Stephen McLaughlin

Kyungmin Choi, JaKeoung Koo, Stephen McLaughlin et al.

Single-photon Lidar imaging offers a significant advantage in 3D imaging due to its high resolution and long-range capabilities, however it is challenging to apply in noisy environments with multiple targets per pixel. To tackle these challenges, several methods have been proposed. Statistical methods demonstrate interpretability on the inferred parameters, but they are often limited in their ability to handle complex scenes. Deep learning-based methods have shown superior performance in terms of accuracy and robustness, but they lack interpretability or they are limited to a single-peak per pixel. In this paper, we propose a deep unrolling algorithm for dual-peak single-photon Lidar imaging. We introduce a hierarchical Bayesian model for multiple targets and propose a neural network that unrolls the underlying statistical method. To support multiple targets, we adopt a dual depth maps representation and exploit geometric deep learning to extract features from the point cloud. The proposed method takes advantages of statistical methods and learning-based methods in terms of accuracy and quantifying uncertainty. The experimental results on synthetic and real data demonstrate the competitive performance when compared to existing methods, while also providing uncertainty information.

Jakeoung Koo, Abderrahim Halimi, Stephen McLaughlin

Deploying 3D single-photon Lidar imaging in real world applications faces multiple challenges including imaging in high noise environments. Several algorithms have been proposed to address these issues based on statistical or learning-based frameworks. Statistical methods provide rich information about the inferred parameters but are limited by the assumed model correlation structures, while deep learning methods show state-of-the-art performance but limited inference guarantees, preventing their extended use in critical applications. This paper unrolls a statistical Bayesian algorithm into a new deep learning architecture for robust image reconstruction from single-photon Lidar data, i.e., the algorithm's iterative steps are converted into neural network layers. The resulting algorithm benefits from the advantages of both statistical and learning based frameworks, providing best estimates with improved network interpretability. Compared to existing learning-based solutions, the proposed architecture requires a reduced number of trainable parameters, is more robust to noise and mismodelling effects, and provides richer information about the estimates including uncertainty measures. Results on synthetic and real data show competitive results regarding the quality of the inference and computational complexity when compared to state-of-the-art algorithms.

Dan Yao, Stephen McLaughlin, Yoann Altmann

This paper presents a scalable approximate Bayesian method for image restoration using total variation (TV) priors. In contrast to most optimization methods based on maximum a posteriori estimation, we use the expectation propagation (EP) framework to approximate minimum mean squared error (MMSE) estimators and marginal (pixel-wise) variances, without resorting to Monte Carlo sampling. For the classical anisotropic TV-based prior, we also propose an iterative scheme to automatically adjust the regularization parameter via expectation-maximization (EM). Using Gaussian approximating densities with diagonal covariance matrices, the resulting method allows highly parallelizable steps and can scale to large images for denoising, deconvolution and compressive sensing (CS) problems. The simulation results illustrate that such EP methods can provide a posteriori estimates on par with those obtained via sampling methods but at a fraction of the computational cost. Moreover, EP does not exhibit strong underestimation of posteriori variances, in contrast to variational Bayes alternatives.

Qianru Zhou, Alasdair J. G. Gray, Stephen McLaughlin

Automatic network management driven by Artificial Intelligent technologies has been heatedly discussed over decades. However, current reports mainly focus on theoretic proposals and architecture designs, works on practical implementations on real-life networks are yet to appear. This paper proposes our effort toward the implementation of knowledge graph driven approach for autonomic network management in software defined networks (SDNs), termed as SeaNet. Driven by the ToCo ontology, SeaNet is reprogrammed based on Mininet (a SDN emulator). It consists three core components, a knowledge graph generator, a SPARQL engine, and a network management API. The knowledge graph generator represents the knowledge in the telecommunication network management tasks into formally represented ontology driven model. Expert experience and network management rules can be formalized into knowledge graph and by automatically inferenced by SPARQL engine, Network management API is able to packet technology-specific details and expose technology-independent interfaces to users. The Experiments are carried out to evaluate proposed work by comparing with a commercial SDN controller Ryu implemented by the same language Python. The evaluation results show that SeaNet is considerably faster in most circumstances than Ryu and the SeaNet code is significantly more compact. Benefit from RDF reasoning, SeaNet is able to achieve O(1) time complexity on different scales of the knowledge graph while the traditional database can achieve O(nlogn) at its best. With the developed network management API, SeaNet enables researchers to develop semantic-intelligent applications on their own SDNs.

Dan Yao, Stephen McLaughlin, Yoann Altmann

This paper presents a new Expectation Propagation (EP) framework for image restoration using patch-based prior distributions. While Monte Carlo techniques are classically used to sample from intractable posterior distributions, they can suffer from scalability issues in high-dimensional inference problems such as image restoration. To address this issue, EP is used here to approximate the posterior distributions using products of multivariate Gaussian densities. Moreover, imposing structural constraints on the covariance matrices of these densities allows for greater scalability and distributed computation. While the method is naturally suited to handle additive Gaussian observation noise, it can also be extended to non-Gaussian noise. Experiments conducted for denoising, inpainting and deconvolution problems with Gaussian and Poisson noise illustrate the potential benefits of such flexible approximate Bayesian method for uncertainty quantification in imaging problems, at a reduced computational cost compared to sampling techniques.

Alice Ruget, Stephen McLaughlin, Robert K. Henderson et al.

