve the reliability, stability, and efficiency of large-scale distributed training on early-life AI hardware. The core of this initiative is the LUCIA TRAINING PLATFORM (LTP), the system optimized for clusters with early-life AI accelerators. Since its launch in March 2025, LTP has significantly enhanced training reliability and operational productivity. Over the past five months, it has achieved an impressive 94.45% effective cluster accelerator utilization, while also substantially reducing node recycling and job-recovery times. Building on the foundation of LTP, the LUCIA TRAINING FRAMEWORK (LTF) successfully trained SIGMA-MOE, a 200B MoE model, using 2,048 AI accelerators. This effort delivered remarkable stability and efficiency outcomes, achieving 21.08% MFU, state-of-the-art downstream accuracy, and encountering only one stability incident over a 75-day period. Together, these advances establish SIGMA, which not only tackles the critical challenges of large-scale training but also establishes a new benchmark for AI infrastructure and platform innovation, offering a robust, cost-effective alternative to prevailing established accelerator stacks and significantly advancing AI capabilities and scalability. The source code of SIGMA is available at https://github.com/microsoft/LuciaTrainingPlatform.

Siwei Wen, Zhangcheng Wang, Xingjian Zhang et al.

Online video understanding requires models to perform continuous perception and long-range reasoning within potentially infinite visual streams. Its fundamental challenge lies in the conflict between the unbounded nature of streaming media input and the limited context window of Multimodal Large Language Models (MLLMs). Current methods primarily rely on passive processing, which often face a trade-off between maintaining long-range context and capturing the fine-grained details necessary for complex tasks. To address this, we introduce EventMemAgent, an active online video agent framework based on a hierarchical memory module. Our framework employs a dual-layer strategy for online videos: short-term memory detects event boundaries and utilizes event-granular reservoir sampling to process streaming video frames within a fixed-length buffer dynamically; long-term memory structuredly archives past observations on an event-by-event basis. Furthermore, we integrate a multi-granular perception toolkit for active, iterative evidence capture and employ Agentic Reinforcement Learning (Agentic RL) to end-to-end internalize reasoning and tool-use strategies into the agent's intrinsic capabilities. Experiments show that EventMemAgent achieves competitive results on online video benchmarks. The code will be released here: https://github.com/lingcco/EventMemAgent.

Xingjian Zhang, Siwei Wen, Wenjun Wu et al.

Recently, improving the reasoning ability of large multimodal models (LMMs) through reinforcement learning has made great progress. However, most existing works are based on highly reasoning-intensive datasets such as mathematics and code, and researchers generally choose large-scale models as the foundation. We argue that exploring small-scale models' reasoning capabilities remains valuable for researchers with limited computational resources. Moreover, enabling models to explain their reasoning processes on general question-answering datasets is equally meaningful. Therefore, we present the small-scale video reasoning model TinyLLaVA-Video-R1. Based on TinyLLaVA-Video, a traceably trained video understanding model with no more than 4B parameters, it not only demonstrates significantly improved reasoning and thinking capabilities after using reinforcement learning on general Video-QA datasets, but also exhibits the emergent characteristic of "aha moments". Furthermore, we share a series of experimental findings, aiming to provide practical insights for future exploration of video reasoning (thinking) abilities in small-scale models. It is available at https://github.com/ZhangXJ199/TinyLLaVA-Video-R1.

Junlong Jia, Ying Hu, Xi Weng et al.

We present TinyLLaVA Factory, an open-source modular codebase for small-scale large multimodal models (LMMs) with a focus on simplicity of code implementations, extensibility of new features, and reproducibility of training results. Following the design philosophy of the factory pattern in software engineering, TinyLLaVA Factory modularizes the entire system into interchangeable components, with each component integrating a suite of cutting-edge models and methods, meanwhile leaving room for extensions to more features. In addition to allowing users to customize their own LMMs, TinyLLaVA Factory provides popular training recipes to let users pretrain and finetune their models with less coding effort. Empirical experiments validate the effectiveness of our codebase. The goal of TinyLLaVA Factory is to assist researchers and practitioners in exploring the wide landscape of designing and training small-scale LMMs with affordable computational resources.

Xingjian Zhang, Siwei Wen, Wenjun Wu et al.

