Shihui Ying

Yifan Feng, Jiangang Huang, Shaoyi Du et al.

We introduce Hyper-YOLO, a new object detection method that integrates hypergraph computations to capture the complex high-order correlations among visual features. Traditional YOLO models, while powerful, have limitations in their neck designs that restrict the integration of cross-level features and the exploitation of high-order feature interrelationships. To address these challenges, we propose the Hypergraph Computation Empowered Semantic Collecting and Scattering (HGC-SCS) framework, which transposes visual feature maps into a semantic space and constructs a hypergraph for high-order message propagation. This enables the model to acquire both semantic and structural information, advancing beyond conventional feature-focused learning. Hyper-YOLO incorporates the proposed Mixed Aggregation Network (MANet) in its backbone for enhanced feature extraction and introduces the Hypergraph-Based Cross-Level and Cross-Position Representation Network (HyperC2Net) in its neck. HyperC2Net operates across five scales and breaks free from traditional grid structures, allowing for sophisticated high-order interactions across levels and positions. This synergy of components positions Hyper-YOLO as a state-of-the-art architecture in various scale models, as evidenced by its superior performance on the COCO dataset. Specifically, Hyper-YOLO-N significantly outperforms the advanced YOLOv8-N and YOLOv9-T with 12\% $\text{AP}^{val}$ and 9\% $\text{AP}^{val}$ improvements. The source codes are at ttps://github.com/iMoonLab/Hyper-YOLO.

Yaqian Guo, Xin Wang, Ce Li et al.

Scene segmentation is widely used in the field of autonomous driving for environment perception, and semantic scene segmentation (3S) has received a great deal of attention due to the richness of the semantic information it contains. It aims to assign labels to pixels in an image, thus enabling automatic image labeling. Current approaches are mainly based on convolutional neural networks (CNN), but they rely on a large number of labels. Therefore, how to use a small size of labeled data to achieve semantic segmentation becomes more and more important. In this paper, we propose a domain adaptation (DA) framework based on optimal transport (OT) and attention mechanism to address this issue. Concretely, first we generate the output space via CNN due to its superiority of feature representation. Second, we utilize OT to achieve a more robust alignment of source and target domains in output space, where the OT plan defines a well attention mechanism to improve the adaptation of the model. In particular, with OT, the number of network parameters has been reduced and the network has been better interpretable. Third, to better describe the multi-scale property of features, we construct a multi-scale segmentation network to perform domain adaptation. Finally, in order to verify the performance of our proposed method, we conduct experimental comparison with three benchmark and four SOTA methods on three scene datasets, and the mean intersection-over-union (mIOU) has been significant improved, and visualization results under multiple domain adaptation scenarios also show that our proposed method has better performance than compared semantic segmentation methods.

Zizhao Zhang, Yifan Feng, Shihui Ying et al.

Learning on high-order correlation has shown superiority in data representation learning, where hypergraph has been widely used in recent decades. The performance of hypergraph-based representation learning methods, such as hypergraph neural networks, highly depends on the quality of the hypergraph structure. How to generate the hypergraph structure among data is still a challenging task. Missing and noisy data may lead to "bad connections" in the hypergraph structure and destroy the hypergraph-based representation learning process. Therefore, revealing the high-order structure, i.e., the hypergraph behind the observed data, becomes an urgent but important task. To address this issue, we design a general paradigm of deep hypergraph structure learning, namely DeepHGSL, to optimize the hypergraph structure for hypergraph-based representation learning. Concretely, inspired by the information bottleneck principle for the robustness issue, we first extend it to the hypergraph case, named by the hypergraph information bottleneck (HIB) principle. Then, we apply this principle to guide the hypergraph structure learning, where the HIB is introduced to construct the loss function to minimize the noisy information in the hypergraph structure. The hypergraph structure can be optimized and this process can be regarded as enhancing the correct connections and weakening the wrong connections in the training phase. Therefore, the proposed method benefits to extract more robust representations even on a heavily noisy structure. Finally, we evaluate the model on four benchmark datasets for representation learning. The experimental results on both graph- and hypergraph-structured data demonstrate the effectiveness and robustness of our method compared with other state-of-the-art methods.

Jian Wang, Liang Qiao, Shichong Zhou et al.