Three-dimensional imaging plays an important role in imaging applications where it is necessary to record depth. The number of applications that use depth imaging is increasing rapidly, and examples include self-driving autonomous vehicles and auto-focus assist on smartphone cameras. Light detection and ranging (LIDAR) via single-photon sensitive detector (SPAD) arrays is an emerging technology that enables the acquisition of depth images at high frame rates. However, the spatial resolution of this technology is typically low in comparison to the intensity images recorded by conventional cameras. To increase the native resolution of depth images from a SPAD camera, we develop a deep network built specifically to take advantage of the multiple features that can be extracted from a camera's histogram data. The network is designed for a SPAD camera operating in a dual-mode such that it captures alternate low resolution depth and high resolution intensity images at high frame rates, thus the system does not require any additional sensor to provide intensity images. The network then uses the intensity images and multiple features extracted from downsampled histograms to guide the upsampling of the depth. Our network provides significant image resolution enhancement and image denoising across a wide range of signal-to-noise ratios and photon levels. We apply the network to a range of 3D data, demonstrating denoising and a four-fold resolution enhancement of depth.

Joshua Rapp, Charles Saunders, Julián Tachella et al.

Non-line-of-sight (NLOS) imaging is a rapidly growing field seeking to form images of objects outside the field of view, with potential applications in search and rescue, reconnaissance, and even medical imaging. The critical challenge of NLOS imaging is that diffuse reflections scatter light in all directions, resulting in weak signals and a loss of directional information. To address this problem, we propose a method for seeing around corners that derives angular resolution from vertical edges and longitudinal resolution from the temporal response to a pulsed light source. We introduce an acquisition strategy, scene response model, and reconstruction algorithm that enable the formation of 2.5-dimensional representations -- a plan view plus heights -- and a 180$^{\circ}$ field of view (FOV) for large-scale scenes. Our experiments demonstrate accurate reconstructions of hidden rooms up to 3 meters in each dimension.

Ahmed Karam Eldaly, Yoann Altmann, Ahsan Akram et al.

In this paper, we propose an unsupervised approach for bacterial detection in optical endomicroscopy images. This approach splits each image into a set of overlapping patches and assumes that observed intensities are linear combinations of the actual intensity values associated with background image structures, corrupted by additive Gaussian noise and potentially by a sparse outlier term modelling anomalies (which are considered to be candidate bacteria). The actual intensity term representing background structures is modelled as a linear combination of a few atoms drawn from a dictionary which is learned from bacteria-free data and then fixed while analyzing new images. The bacteria detection task is formulated as a minimization problem and an alternating direction method of multipliers (ADMM) is then used to estimate the unknown parameters. Simulations conducted using two ex vivo lung datasets show good detection and correlation performance between bacteria counts identified by a trained clinician and those of the proposed method.

Antonios Perperidis, Kevin Dhaliwal, Stephen McLaughlin et al.

Endomicroscopy is an emerging imaging modality, that facilitates the acquisition of in vivo, in situ optical biopsies, assisting diagnostic and potentially therapeutic interventions. While there is a diverse and constantly expanding range of commercial and experimental optical biopsy platforms available, fibre-bundle endomicroscopy is currently the most widely used platform and is approved for clinical use in a range of clinical indications. Miniaturised, flexible fibre-bundles, guided through the working channel of endoscopes, needles and catheters, enable high-resolution imaging across a variety of organ systems. Yet, the nature of image acquisition though a fibre-bundle gives rise to several inherent characteristics and limitations necessitating novel and effective image pre- and post-processing algorithms, ranging from image formation, enhancement and mosaicing to pathology detection and quantification. This paper introduces the underlying technology and most prevalent clinical applications of fibre-bundle endomicroscopy, and provides a comprehensive, up-to-date, review of relevant image reconstruction, analysis and understanding/inference methodologies. Furthermore, current limitations as well as future challenges and opportunities in fibre-bundle endomicroscopy computing are identified and discussed.

Ahmed Karam Eldaly, Yoann Altmann, Antonios Perperidis et al.

Optical endomicroscopy (OEM) is an emerging technology platform with preclinical and clinical imaging applications. Pulmonary OEM via fibre bundles has the potential to provide in vivo, in situ molecular signatures of disease such as infection and inflammation. However, enhancing the quality of data acquired by this technique for better visualization and subsequent analysis remains a challenging problem. Cross coupling between fiber cores and sparse sampling by imaging fiber bundles are the main reasons for image degradation, and poor detection performance (i.e., inflammation, bacteria, etc.). In this work, we address the problem of deconvolution and restoration of OEM data. We propose a hierarchical Bayesian model to solve this problem and compare three estimation algorithms to exploit the resulting joint posterior distribution. The first method is based on Markov chain Monte Carlo (MCMC) methods, however, it exhibits a relatively long computational time. The second and third algorithms deal with this issue and are based on a variational Bayes (VB) approach and an alternating direction method of multipliers (ADMM) algorithm respectively. Results on both synthetic and real datasets illustrate the effectiveness of the proposed methods for restoration of OEM images.

Nicolas Dobigeon, Jean-Yves Tourneret, Cédric Richard et al.

When considering the problem of unmixing hyperspectral images, most of the literature in the geoscience and image processing areas relies on the widely used linear mixing model (LMM). However, the LMM may be not valid and other nonlinear models need to be considered, for instance, when there are multi-scattering effects or intimate interactions. Consequently, over the last few years, several significant contributions have been proposed to overcome the limitations inherent in the LMM. In this paper, we present an overview of recent advances in nonlinear unmixing modeling.