Large Language Models (LLMs) have made remarkable progress in enhancing step-by-step reasoning through reinforcement learning. However, the Group Relative Policy Optimization (GRPO) algorithm, which relies on sparse reward rules, often encounters the issue of identical rewards within groups, leading to the advantage collapse problem. Existing works typically address this challenge from two perspectives: enforcing model reflection to enhance response diversity, and introducing internal feedback to augment the training signal (advantage). In this work, we begin by analyzing the limitations of model reflection and investigating the policy entropy of responses at the fine-grained sample level. Based on our experimental findings, we propose the EDGE-GRPO algorithm, which adopts \textbf{E}ntropy-\textbf{D}riven Advantage and \textbf{G}uided \textbf{E}rror Correction to effectively mitigate the problem of advantage collapse. Extensive experiments on several main reasoning benchmarks demonstrate the effectiveness and superiority of our approach. It is available at https://github.com/ZhangXJ199/EDGE-GRPO.

Yuanshuai Wang, Xingjian Zhang, Jinkun Zhao et al.

Large Language Models (LLMs) are key technologies driving intelligent systems to handle multiple tasks. To meet the demands of various tasks, an increasing number of LLMs-driven experts with diverse capabilities have been developed, accompanied by corresponding benchmarks to evaluate their performance. This paper proposes the Bench-CoE framework, which enables Collaboration of Experts (CoE) by effectively leveraging benchmark evaluations to achieve optimal performance across various tasks. Bench-CoE includes a set of expert models, a router for assigning tasks to corresponding experts, and a benchmark dataset for training the router. Moreover, we formulate Query-Level and Subject-Level approaches based on our framework, and analyze the merits and drawbacks of these two approaches. Finally, we conduct a series of experiments with vary data distributions on both language and multimodal tasks to validate that our proposed Bench-CoE outperforms any single model in terms of overall performance. We hope this method serves as a baseline for further research in this area. The code is available at \url{https://github.com/ZhangXJ199/Bench-CoE}.

Yutong Xie, Zhuoheng Li, Xiyuan Wang et al.

Despite their success in numerous fields, the potential of foundation models for modeling and understanding human behavior remains largely unexplored. We introduce Be.FM, one of the first open foundation models designed for human behavior modeling. Built upon open-source large language models and fine-tuned on a diverse range of behavioral data, Be.FM can be used to understand and predict human decision-making. We construct a comprehensive set of benchmark tasks for testing the capabilities of behavioral foundation models. Our results demonstrate that Be.FM can predict behaviors, infer characteristics of individuals and populations, generate insights about contexts, and apply behavioral science knowledge.

Xingjian Zhang, Xi Weng, Yihao Yue et al.

Video behavior recognition and scene understanding are fundamental tasks in multimodal intelligence, serving as critical building blocks for numerous real-world applications. Through large multimodal models (LMMs) have achieved remarkable progress in video understanding, most existing open-source models rely on over 7B parameters and require large-scale datasets for training, making them resource-intensive and inaccessible to many researchers. Furthermore, lightweight models face persistent challenges in effectively processing long visual sequences and temporal understanding. In this work, we introduce TinyLLaVA-Video, a lightweight yet powerful video understanding model with approximately 3.6B parameters. The cornerstone of our design is the video-level group resampler, a novel mechanism that significantly reduces and controls the number of visual tokens at the video level. Unlike traditional image-level resampler, our approach effectively mitigates redundancy while enhancing temporal comprehension, leading to improved performance on video-based tasks. In addition, TinyLLaVA-Video demonstrates exceptional efficiency, requiring only one day of training on 8 A100-40G GPUs. It surpasses several existing 7B-parameter models on multiple benchmarks. We believe this work provides a valuable foundation for future research on lightweight video understanding models. The code and weights is available at https://github.com/ZhangXJ199/TinyLLaVA-Video.

Xinhe Wang, Jin Huang, Xingjian Zhang et al.