Deep learning (DL) has proven highly effective for ultrasound-based computer-aided diagnosis (CAD) of breast cancers. In an automaticCAD system, lesion detection is critical for the following diagnosis. However, existing DL-based methods generally require voluminous manually-annotated region of interest (ROI) labels and class labels to train both the lesion detection and diagnosis models. In clinical practice, the ROI labels, i.e. ground truths, may not always be optimal for the classification task due to individual experience of sonologists, resulting in the issue of coarse annotation that limits the diagnosis performance of a CAD model. To address this issue, a novel Two-Stage Detection and Diagnosis Network (TSDDNet) is proposed based on weakly supervised learning to enhance diagnostic accuracy of the ultrasound-based CAD for breast cancers. In particular, all the ROI-level labels are considered as coarse labels in the first training stage, and then a candidate selection mechanism is designed to identify optimallesion areas for both the fully and partially annotated samples. It refines the current ROI-level labels in the fully annotated images and the detected ROIs in the partially annotated samples with a weakly supervised manner under the guidance of class labels. In the second training stage, a self-distillation strategy further is further proposed to integrate the detection network and classification network into a unified framework as the final CAD model for joint optimization, which then further improves the diagnosis performance. The proposed TSDDNet is evaluated on a B-mode ultrasound dataset, and the experimental results show that it achieves the best performance on both lesion detection and diagnosis tasks, suggesting promising application potential.

Hanhui Yang, Juncheng Li, Lok Ming Lui et al.

Fast and accurate MRI reconstruction is a key concern in modern clinical practice. Recently, numerous Deep-Learning methods have been proposed for MRI reconstruction, however, they usually fail to reconstruct sharp details from the subsampled k-space data. To solve this problem, we propose a lightweight and accurate Edge Attention MRI Reconstruction Network (EAMRI) to reconstruct images with edge guidance. Specifically, we design an efficient Edge Prediction Network to directly predict accurate edges from the blurred image. Meanwhile, we propose a novel Edge Attention Module (EAM) to guide the image reconstruction utilizing the extracted edge priors, as inspired by the popular self-attention mechanism. EAM first projects the input image and edges into Q_image, K_edge, and V_image, respectively. Then EAM pairs the Q_image with K_edge along the channel dimension, such that 1) it can search globally for the high-frequency image features that are activated by the edge priors; 2) the overall computation burdens are largely reduced compared with the traditional spatial-wise attention. With the help of EAM, the predicted edge priors can effectively guide the model to reconstruct high-quality MR images with accurate edges. Extensive experiments show that our proposed EAMRI outperforms other methods with fewer parameters and can recover more accurate edges.

Jun Shi, Yuanming Zhang, Zheng Li et al.

Computer-aided diagnosis (CAD) can help pathologists improve diagnostic accuracy together with consistency and repeatability for cancers. However, the CAD models trained with the histopathological images only from a single center (hospital) generally suffer from the generalization problem due to the straining inconsistencies among different centers. In this work, we propose a pseudo-data based self-supervised federated learning (FL) framework, named SSL-FT-BT, to improve both the diagnostic accuracy and generalization of CAD models. Specifically, the pseudo histopathological images are generated from each center, which contains inherent and specific properties corresponding to the real images in this center, but does not include the privacy information. These pseudo images are then shared in the central server for self-supervised learning (SSL). A multi-task SSL is then designed to fully learn both the center-specific information and common inherent representation according to the data characteristics. Moreover, a novel Barlow Twins based FL (FL-BT) algorithm is proposed to improve the local training for the CAD model in each center by conducting contrastive learning, which benefits the optimization of the global model in the FL procedure. The experimental results on three public histopathological image datasets indicate the effectiveness of the proposed SSL-FL-BT on both diagnostic accuracy and generalization.

Yifan Feng, Jiashu Han, Shihui Ying et al.

