TOE: A Grid-Tagging Discontinuous NER Model Enhanced by Embedding Tag/Word Relations and More Fine-Grained TagsJiang Liu, Donghong Ji, Jingye Li et al.
So far, discontinuous named entity recognition (NER) has received increasing research attention and many related methods have surged such as hypergraph-based methods, span-based methods, and sequence-to-sequence (Seq2Seq) methods, etc. However, these methods more or less suffer from some problems such as decoding ambiguity and efficiency, which limit their performance. Recently, grid-tagging methods, which benefit from the flexible design of tagging systems and model architectures, have shown superiority to adapt for various information extraction tasks. In this paper, we follow the line of such methods and propose a competitive grid-tagging model for discontinuous NER. We call our model TOE because we incorporate two kinds of Tag-Oriented Enhancement mechanisms into a state-of-the-art (SOTA) grid-tagging model that casts the NER problem into word-word relationship prediction. First, we design a Tag Representation Embedding Module (TREM) to force our model to consider not only word-word relationships but also word-tag and tag-tag relationships. Concretely, we construct tag representations and embed them into TREM, so that TREM can treat tag and word representations as queries/keys/values and utilize self-attention to model their relationships. On the other hand, motivated by the Next-Neighboring-Word (NNW) and Tail-Head-Word (THW) tags in the SOTA model, we add two new symmetric tags, namely Previous-Neighboring-Word (PNW) and Head-Tail-Word (HTW), to model more fine-grained word-word relationships and alleviate error propagation from tag prediction. In the experiments of three benchmark datasets, namely CADEC, ShARe13 and ShARe14, our TOE model pushes the SOTA results by about 0.83%, 0.05% and 0.66% in F1, demonstrating its effectiveness.
1.3CLJun 6, 2023
TKDP: Threefold Knowledge-enriched Deep Prompt Tuning for Few-shot Named Entity RecognitionJiang Liu, Hao Fei, Fei Li et al.
Few-shot named entity recognition (NER) exploits limited annotated instances to identify named mentions. Effectively transferring the internal or external resources thus becomes the key to few-shot NER. While the existing prompt tuning methods have shown remarkable few-shot performances, they still fail to make full use of knowledge. In this work, we investigate the integration of rich knowledge to prompt tuning for stronger few-shot NER. We propose incorporating the deep prompt tuning framework with threefold knowledge (namely TKDP), including the internal 1) context knowledge and the external 2) label knowledge & 3) sememe knowledge. TKDP encodes the three feature sources and incorporates them into the soft prompt embeddings, which are further injected into an existing pre-trained language model to facilitate predictions. On five benchmark datasets, our knowledge-enriched model boosts by at most 11.53% F1 over the raw deep prompt method, and significantly outperforms 8 strong-performing baseline systems in 5-/10-/20-shot settings, showing great potential in few-shot NER. Our TKDP can be broadly adapted to other few-shot tasks without effort.
ORGAN: Observation-Guided Radiology Report Generation via Tree ReasoningWenjun Hou, Kaishuai Xu, Yi Cheng et al.
This paper explores the task of radiology report generation, which aims at generating free-text descriptions for a set of radiographs. One significant challenge of this task is how to correctly maintain the consistency between the images and the lengthy report. Previous research explored solving this issue through planning-based methods, which generate reports only based on high-level plans. However, these plans usually only contain the major observations from the radiographs (e.g., lung opacity), lacking much necessary information, such as the observation characteristics and preliminary clinical diagnoses. To address this problem, the system should also take the image information into account together with the textual plan and perform stronger reasoning during the generation process. In this paper, we propose an observation-guided radiology report generation framework (ORGAN). It first produces an observation plan and then feeds both the plan and radiographs for report generation, where an observation graph and a tree reasoning mechanism are adopted to precisely enrich the plan information by capturing the multi-formats of each observation. Experimental results demonstrate that our framework outperforms previous state-of-the-art methods regarding text quality and clinical efficacy
RECAP: Towards Precise Radiology Report Generation via Dynamic Disease Progression ReasoningWenjun Hou, Yi Cheng, Kaishuai Xu et al.
