IVFeb 5, 2025Code
Enhancing Free-hand 3D Photoacoustic and Ultrasound Reconstruction using Deep LearningSiYeoul Lee, SeonHo Kim, Minkyung Seo et al.
This study introduces a motion-based learning network with a global-local self-attention module (MoGLo-Net) to enhance 3D reconstruction in handheld photoacoustic and ultrasound (PAUS) imaging. Standard PAUS imaging is often limited by a narrow field of view and the inability to effectively visualize complex 3D structures. The 3D freehand technique, which aligns sequential 2D images for 3D reconstruction, faces significant challenges in accurate motion estimation without relying on external positional sensors. MoGLo-Net addresses these limitations through an innovative adaptation of the self-attention mechanism, which effectively exploits the critical regions, such as fully-developed speckle area or high-echogenic tissue area within successive ultrasound images to accurately estimate motion parameters. This facilitates the extraction of intricate features from individual frames. Additionally, we designed a patch-wise correlation operation to generate a correlation volume that is highly correlated with the scanning motion. A custom loss function was also developed to ensure robust learning with minimized bias, leveraging the characteristics of the motion parameters. Experimental evaluations demonstrated that MoGLo-Net surpasses current state-of-the-art methods in both quantitative and qualitative performance metrics. Furthermore, we expanded the application of 3D reconstruction technology beyond simple B-mode ultrasound volumes to incorporate Doppler ultrasound and photoacoustic imaging, enabling 3D visualization of vasculature. The source code for this study is publicly available at: https://github.com/guhong3648/US3D
CVMar 31, 2025Code
Learned Image Compression and Restoration for Digital PathologySeonYeong Lee, EonSeung Seong, DongEon Lee et al.
Digital pathology images play a crucial role in medical diagnostics, but their ultra-high resolution and large file sizes pose significant challenges for storage, transmission, and real-time visualization. To address these issues, we propose CLERIC, a novel deep learning-based image compression framework designed specifically for whole slide images (WSIs). CLERIC integrates a learnable lifting scheme and advanced convolutional techniques to enhance compression efficiency while preserving critical pathological details. Our framework employs a lifting-scheme transform in the analysis stage to decompose images into low- and high-frequency components, enabling more structured latent representations. These components are processed through parallel encoders incorporating Deformable Residual Blocks (DRB) and Recurrent Residual Blocks (R2B) to improve feature extraction and spatial adaptability. The synthesis stage applies an inverse lifting transform for effective image reconstruction, ensuring high-fidelity restoration of fine-grained tissue structures. We evaluate CLERIC on a digital pathology image dataset and compare its performance against state-of-the-art learned image compression (LIC) models. Experimental results demonstrate that CLERIC achieves superior rate-distortion (RD) performance, significantly reducing storage requirements while maintaining high diagnostic image quality. Our study highlights the potential of deep learning-based compression in digital pathology, facilitating efficient data management and long-term storage while ensuring seamless integration into clinical workflows and AI-assisted diagnostic systems. Code and models are available at: https://github.com/pnu-amilab/CLERIC.
LGDec 7, 2024
AI-powered Digital Twin of the Ocean: Reliable Uncertainty Quantification for Real-time Wave Height Prediction with Deep EnsembleDongeon Lee, Sunwoong Yang, Jae-Won Oh et al.
Environmental pollution and fossil fuel depletion have prompted the need for renewable energy-based power generation. However, its stability is often challenged by low energy density and non-stationary conditions. Wave energy converters (WECs), in particular, need reliable real-time wave height prediction to address these issues caused by irregular wave patterns, which can lead to the inefficient and unstable operation of WECs. In this study, we propose an AI-powered reliable real-time wave height prediction model that integrates long short-term memory (LSTM) networks for temporal prediction with deep ensemble (DE) for robust uncertainty quantification (UQ), ensuring high accuracy and reliability. To further enhance the reliability, uncertainty calibration is applied, which has proven to significantly improve the quality of the quantified uncertainty. Using real operational data from an oscillating water column-wave energy converter (OWC-WEC) system in Jeju, South Korea, the model achieves notable accuracy (R2 > 0.9), while increasing uncertainty quality by over 50% through simple calibration technique. Furthermore, a comprehensive parametric study is conducted to explore the effects of key model hyperparameters, offering valuable guidelines for diverse operational scenarios, characterized by differences in wavelength, amplitude, and period. These results demonstrate the model's capability to deliver reliable predictions, facilitating digital twin of the ocean.