The isomorphism problem is a fundamental problem in network analysis, which involves capturing both low-order and high-order structural information. In terms of extracting low-order structural information, graph isomorphism algorithms analyze the structural equivalence to reduce the solver space dimension, which demonstrates its power in many applications, such as protein design, chemical pathways, and community detection. For the more commonly occurring high-order relationships in real-life scenarios, the problem of hypergraph isomorphism, which effectively captures these high-order structural relationships, cannot be straightforwardly addressed using graph isomorphism methods. Besides, the existing hypergraph kernel methods may suffer from high memory consumption or inaccurate sub-structure identification, thus yielding sub-optimal performance. In this paper, to address the abovementioned problems, we first propose the hypergraph Weisfiler-Lehman test algorithm for the hypergraph isomorphism test problem by generalizing the Weisfiler-Lehman test algorithm from graphs to hypergraphs. Secondly, based on the presented algorithm, we propose a general hypergraph Weisfieler-Lehman kernel framework and implement two instances, which are Hypergraph Weisfeiler-Lehamn Subtree Kernel and Hypergraph Weisfeiler-Lehamn Hyperedge Kernel. In order to fulfill our research objectives, a comprehensive set of experiments was meticulously designed, including seven graph classification datasets and 12 hypergraph classification datasets. Results on hypergraph classification datasets show significant improvements compared to other typical kernel-based methods, which demonstrates the effectiveness of the proposed methods. In our evaluation, we found that our proposed methods outperform the second-best method in terms of runtime, running over 80 times faster when handling complex hypergraph structures.

Jie Hou, Zhiying Ma, Shihui Ying et al.

Neural network solvers represent an innovative and promising approach for tackling time-fractional partial differential equations by utilizing deep learning techniques. L1 interpolation approximation serves as the standard method for addressing time-fractional derivatives within neural network solvers. However, we have discovered that neural network solvers based on L1 interpolation approximation are unable to fully exploit the benefits of neural networks, and the accuracy of these models is constrained to interpolation errors. In this paper, we present the high-precision Hermite Neural Solver (HNS) for solving time-fractional partial differential equations. Specifically, we first construct a high-order explicit approximation scheme for fractional derivatives using Hermite interpolation techniques, and rigorously analyze its approximation accuracy. Afterward, taking into account the infinitely differentiable properties of deep neural networks, we integrate the high-order Hermite interpolation explicit approximation scheme with deep neural networks to propose the HNS. The experimental results show that HNS achieves higher accuracy than methods based on the L1 scheme for both forward and inverse problems, as well as in high-dimensional scenarios. This indicates that HNS has significantly improved accuracy and flexibility compared to existing L1-based methods, and has overcome the limitations of explicit finite difference approximation methods that are often constrained to function value interpolation. As a result, the HNS is not a simple combination of numerical computing methods and neural networks, but rather achieves a complementary and mutually reinforcing advantages of both approaches. The data and code can be found at \url{https://github.com/hsbhc/HNS}.

Mengqi Lei, Guohuan Xie, Shihui Ying et al.

Large language models (LLMs) have recently shown strong potential in modeling relational structures. However, existing approaches remain fundamentally graph-centric: they focus on processing pairwise graph structures into tokens that LLMs can understand. In contrast, many real-world relational patterns do not naturally conform to the pairwise-edge assumption, and are better modeled as high-order associations in hypergraphs. For hypergraph structures, existing methods often fail to preserve the native semantics that multiple objects are jointly connected by the same high-order relation, limiting their ability to exploit complex structures. To address this limitation, we put forth the "Hypergraph as Language" perspective and propose Hyper-Align, a hypergraph-native alignment framework for large language models. Hyper-Align compiles the query-object-centered hypergraph context into hypergraph tokens directly consumable by a base LLM. Specifically, we introduce Hypergraph Incidence Detail Template with Overview (HIDT-O), which serializes high-order association structures into a fixed-shape hybrid template combining local incidence details and overview-level summaries. We then design a Hypergraph Incidence Projector (HIP), which maps native high-order incidence structures into the LLM token space through explicit semantic-structural decoupling and bidirectional message passing between vertices and hyperedges. We further define a concrete Hypergraph-as-Language input protocol, which jointly feeds hypergraph tokens and textual prompts into a frozen base LLM, supporting both vertex-level and hyperedge-level tasks under a unified question-answering paradigm. To systematically evaluate different methods in hypergraph structural modeling, we introduce HyperAlign-Bench. Extensive experiments show that Hyper-Align significantly outperforms existing methods across in-domain and zero-shot evaluations.

Lili Bao, Jiahao Lu, Shihui Ying et al.