Reasoning benchmarks such as the Abstraction and Reasoning Corpus (ARC) and ARC-AGI are widely used to assess progress in artificial intelligence and are often interpreted as probes of core, so-called ``fluid'' reasoning abilities. Despite their apparent simplicity for humans, these tasks remain challenging for frontier vision-language models (VLMs), a gap commonly attributed to deficiencies in machine reasoning. We challenge this interpretation and hypothesize that the gap arises primarily from limitations in visual perception rather than from shortcomings in inductive reasoning. To verify this hypothesis, we introduce a two-stage experimental pipeline that explicitly separates perception and reasoning. In the perception stage, each image is independently converted into a natural-language description, while in the reasoning stage a model induces and applies rules using these descriptions. This design prevents leakage of cross-image inductive signals and isolates reasoning from perception bottlenecks. Across three ARC-style datasets, Mini-ARC, ACRE, and Bongard-LOGO, we show that the perception capability is the dominant factor underlying the observed performance gap by comparing the two-stage pipeline with against standard end-to-end one-stage evaluation. Manual inspection of reasoning traces in the VLM outputs further reveals that approximately 80 percent of model failures stem from perception errors. Together, these results demonstrate that ARC-style benchmarks conflate perceptual and reasoning challenges and that observed performance gaps may overstate deficiencies in machine reasoning. Our findings underscore the need for evaluation protocols that disentangle perception from reasoning when assessing progress in machine intelligence.

Li Wang, Sudun, Xingjian Zhang et al.

Batch Normalization (BN) has played a pivotal role in the success of deep learning by improving training stability, mitigating overfitting, and enabling more effective optimization. However, its adoption in deep reinforcement learning (DRL) has been limited due to the inherent non-i.i.d. nature of data and the dynamically shifting distributions induced by the agent's learning process. In this paper, we argue that, despite these challenges, BN retains unique advantages in DRL settings, particularly through its stochasticity and its ability to ease training. When applied appropriately, BN can adapt to evolving data distributions and enhance both convergence speed and final performance. To this end, we conduct a comprehensive empirical study on the use of BN in off-policy actor-critic algorithms, systematically analyzing how different training and evaluation modes impact performance. We further identify failure modes that lead to instability or divergence, analyze their underlying causes, and propose the Mode-Aware Batch Normalization (MA-BN) method with practical actionable recommendations for robust BN integration in DRL pipelines. We also empirically validate that, in RL settings, MA-BN accelerates and stabilizes training, broadens the effective learning rate range, enhances exploration, and reduces overall optimization difficulty. Our code is available at: https://github.com/monster476/ma-bn.git.

Benhao Huang, Yingzhuo Yu, Jin Huang et al.

The quality of datasets plays an increasingly crucial role in the research and development of modern artificial intelligence (AI). Despite the proliferation of open dataset platforms nowadays, data quality issues, such as incomplete documentation, inaccurate labels, ethical concerns, and outdated information, remain common in widely used datasets. Furthermore, these issues are often subtle and difficult to be detected by rule-based scripts, therefore requiring identification and verification by dataset users or maintainers--a process that is both time-consuming and prone to human mistakes. With the surging ability of large language models (LLM), it's promising to streamline the discovery of hidden dataset issues with LLM agents. To achieve this, one significant challenge is enabling LLM agents to detect issues in the wild rather than simply fixing known ones. In this work, we establish a benchmark to measure LLM agent's ability to tackle this challenge. We carefully curate 221 real-world test cases from eight popular dataset platforms and propose an automatic evaluation framework using GPT-4o. Our proposed framework shows strong empirical alignment with expert evaluations, validated through extensive comparisons with human annotations. Without any hints, most competitive Curator agent can only reveal $\sim$30\% of the data quality issues in the proposed dataset, highlighting the complexity of this task and indicating that applying LLM agents to real-world dataset curation still requires further in-depth exploration and innovation. The data and code are available at \href{https://github.com/TRAIS-Lab/dca-bench}{https://github.com/TRAIS-Lab/dca-bench}.

Xingjian Zhang, Yutong Xie, Jin Huang et al.

Scientific innovation relies on detailed workflows, which include critical steps such as analyzing literature, generating ideas, validating these ideas, interpreting results, and inspiring follow-up research. However, scientific publications that document these workflows are extensive and unstructured. This makes it difficult for both human researchers and AI systems to effectively navigate and explore the space of scientific innovation. To address this issue, we introduce MASSW, a comprehensive text dataset on Multi-Aspect Summarization of Scientific Workflows. MASSW includes more than 152,000 peer-reviewed publications from 17 leading computer science conferences spanning the past 50 years. Using Large Language Models (LLMs), we automatically extract five core aspects from these publications -- context, key idea, method, outcome, and projected impact -- which correspond to five key steps in the research workflow. These structured summaries facilitate a variety of downstream tasks and analyses. The quality of the LLM-extracted summaries is validated by comparing them with human annotations. We demonstrate the utility of MASSW through multiple novel machine-learning tasks that can be benchmarked using this new dataset, which make various types of predictions and recommendations along the scientific workflow. MASSW holds significant potential for researchers to create and benchmark new AI methods for optimizing scientific workflows and fostering scientific innovation in the field. Our dataset is openly available at \url{https://github.com/xingjian-zhang/massw}.