Automating radiology report generation can significantly alleviate radiologists' workloads. Previous research has primarily focused on realizing highly concise observations while neglecting the precise attributes that determine the severity of diseases (e.g., small pleural effusion). Since incorrect attributes will lead to imprecise radiology reports, strengthening the generation process with precise attribute modeling becomes necessary. Additionally, the temporal information contained in the historical records, which is crucial in evaluating a patient's current condition (e.g., heart size is unchanged), has also been largely disregarded. To address these issues, we propose RECAP, which generates precise and accurate radiology reports via dynamic disease progression reasoning. Specifically, RECAP first predicts the observations and progressions (i.e., spatiotemporal information) given two consecutive radiographs. It then combines the historical records, spatiotemporal information, and radiographs for report generation, where a disease progression graph and dynamic progression reasoning mechanism are devised to accurately select the attributes of each observation and progression. Extensive experiments on two publicly available datasets demonstrate the effectiveness of our model.
Promoting Open-domain Dialogue Generation through Learning Pattern Information between Contexts and ResponsesMengjuan Liu, Chenyang Liu, Yunfan Yang et al.
Recently, utilizing deep neural networks to build the opendomain dialogue models has become a hot topic. However, the responses generated by these models suffer from many problems such as responses not being contextualized and tend to generate generic responses that lack information content, damaging the user's experience seriously. Therefore, many studies try introducing more information into the dialogue models to make the generated responses more vivid and informative. Unlike them, this paper improves the quality of generated responses by learning the implicit pattern information between contexts and responses in the training samples. In this paper, we first build an open-domain dialogue model based on the pre-trained language model (i.e., GPT-2). And then, an improved scheduled sampling method is proposed for pre-trained models, by which the responses can be used to guide the response generation in the training phase while avoiding the exposure bias problem. More importantly, we design a response-aware mechanism for mining the implicit pattern information between contexts and responses so that the generated replies are more diverse and approximate to human replies. Finally, we evaluate the proposed model (RAD) on the Persona-Chat and DailyDialog datasets; and the experimental results show that our model outperforms the baselines on most automatic and manual metrics.
ICON: Improving Inter-Report Consistency in Radiology Report Generation via Lesion-aware Mixup AugmentationWenjun Hou, Yi Cheng, Kaishuai Xu et al.
Previous research on radiology report generation has made significant progress in terms of increasing the clinical accuracy of generated reports. In this paper, we emphasize another crucial quality that it should possess, i.e., inter-report consistency, which refers to the capability of generating consistent reports for semantically equivalent radiographs. This quality is even of greater significance than the overall report accuracy in terms of ensuring the system's credibility, as a system prone to providing conflicting results would severely erode users' trust. Regrettably, existing approaches struggle to maintain inter-report consistency, exhibiting biases towards common patterns and susceptibility to lesion variants. To address this issue, we propose ICON, which improves the inter-report consistency of radiology report generation. Aiming to enhance the system's ability to capture similarities in semantically equivalent lesions, our approach first involves extracting lesions from input images and examining their characteristics. Then, we introduce a lesion-aware mixup technique to ensure that the representations of the semantically equivalent lesions align with the same attributes, achieved through a linear combination during the training phase. Extensive experiments on three publicly available chest X-ray datasets verify the effectiveness of our approach, both in terms of improving the consistency and accuracy of the generated reports.
RADAR: Enhancing Radiology Report Generation with Supplementary Knowledge InjectionWenjun Hou, Yi Cheng, Kaishuai Xu et al.
Large language models (LLMs) have demonstrated remarkable capabilities in various domains, including radiology report generation. Previous approaches have attempted to utilize multimodal LLMs for this task, enhancing their performance through the integration of domain-specific knowledge retrieval. However, these approaches often overlook the knowledge already embedded within the LLMs, leading to redundant information integration. To address this limitation, we propose Radar, a framework for enhancing radiology report generation with supplementary knowledge injection. Radar improves report generation by systematically leveraging both the internal knowledge of an LLM and externally retrieved information. Specifically, it first extracts the model's acquired knowledge that aligns with expert image-based classification outputs. It then retrieves relevant supplementary knowledge to further enrich this information. Finally, by aggregating both sources, Radar generates more accurate and informative radiology reports. Extensive experiments on MIMIC-CXR, CheXpert-Plus, and IU X-ray demonstrate that our model outperforms state-of-the-art LLMs in both language quality and clinical accuracy.