In this paper, we propose a new approach to deformable image registration that captures sliding motions. The large deformation diffeomorphic metric mapping (LDDMM) registration method faces challenges in representing sliding motion since it per construction generates smooth warps. To address this issue, we extend LDDMM by incorporating both zeroth- and first-order momenta with a non-differentiable kernel. This allows to represent both discontinuous deformation at switching boundaries and diffeomorphic deformation in homogeneous regions. We provide a mathematical analysis of the proposed deformation model from the viewpoint of discontinuous systems. To evaluate our approach, we conduct experiments on both artificial images and the publicly available DIR-Lab 4DCT dataset. Results show the effectiveness of our approach in capturing plausible sliding motion.

Rizhuo Huang, Yifan Feng, Rundong Xue et al.

Knowledge hypergraphs surpass traditional binary knowledge graphs by encapsulating complex $n$-ary atomic facts, providing a more comprehensive paradigm for semantic representation. However, constructing high-quality hypergraphs remains challenging due to the \textit{scenario gap}: generic extractors struggle to generalize across diverse domains with specific jargon, while existing methods often fail to balance structural skeletons with fine-grained details. To bridge this gap, we propose \textbf{Hyper-KGGen}, a skill-driven framework that reformulates extraction as a dynamic skill-evolving process. First, Hyper-KGGen employs a \textit{coarse-to-fine} mechanism to systematically decompose documents, ensuring full-dimensional coverage from binary links to complex hyperedges. Crucially, it incorporates an \textit{adaptive skill acquisition} module that actively distills domain expertise into a Global Skill Library. This is achieved via a stability-based feedback loop, where extraction stability serves as a relative reward signal to induce high-quality skills from unstable traces and missed predictions. Additionally, we present \textbf{HyperDocRED}, a rigorously annotated benchmark for document-level knowledge hypergraph extraction. Experiments demonstrate that Hyper-KGGen significantly outperforms strong baselines, validating that evolved skills provide substantially richer guidance than static few-shot examples in multi-scenario settings.

Yifan Feng, Chengwu Yang, Xingliang Hou et al.

Existing benchmarks like NLGraph and GraphQA evaluate LLMs on graphs by focusing mainly on pairwise relationships, overlooking the high-order correlations found in real-world data. Hypergraphs, which can model complex beyond-pairwise relationships, offer a more robust framework but are still underexplored in the context of LLMs. To address this gap, we introduce LLM4Hypergraph, the first comprehensive benchmark comprising 21,500 problems across eight low-order, five high-order, and two isomorphism tasks, utilizing both synthetic and real-world hypergraphs from citation networks and protein structures. We evaluate six prominent LLMs, including GPT-4o, demonstrating our benchmark's effectiveness in identifying model strengths and weaknesses. Our specialized prompting framework incorporates seven hypergraph languages and introduces two novel techniques, Hyper-BAG and Hyper-COT, which enhance high-order reasoning and achieve an average 4% (up to 9%) performance improvement on structure classification tasks. This work establishes a foundational testbed for integrating hypergraph computational capabilities into LLMs, advancing their comprehension. The source codes are at https://github.com/iMoonLab/LLM4Hypergraph.

Shengdong Zhang, Fan Jia, Xiang Li et al.

Few-shot semantic segmentation (FSS) methods have shown great promise in handling data-scarce scenarios, particularly in medical image segmentation tasks. However, most existing FSS architectures lack sufficient interpretability and fail to fully incorporate the underlying physical structures of semantic regions. To address these issues, in this paper, we propose a novel deep unfolding network, called the Learned Mumford-Shah Network (LMS-Net), for the FSS task. Specifically, motivated by the effectiveness of pixel-to-prototype comparison in prototypical FSS methods and the capability of deep priors to model complex spatial structures, we leverage our learned Mumford-Shah model (LMS model) as a mathematical foundation to integrate these insights into a unified framework. By reformulating the LMS model into prototype update and mask update tasks, we propose an alternating optimization algorithm to solve it efficiently. Further, the iterative steps of this algorithm are unfolded into corresponding network modules, resulting in LMS-Net with clear interpretability. Comprehensive experiments on three publicly available medical segmentation datasets verify the effectiveness of our method, demonstrating superior accuracy and robustness in handling complex structures and adapting to challenging segmentation scenarios. These results highlight the potential of LMS-Net to advance FSS in medical imaging applications. Our code will be available at: https://github.com/SDZhang01/LMSNet

Lili Bao, Bin Xiao, Shihui Ying et al.