Zhuoxuan Peng, Boan Zhu, Xingjian Zhang et al.

Current mmWave datasets for human pose estimation (HPE) are scarce and lack diversity in both point cloud (PC) attributes and human poses, severely hampering the generalization ability of their trained models. On the other hand, unlabeled mmWave HPE data and diverse LiDAR HPE datasets are readily available. We propose EMDUL, a novel approach to expand the volume and diversity of an existing mmWave dataset using unlabeled mmWave data and a LiDAR dataset. EMDUL trains a pseudo-label estimator to annotate the unlabeled mmWave data and is able to convert, or translate, a given annotated LiDAR PC to its mmWave counterpart. Expanded with both LiDAR-converted and pseudo-labeled mmWave PCs, our mmWave dataset significantly boosts the performance and generalization ability of all our HPE models, with substantial 15.1% and 18.9% error reductions for in-domain and out-of-domain settings, respectively.

Qinyu Zhang, Liang Xu, Jianhao Huang et al.

Driven by the vision of ubiquitous connectivity and wireless intelligence, the evolution of ultra-dense constellation-based satellite-integrated Internet is underway, now taking preliminary shape. Nevertheless, the entrenched institutional silos and limited, nonrenewable heterogeneous network resources leave current satellite systems struggling to accommodate the escalating demands of next-generation intelligent applications. In this context, the distributed satellite information networks (DSIN), exemplified by the cohesive clustered satellites system, have emerged as an innovative architecture, bridging information gaps across diverse satellite systems, such as communication, navigation, and remote sensing, and establishing a unified, open information network paradigm to support resilient space information services. This survey first provides a profound discussion about innovative network architectures of DSIN, encompassing distributed regenerative satellite network architecture, distributed satellite computing network architecture, and reconfigurable satellite formation flying, to enable flexible and scalable communication, computing and control. The DSIN faces challenges from network heterogeneity, unpredictable channel dynamics, sparse resources, and decentralized collaboration frameworks. To address these issues, a series of enabling technologies is identified, including channel modeling and estimation, cloud-native distributed MIMO cooperation, grant-free massive access, network routing, and the proper combination of all these diversity techniques. Furthermore, to heighten the overall resource efficiency, the cross-layer optimization techniques are further developed to meet upper-layer deterministic, adaptive and secure information services requirements. In addition, emerging research directions and new opportunities are highlighted on the way to achieving the DSIN vision.

Yangtao Deng, Xiang Shi, Zhuo Jiang et al.

Large-scale distributed model training requires simultaneous training on up to thousands of machines. Faulty machine detection is critical when an unexpected fault occurs in a machine. From our experience, a training task can encounter two faults per day on average, possibly leading to a halt for hours. To address the drawbacks of the time-consuming and labor-intensive manual scrutiny, we propose Minder, an automatic faulty machine detector for distributed training tasks. The key idea of Minder is to automatically and efficiently detect faulty distinctive monitoring metric patterns, which could last for a period before the entire training task comes to a halt. Minder has been deployed in our production environment for over one year, monitoring daily distributed training tasks where each involves up to thousands of machines. In our real-world fault detection scenarios, Minder can accurately and efficiently react to faults within 3.6 seconds on average, with a precision of 0.904 and F1-score of 0.893.

Xiaopeng Yuan, Xingjian Zhang, Ke Xu et al.

Large language models (LLMs) are increasingly used for tasks that require complex reasoning. Most benchmarks focus on final outcomes but overlook the intermediate reasoning steps - such as planning, revision, and decision making under resource constraints. We argue that measuring these internal processes is essential for understanding model behavior and improving reliability. We propose using strategic games as a natural evaluation environment: closed, rule-based systems with clear states, limited resources, and automatic feedback. We introduce a framework that evaluates LLMs along three core dimensions: planning, revision, and resource-constrained decision making. To operationalize this, we define metrics beyond win rate, including overcorrection risk rate, correction success rate, improvement slope, and over-budget ratio. In 4320 adversarial rounds across 12 leading models, ChatGPT-o3-mini achieves the top composite score, with a win rate of 74.7 percent, a correction success rate of 78.6 percent, and an improvement slope of 0.041. By contrast, Qwen-Plus, despite an overcorrection risk rate of 81.6 percent, wins only 25.6 percent of its matches - primarily due to excessive resource use. We also observe a negative correlation between overcorrection risk rate and correction success rate (Pearson r = -0.51, p = 0.093), suggesting that more frequent edits do not always improve outcomes. Our findings highlight the value of assessing not only what LLMs decide but how they arrive at those decisions

Guangyu Lei, Tianhao Liang, Yuqi Ping et al.

