Herman Bergström

Herman Bergström, Aditya Mehrotra, Rahul G. Krishnan

We introduce CoMET, \textit{\textbf{C}omposing \textbf{M}odality \textbf{E}ncoders with \textbf{T}abular foundation models}, a simple yet highly competitive method for multimodal classification: pass each modality through a frozen pre-trained backbone, compress the resulting embeddings with PCA, and concatenate as input into a Tabular Foundation Model (TFM) for prediction. We show that PCA alone suffices to act as an adaptor yielding strong, robust performance across modalities. When the \texttt{CLS} tokens of the foundation model align poorly with downstream tasks, we propose \textbf{PALPooling}, a lightweight adaptive token pooler that consistently improves representation quality. By composing strong frozen representation learning backbones with TFMs, our approach achieves state-of-the-art results across diverse multimodal benchmarks without any training. On hierarchical tasks with large fine-grained class spaces, our approach enables fast and scalable classification, handling datasets with over 500,000 samples and 2,000 classes without any fine-tuning. Overall, our results show that the composition of foundation models is a simple, yet powerful, out-of-the-box solution for multimodal learning, challenging the necessity of complex, end-to-end training pipelines for new problems.

Herman Bergström, Emil Carlsson, Devdatt Dubhashi et al.

Learning an ordering of items based on pairwise comparisons is useful when items are difficult to rate consistently on an absolute scale, for example, when annotators have to make subjective assessments. When exhaustive comparison is infeasible, actively sampling item pairs can reduce the number of annotations necessary for learning an accurate ordering. However, many algorithms ignore shared structure between items, limiting their sample efficiency and precluding generalization to new items. It is also common to disregard how noise in comparisons varies between item pairs, despite it being informative of item similarity. In this work, we study active preference learning for ordering items with contextual attributes, both in- and out-of-sample. We give an upper bound on the expected ordering error of a logistic preference model as a function of which items have been compared. Next, we propose an active learning strategy that samples items to minimize this bound by accounting for aleatoric and epistemic uncertainty in comparisons. We evaluate the resulting algorithm, and a variant aimed at reducing model misspecification, in multiple realistic ordering tasks with comparisons made by human annotators. Our results demonstrate superior sample efficiency and generalization compared to non-contextual ranking approaches and active preference learning baselines.

Herman Bergström, Zhongqi Yue, Fredrik D. Johansson

Medical images used to train machine learning models are often accompanied by radiology reports containing rich expert annotations. However, relying on these reports as inputs for clinical prediction requires the timely manual work of a trained radiologist. This raises a natural question: when can radiology reports be leveraged during training to improve image-only classification? Prior works are limited to evaluating pre-trained image representations by fine-tuning them to predict diagnostic labels, often extracted from reports, ignoring tasks with labels that are weakly associated with the text. To address this gap, we conduct a systematic study of how radiology reports can be used during both pre-training and fine-tuning, across diagnostic and prognostic tasks (e.g., 12-month readmission), and under varying training set sizes. Our findings reveal that: (1) Leveraging reports during pre-training is beneficial for downstream classification tasks where the label is well-represented in the text; however, pre-training through explicit image-text alignment can be detrimental in settings where it's not; (2) Fine-tuning with reports can lead to significant improvements and even have a larger impact than the pre-training method in certain settings. These results provide actionable insights into when and how to leverage privileged text data to train medical image classifiers while highlighting gaps in current research.