In this paper, we propose a novel mathematical framework for piecewise diffeomorphic image registration that involves discontinuous sliding motion using a diffeomorphism groupoid and algebroid approach. The traditional Large Deformation Diffeomorphic Metric Mapping (LDDMM) registration method builds on Lie groups, which assume continuity and smoothness in velocity fields, limiting its applicability in handling discontinuous sliding motion. To overcome this limitation, we extend the diffeomorphism Lie groups to a framework of discontinuous diffeomorphism Lie groupoids, allowing for discontinuities along sliding boundaries while maintaining diffeomorphism within homogeneous regions. We provide a rigorous analysis of the associated mathematical structures, including Lie algebroids and their duals, and derive specific Euler-Arnold equations to govern optimal flows for discontinuous deformations. Some numerical tests are performed to validate the efficiency of the proposed approach.

Yifan Feng, Yihe Luo, Shihui Ying et al.

Hypergraph Neural Networks (HGNNs) have recently attracted much attention and exhibited satisfactory performance due to their superiority in high-order correlation modeling. However, it is noticed that the high-order modeling capability of hypergraph also brings increased computation complexity, which hinders its practical industrial deployment. In practice, we find that one key barrier to the efficient deployment of HGNNs is the high-order structural dependencies during inference. In this paper, we propose to bridge the gap between the HGNNs and inference-efficient Multi-Layer Perceptron (MLPs) to eliminate the hypergraph dependency of HGNNs and thus reduce computational complexity as well as improve inference speed. Specifically, we introduce LightHGNN and LightHGNN$^+$ for fast inference with low complexity. LightHGNN directly distills the knowledge from teacher HGNNs to student MLPs via soft labels, and LightHGNN$^+$ further explicitly injects reliable high-order correlations into the student MLPs to achieve topology-aware distillation and resistance to over-smoothing. Experiments on eight hypergraph datasets demonstrate that even without hypergraph dependency, the proposed LightHGNNs can still achieve competitive or even better performance than HGNNs and outperform vanilla MLPs by $16.3$ on average. Extensive experiments on three graph datasets further show the average best performance of our LightHGNNs compared with all other methods. Experiments on synthetic hypergraphs with 5.5w vertices indicate LightHGNNs can run $100\times$ faster than HGNNs, showcasing their ability for latency-sensitive deployments.

Hao Zhang, Qi Wang, Jun Shi et al.

Multi-modal Magnetic Resonance Imaging (MRI) offers complementary diagnostic information, but some modalities are limited by the long scanning time. To accelerate the whole acquisition process, MRI reconstruction of one modality from highly undersampled k-space data with another fully-sampled reference modality is an efficient solution. However, the misalignment between modalities, which is common in clinic practice, can negatively affect reconstruction quality. Existing deep learning-based methods that account for inter-modality misalignment perform better, but still share two main common limitations: (1) The spatial alignment task is not adaptively integrated with the reconstruction process, resulting in insufficient complementarity between the two tasks; (2) the entire framework has weak interpretability. In this paper, we construct a novel Deep Unfolding Network with Spatial Alignment, termed DUN-SA, to appropriately embed the spatial alignment task into the reconstruction process. Concretely, we derive a novel joint alignment-reconstruction model with a specially designed cross-modal spatial alignment term. By relaxing the model into cross-modal spatial alignment and multi-modal reconstruction tasks, we propose an effective algorithm to solve this model alternatively. Then, we unfold the iterative steps of the proposed algorithm and design corresponding network modules to build DUN-SA with interpretability. Through end-to-end training, we effectively compensate for spatial misalignment using only reconstruction loss, and utilize the progressively aligned reference modality to provide inter-modality prior to improve the reconstruction of the target modality. Comprehensive experiments on three real datasets demonstrate that our method exhibits superior reconstruction performance compared to state-of-the-art methods.

Yifan Feng, Hao Hu, Xingliang Hou et al.