The rapid development of the low-altitude economy emphasizes the critical need for effective perception and intent recognition of non-cooperative unmanned aerial vehicles (UAVs). The advanced generative reasoning capabilities of multimodal large language models (MLLMs) present a promising approach in such tasks. In this paper, we focus on the combination of UAV intent recognition and the MLLMs. Specifically, we first present an MLLM-enabled UAV intent recognition architecture, where the multimodal perception system is utilized to obtain real-time payload and motion information of UAVs, generating structured input information, and MLLM outputs intent recognition results by incorporating environmental information, prior knowledge, and tactical preferences. Subsequently, we review the related work and demonstrate their progress within the proposed architecture. Then, a use case for low-altitude confrontation is conducted to demonstrate the feasibility of our architecture and offer valuable insights for practical system design. Finally, the future challenges are discussed, followed by corresponding strategic recommendations for further applications.

Xingjian Zhang, Yuhao Wang

Determining potential probability distributions with a given causal graph is vital for causality studies. To bypass the difficulty in characterizing latent variables in a Bayesian network, the nested Markov model provides an elegant algebraic approach by listing exactly all the equality constraints on the observed variables. However, this algebraically motivated causal model comprises distributions outside Bayesian networks, and its physical interpretation remains vague. In this work, we inspect the nested Markov model through the lens of generalized probabilistic theory, an axiomatic framework to describe general physical theories. We prove that all the equality constraints defining the nested Markov model hold valid theory-independently. Yet, we show this model generally contains distributions not implementable even within such relaxed physical theories subjected to merely the relativity principles and mild probabilistic rules. To interpret the origin of such a gap, we establish a new causal model that defines valid distributions as projected from a high-dimensional Bell-type causal structure. The new model unveils inequality constraints induced by relativity principles, or equivalently high-dimensional conditional independences, which are absent in the nested Markov model. Nevertheless, we also notice that the restrictions on states and measurements introduced by the generalized probabilistic theory framework can pose additional inequality constraints beyond the new causal model. As a by-product, we discover a new causal structure exhibiting strict gaps between the distribution sets of a Bayesian network, generalized probabilistic theories, and the nested Markov model. We anticipate our results will enlighten further explorations on the unification of algebraic and physical perspectives of causality.

Xingjian Zhang, Sophia Moylan, Ziyang Xiong et al.

Scientific knowledge bases accelerate discovery by curating findings from primary literature into structured, queryable formats for both human researchers and emerging AI systems. Maintaining these resources requires expert curators to search relevant papers, reconcile evidence across documents, and produce ontology-grounded annotations - a workflow that existing benchmarks, focused on isolated subtasks like named entity recognition or relation extraction, do not capture. We present FlyBench to evaluate AI agents on end-to-end agentic ontology curation from scientific literature. Given only a gene symbol, agents must search and read from a corpus of 16,898 full-text papers to produce structured annotations: Gene Ontology terms describing function, expression patterns, and historical synonyms linking decades of nomenclature. The benchmark includes 7,397 expert-curated annotations across 100 genes drawn from FlyBase, the Drosophila (fruit fly) knowledge base. We evaluate four baseline agent architectures: memorization, fixed pipeline, single-agent, and multi-agent. We find that architectural choices significantly impact performance, with multi-agent designs outperforming simpler alternatives, yet scaling backbone models yields diminishing returns. All baselines leave substantial room for improvement. Our analysis surfaces several findings to guide future development; for example, agents primarily use retrieval to confirm parametric knowledge rather than discover new information. We hope FlyBench will drive progress on retrieval-augmented scientific reasoning, a capability with broad applications across scientific domains.

Xingjian Zhang, Tianhong Gao, Suliang Jin et al.

