CLApr 3, 2025
Task as Context Prompting for Accurate Medical Symptom Coding Using Large Language ModelsChengyang He, Wenlong Zhang, Violet Xinying Chen et al.
Accurate medical symptom coding from unstructured clinical text, such as vaccine safety reports, is a critical task with applications in pharmacovigilance and safety monitoring. Symptom coding, as tailored in this study, involves identifying and linking nuanced symptom mentions to standardized vocabularies like MedDRA, differentiating it from broader medical coding tasks. Traditional approaches to this task, which treat symptom extraction and linking as independent workflows, often fail to handle the variability and complexity of clinical narratives, especially for rare cases. Recent advancements in Large Language Models (LLMs) offer new opportunities but face challenges in achieving consistent performance. To address these issues, we propose Task as Context (TACO) Prompting, a novel framework that unifies extraction and linking tasks by embedding task-specific context into LLM prompts. Our study also introduces SYMPCODER, a human-annotated dataset derived from Vaccine Adverse Event Reporting System (VAERS) reports, and a two-stage evaluation framework to comprehensively assess both symptom linking and mention fidelity. Our comprehensive evaluation of multiple LLMs, including Llama2-chat, Jackalope-7b, GPT-3.5 Turbo, GPT-4 Turbo, and GPT-4o, demonstrates TACO's effectiveness in improving flexibility and accuracy for tailored tasks like symptom coding, paving the way for more specific coding tasks and advancing clinical text processing methodologies.
AIJan 30, 2021
Fairness through Social Welfare OptimizationViolet Xinying Chen, J. N. Hooker
We propose social welfare optimization as a general paradigm for formalizing fairness in AI systems. We argue that optimization models allow formulation of a wide range of fairness criteria as social welfare functions, while enabling AI to take advantage of highly advanced solution technology. Rather than attempting to reduce bias between selected groups, one can achieve equity across all groups by incorporating fairness into the social welfare function. This also allows a fuller accounting of the welfare of the individuals involved. We show how to integrate social welfare optimization with both rule-based AI and machine learning, using either an in-processing or a post-processing approach. We present empirical results from a case study as a preliminary examination of the validity and potential of these integration strategies.
OCAug 24, 2020
Online Convex Optimization Perspective for Learning from Dynamically Revealed PreferencesViolet Xinying Chen, Fatma Kılınç-Karzan
We study the problem of online learning (OL) from revealed preferences: a learner wishes to learn a non-strategic agent's private utility function through observing the agent's utility-maximizing actions in a changing environment. We adopt an online inverse optimization setup, where the learner observes a stream of agent's actions in an online fashion and the learning performance is measured by regret associated with a loss function. We first characterize a special but broad class of agent's utility functions, then utilize this structure in designing a new convex loss function. We establish that the regret with respect to our new loss function also bounds the regret with respect to all other usual loss functions in the literature. This allows us to design a flexible OL framework that enables a unified treatment of loss functions and supports a variety of online convex optimization algorithms. We demonstrate with theoretical and empirical evidence that our framework based on the new loss function (in particular online Mirror Descent) has significant advantages in terms of regret performance and solution time over other OL algorithms from the literature and bypasses the previous technical assumptions as well.
OCJun 10, 2020
Balancing Fairness and Efficiency in an Optimization ModelViolet Xinying Chen, J. N. Hooker
Optimization models generally aim for efficiency by maximizing total benefit or minimizing cost. Yet a trade-off between fairness and efficiency is an important element of many practical decisions. We propose a principled and practical method for balancing these two criteria in an optimization model. Following a critical assessment of existing schemes, we define a set of social welfare functions (SWFs) that combine Rawlsian leximax fairness and utilitarianism and overcome some of the weaknesses of previous approaches. In particular, we regulate the equity/efficiency trade-off with a single parameter that has a meaningful interpretation in practical contexts. We formulate the SWFs using mixed integer constraints and sequentially maximize them subject to constraints that define the problem at hand. After providing practical step-by-step instructions for implementation, we demonstrate the method on problems of realistic size involving healthcare resource allocation and disaster preparation. The solution times are modest, ranging from a fraction of a second to 18 seconds for a given value of the trade-off parameter.