Large language models (LLMs) have transformed various sectors, including education, finance, and medicine, by enhancing content generation and decision-making processes. However, their integration into the medical field is cautious due to hallucinations, instances where generated content deviates from factual accuracy, potentially leading to adverse outcomes. To address this, we introduce Hyper-RAG, a hypergraph-driven Retrieval-Augmented Generation method that comprehensively captures both pairwise and beyond-pairwise correlations in domain-specific knowledge, thereby mitigating hallucinations. Experiments on the NeurologyCrop dataset with six prominent LLMs demonstrated that Hyper-RAG improves accuracy by an average of 12.3% over direct LLM use and outperforms Graph RAG and Light RAG by 6.3% and 6.0%, respectively. Additionally, Hyper-RAG maintained stable performance with increasing query complexity, unlike existing methods which declined. Further validation across nine diverse datasets showed a 35.5% performance improvement over Light RAG using a selection-based assessment. The lightweight variant, Hyper-RAG-Lite, achieved twice the retrieval speed and a 3.3% performance boost compared with Light RAG. These results confirm Hyper-RAG's effectiveness in enhancing LLM reliability and reducing hallucinations, making it a robust solution for high-stakes applications like medical diagnostics.

Murong Yang, Shihui Ying, Xin-Jian Xu et al.

Graph-based multi-view spectral clustering methods have achieved notable progress recently, yet they often fall short in either oversimplifying pairwise relationships or struggling with inefficient spectral decompositions in high-dimensional Euclidean spaces. In this paper, we introduce a novel approach that begins to generate hypergraphs by leveraging sparse representation learning from data points. Based on the generated hypergraph, we propose an optimization function with orthogonality constraints for multi-view hypergraph spectral clustering, which incorporates spectral clustering for each view and ensures consistency across different views. In Euclidean space, solving the orthogonality-constrained optimization problem may yield local maxima and approximation errors. Innovately, we transform this problem into an unconstrained form on the Grassmannian manifold. Finally, we devise an alternating iterative Riemannian optimization algorithm to solve the problem. To validate the effectiveness of the proposed algorithm, we test it on four real-world multi-view datasets and compare its performance with seven state-of-the-art multi-view clustering algorithms. The experimental results demonstrate that our method outperforms the baselines in terms of clustering performance due to its superior low-dimensional and resilient feature representation.

Yuandi Zhao, Qianxi Xia, Yang Sun et al.

In recent years, the remarkable success of deep neural networks (DNNs) in computer vision is largely due to large-scale, high-quality labeled datasets. Training directly on real-world datasets with label noise may result in overfitting. The traditional method is limited to deal with closed set label noise, where noisy training data has true class labels within the known label space. However, there are some real-world datasets containing open set label noise, which means that some samples belong to an unknown class outside the known label space. To address the open set label noise problem, we introduce a method based on Robust Sample Selection and Margin-Guided Module (RSS-MGM). Firstly, unlike the prior clean sample selection approach, which only select a limited number of clean samples, a robust sample selection module combines small loss selection or high-confidence sample selection to obtain more clean samples. Secondly, to efficiently distinguish open set label noise and closed set ones, margin functions are designed to filter open-set data and closed set data. Thirdly, different processing methods are selected for different types of samples in order to fully utilize the data's prior information and optimize the whole model. Furthermore, extensive experimental results with noisy labeled data from benchmark datasets and real-world datasets, such as CIFAR-100N-C, CIFAR80N-O, WebFG-469, and Food101N, indicate that our approach outperforms many state-of-the-art label noise learning methods. Especially, it can more accurately divide open set label noise samples and closed set ones.

Hao Zhang, Qi Wang, Jian Sun et al.

Magnetic Resonance Imaging (MRI) is widely used in clinical practice, but suffered from prolonged acquisition time. Although deep learning methods have been proposed to accelerate acquisition and demonstrate promising performance, they rely on high-quality fully-sampled datasets for training in a supervised manner. However, such datasets are time-consuming and expensive-to-collect, which constrains their broader applications. On the other hand, self-supervised methods offer an alternative by enabling learning from under-sampled data alone, but most existing methods rely on further partitioned under-sampled k-space data as model's input for training, resulting in a loss of valuable information. Additionally, their models have not fully incorporated image priors, leading to degraded reconstruction performance. In this paper, we propose a novel re-visible dual-domain self-supervised deep unfolding network to address these issues when only under-sampled datasets are available. Specifically, by incorporating re-visible dual-domain loss, all under-sampled k-space data are utilized during training to mitigate information loss caused by further partitioning. This design enables the model to implicitly adapt to all under-sampled k-space data as input. Additionally, we design a deep unfolding network based on Chambolle and Pock Proximal Point Algorithm (DUN-CP-PPA) to achieve end-to-end reconstruction, incorporating imaging physics and image priors to guide the reconstruction process. By employing a Spatial-Frequency Feature Extraction (SFFE) block to capture global and local feature representation, we enhance the model's efficiency to learn comprehensive image priors. Experiments conducted on the fastMRI and IXI datasets demonstrate that our method significantly outperforms state-of-the-art approaches in terms of reconstruction performance.