Large language models (LLMs) are increasingly used as raters for evaluation tasks. However, their reliability is often limited for subjective tasks, when human judgments involve subtle reasoning beyond annotation labels. Thinking traces, the reasoning behind a judgment, are highly informative but challenging to collect and curate. We present a human-LLM collaborative framework to infer thinking traces from label-only annotations. The proposed framework uses a simple and effective rejection sampling method to reconstruct these traces at scale. These inferred thinking traces are applied to two complementary tasks: (1) fine-tuning open LLM raters; and (2) synthesizing clearer annotation guidelines for proprietary LLM raters. Across multiple datasets, our methods lead to significantly improved LLM-human agreement. Additionally, the refined annotation guidelines increase agreement among different LLM models. These results suggest that LLMs can serve as practical proxies for otherwise unrevealed human thinking traces, enabling label-only corpora to be extended into thinking-trace-augmented resources that enhance the reliability of LLM raters.

Shiyao Jiang, Jian Jiao, Xingjian Zhang et al.

With the emergence of diverse and massive data in the upcoming sixth-generation (6G) networks, the task-agnostic semantic communication system is regarded to provide robust intelligent services. In this paper, we propose a task-agnostic learnable weighted-knowledge base semantic communication (TALSC) framework for robust image transmission to address the real-world heterogeneous data bias in KB, including label flipping noise and class imbalance. The TALSC framework incorporates a sample confidence module (SCM) as meta-learner and the semantic coding networks as learners. The learners are updated based on the empirical knowledge provided by the learnable weighted-KB (LW-KB). Meanwhile, the meta-learner evaluates the significance of samples according to the task loss feedback, and adjusts the update strategy of learners to enhance the robustness in semantic recovery for unknown tasks. To strike a balance between SCM parameters and precision of significance evaluation, we design an SCM-grid extension (SCM-GE) approach by embedding the Kolmogorov-Arnold networks (KAN) within SCM, which leverages the concept of spline refinement in KAN and enables scalable SCM with customizable granularity without retraining. Simulations demonstrate that the TALSC framework effectively mitigates the effects of flipping noise and class imbalance in task-agnostic image semantic communication, achieving at least 12% higher semantic recovery accuracy (SRA) and multi-scale structural similarity (MS-SSIM) compared to state-of-the-art methods.

Jinkun Zhao, Yuanshuai Wang, Xingjian Zhang et al.

With the rapid evolution of artificial intelligence, AIOps has emerged as a prominent paradigm in DevOps. Lots of work has been proposed to improve the performance of different AIOps phases. However, constrained by domain-specific knowledge, a single model can only handle the operation requirement of a specific task,such as log parser,root cause analysis. Meanwhile, combining multiple models can achieve more efficient results, which have been proved in both previous ensemble learning and the recent LLM training domain. Inspired by these works,to address the similar challenges in AIOPS, this paper first proposes a collaboration-of-expert framework(CoE-Ops) incorporating a general-purpose large language model task classifier. A retrieval-augmented generation mechanism is introduced to improve the framework's capability in handling both Question-Answering tasks with high-level(Code,build,Test,etc.) and low-level(fault analysis,anomaly detection,etc.). Finally, the proposed method is implemented in the AIOps domain, and extensive experiments are conducted on the DevOps-EVAL dataset. Experimental results demonstrate that CoE-Ops achieves a 72% improvement in routing accuracy for high-level AIOps tasks compared to existing CoE methods, delivers up to 8% accuracy enhancement over single AIOps models in DevOps problem resolution, and outperforms larger-scale Mixture-of-Experts (MoE) models by up to 14% in accuracy.

Xingjian Zhang, Yutong Duan, Zaishu Chen

In the context of Industry 4.0, effective monitoring of multiple targets and states during assembly processes is crucial, particularly when constrained to using only visual sensors. Traditional methods often rely on either multiple sensor types or complex hardware setups to achieve high accuracy in monitoring, which can be cost-prohibitive and difficult to implement in dynamic industrial environments. This study presents a novel approach that leverages multiple machine learning models to achieve precise monitoring under the limitation of using a minimal number of visual sensors. By integrating state information from identical timestamps, our method detects and confirms the current stage of the assembly process with an average accuracy exceeding 92%. Furthermore, our approach surpasses conventional methods by offering enhanced error detection and visuali-zation capabilities, providing real-time, actionable guidance to operators. This not only improves the accuracy and efficiency of assembly monitoring but also re-duces dependency on expensive hardware solutions, making it a more practical choice for modern industrial applications.