Murong Yang, Shihui Ying, Yue Gao et al.

Although hypergraph neural networks (HGNNs) have emerged as a powerful framework for analyzing complex datasets, their practical performance often remains limited. On one hand, existing networks typically employ a single type of attention mechanism, focusing on either structural or feature similarities during message passing. On the other hand, assuming that all nodes in current hypergraph models have the same level of overlap may lead to suboptimal generalization. To overcome these limitations, we propose a novel framework, overlap-aware meta-learning attention for hypergraph neural networks (OMA-HGNN). First, we introduce a hypergraph attention mechanism that integrates both structural and feature similarities. Specifically, we linearly combine their respective losses with weighted factors for the HGNN model. Second, we partition nodes into different tasks based on their diverse overlap levels and develop a multi-task Meta-Weight-Net (MWN) to determine the corresponding weighted factors. Third, we jointly train the internal MWN model with the losses from the external HGNN model and train the external model with the weighted factors from the internal model. To evaluate the effectiveness of OMA-HGNN, we conducted experiments on six real-world datasets and benchmarked its perfor-mance against nine state-of-the-art methods for node classification. The results demonstrate that OMA-HGNN excels in learning superior node representations and outperforms these baselines.

Saisai Ding, Juncheng Li, Jun Wang et al.

The multi-scale information among the whole slide images (WSIs) is essential for cancer diagnosis. Although the existing multi-scale vision Transformer has shown its effectiveness for learning multi-scale image representation, it still cannot work well on the gigapixel WSIs due to their extremely large image sizes. To this end, we propose a novel Multi-scale Efficient Graph-Transformer (MEGT) framework for WSI classification. The key idea of MEGT is to adopt two independent Efficient Graph-based Transformer (EGT) branches to process the low-resolution and high-resolution patch embeddings (i.e., tokens in a Transformer) of WSIs, respectively, and then fuse these tokens via a multi-scale feature fusion module (MFFM). Specifically, we design an EGT to efficiently learn the local-global information of patch tokens, which integrates the graph representation into Transformer to capture spatial-related information of WSIs. Meanwhile, we propose a novel MFFM to alleviate the semantic gap among different resolution patches during feature fusion, which creates a non-patch token for each branch as an agent to exchange information with another branch by cross-attention. In addition, to expedite network training, a novel token pruning module is developed in EGT to reduce the redundant tokens. Extensive experiments on TCGA-RCC and CAMELYON16 datasets demonstrate the effectiveness of the proposed MEGT.

Qi Wang, Zhijie Wen, Jun Shi et al.

Multi-modal magnetic resonance imaging (MRI) plays a crucial role in comprehensive disease diagnosis in clinical medicine. However, acquiring certain modalities, such as T2-weighted images (T2WIs), is time-consuming and prone to be with motion artifacts. It negatively impacts subsequent multi-modal image analysis. To address this issue, we propose an end-to-end deep learning framework that utilizes T1-weighted images (T1WIs) as auxiliary modalities to expedite T2WIs' acquisitions. While image pre-processing is capable of mitigating misalignment, improper parameter selection leads to adverse pre-processing effects, requiring iterative experimentation and adjustment. To overcome this shortage, we employ Optimal Transport (OT) to synthesize T2WIs by aligning T1WIs and performing cross-modal synthesis, effectively mitigating spatial misalignment effects. Furthermore, we adopt an alternating iteration framework between the reconstruction task and the cross-modal synthesis task to optimize the final results. Then, we prove that the reconstructed T2WIs and the synthetic T2WIs become closer on the T2 image manifold with iterations increasing, and further illustrate that the improved reconstruction result enhances the synthesis process, whereas the enhanced synthesis result improves the reconstruction process. Finally, experimental results from FastMRI and internal datasets confirm the effectiveness of our method, demonstrating significant improvements in image reconstruction quality even at low sampling rates.