M-A-P Team, Xinrun Du, Yifan Yao et al.

Large language models (LLMs) have demonstrated remarkable proficiency in mainstream academic disciplines such as mathematics, physics, and computer science. However, human knowledge encompasses over 200 specialized disciplines, far exceeding the scope of existing benchmarks. The capabilities of LLMs in many of these specialized fields-particularly in light industry, agriculture, and service-oriented disciplines-remain inadequately evaluated. To address this gap, we present SuperGPQA, a comprehensive benchmark that evaluates graduate-level knowledge and reasoning capabilities across 285 disciplines. Our benchmark employs a novel Human-LLM collaborative filtering mechanism to eliminate trivial or ambiguous questions through iterative refinement based on both LLM responses and expert feedback. Our experimental results reveal significant room for improvement in the performance of current state-of-the-art LLMs across diverse knowledge domains (e.g., the reasoning-focused model DeepSeek-R1 achieved the highest accuracy of 61.82% on SuperGPQA), highlighting the considerable gap between current model capabilities and artificial general intelligence. Additionally, we present comprehensive insights from our management of a large-scale annotation process, involving over 80 expert annotators and an interactive Human-LLM collaborative system, offering valuable methodological guidance for future research initiatives of comparable scope.

Xingjian Zhang, Ziyang Xiong, Shixuan Liu et al.

Low-dimensional visualizations, or "projection maps," are widely used in scientific and creative domains to interpret large-scale and complex datasets. These visualizations not only aid in understanding existing knowledge spaces but also implicitly guide exploration into unknown areas. Although techniques such as t-SNE and UMAP can generate these maps, there exists no systematic method for leveraging them to generate new content. To address this, we introduce MapExplorer, a novel knowledge discovery task that translates coordinates within any projection map into coherent, contextually aligned textual content. This allows users to interactively explore and uncover insights embedded in the maps. To evaluate the performance of MapExplorer methods, we propose Atometric, a fine-grained metric inspired by ROUGE that quantifies logical coherence and alignment between generated and reference text. Experiments on diverse datasets demonstrate the versatility of MapExplorer in generating scientific hypotheses, crafting synthetic personas, and devising strategies for attacking large language models-even with simple baseline methods. By bridging visualization and generation, our work highlights the potential of MapExplorer to enable intuitive human-AI collaboration in large-scale data exploration.

Jiaqi Ma, Xingjian Zhang, Qiaozhu Mei

Multinomial Logit (MNL) is one of the most popular discrete choice models and has been widely used to model ranking data. However, there is a long-standing technical challenge of learning MNL from many real-world ranking data: exact calculation of the MNL likelihood of \emph{partial rankings} is generally intractable. In this work, we develop a scalable method for approximating the MNL likelihood of general partial rankings in polynomial time complexity. We also extend the proposed method to learn mixture of MNL. We demonstrate that the proposed methods are particularly helpful for applications to choice-based network formation modeling, where the formation of new edges in a network is viewed as individuals making choices of their friends over a candidate set. The problem of learning mixture of MNL models from partial rankings naturally arises in such applications. And the proposed methods can be used to learn MNL models from network data without the strong assumption that temporal orders of all the edge formation are available. We conduct experiments on both synthetic and real-world network data to demonstrate that the proposed methods achieve more accurate parameter estimation and better fitness of data compared to conventional methods.

Xiao Liu, Da Yin, Jingnan Zheng et al.

Academic knowledge services have substantially facilitated the development of the science enterprise by providing a plenitude of efficient research tools. However, many applications highly depend on ad-hoc models and expensive human labeling to understand scientific contents, hindering deployments into real products. To build a unified backbone language model for different knowledge-intensive academic applications, we pre-train an academic language model OAG-BERT that integrates both the heterogeneous entity knowledge and scientific corpora in the Open Academic Graph (OAG) -- the largest public academic graph to date. In OAG-BERT, we develop strategies for pre-training text and entity data along with zero-shot inference techniques. In OAG-BERT, we develop strategies for pre-training text and entity data along with zero-shot inference techniques. Its zero-shot capability furthers the path to mitigate the need of expensive annotations. OAG-BERT has been deployed for real-world applications, such as the reviewer recommendation function for National Nature Science Foundation of China (NSFC) -- one of the largest funding agencies in China -- and paper tagging in AMiner. All codes and pre-trained models are available via the CogDL toolkit.