8.7CVNov 17, 2024
Memory-Augmented Multimodal LLMs for Surgical VQA via Self-Contained InquiryWenjun Hou, Yi Cheng, Kaishuai Xu et al.
Comprehensively understanding surgical scenes in Surgical Visual Question Answering (Surgical VQA) requires reasoning over multiple objects. Previous approaches address this task using cross-modal fusion strategies to enhance reasoning ability. However, these methods often struggle with limited scene understanding and question comprehension, and some rely on external resources (e.g., pre-extracted object features), which can introduce errors and generalize poorly across diverse surgical environments. To address these challenges, we propose SCAN, a simple yet effective memory-augmented framework that leverages Multimodal LLMs to improve surgical context comprehension via Self-Contained Inquiry. SCAN operates autonomously, generating two types of memory for context augmentation: Direct Memory (DM), which provides multiple candidates (or hints) to the final answer, and Indirect Memory (IM), which consists of self-contained question-hint pairs to capture broader scene context. DM directly assists in answering the question, while IM enhances understanding of the surgical scene beyond the immediate query. Reasoning over these object-aware memories enables the model to accurately interpret images and respond to questions. Extensive experiments on three publicly available Surgical VQA datasets demonstrate that SCAN achieves state-of-the-art performance, offering improved accuracy and robustness across various surgical scenarios.
M$^{3}$D: A Multimodal, Multilingual and Multitask Dataset for Grounded Document-level Information ExtractionJiang Liu, Bobo Li, Xinran Yang et al.
Multimodal information extraction (IE) tasks have attracted increasing attention because many studies have shown that multimodal information benefits text information extraction. However, existing multimodal IE datasets mainly focus on sentence-level image-facilitated IE in English text, and pay little attention to video-based multimodal IE and fine-grained visual grounding. Therefore, in order to promote the development of multimodal IE, we constructed a multimodal multilingual multitask dataset, named M$^{3}$D, which has the following features: (1) It contains paired document-level text and video to enrich multimodal information; (2) It supports two widely-used languages, namely English and Chinese; (3) It includes more multimodal IE tasks such as entity recognition, entity chain extraction, relation extraction and visual grounding. In addition, our dataset introduces an unexplored theme, i.e., biography, enriching the domains of multimodal IE resources. To establish a benchmark for our dataset, we propose an innovative hierarchical multimodal IE model. This model effectively leverages and integrates multimodal information through a Denoised Feature Fusion Module (DFFM). Furthermore, in non-ideal scenarios, modal information is often incomplete. Thus, we designed a Missing Modality Construction Module (MMCM) to alleviate the issues caused by missing modalities. Our model achieved an average performance of 53.80% and 53.77% on four tasks in English and Chinese datasets, respectively, which set a reasonable standard for subsequent research. In addition, we conducted more analytical experiments to verify the effectiveness of our proposed module. We believe that our work can promote the development of the field of multimodal IE.
Unified Named Entity Recognition as Word-Word Relation ClassificationJingye Li, Hao Fei, Jiang Liu et al.
So far, named entity recognition (NER) has been involved with three major types, including flat, overlapped (aka. nested), and discontinuous NER, which have mostly been studied individually. Recently, a growing interest has been built for unified NER, tackling the above three jobs concurrently with one single model. Current best-performing methods mainly include span-based and sequence-to-sequence models, where unfortunately the former merely focus on boundary identification and the latter may suffer from exposure bias. In this work, we present a novel alternative by modeling the unified NER as word-word relation classification, namely W^2NER. The architecture resolves the kernel bottleneck of unified NER by effectively modeling the neighboring relations between entity words with Next-Neighboring-Word (NNW) and Tail-Head-Word-* (THW-*) relations. Based on the W^2NER scheme we develop a neural framework, in which the unified NER is modeled as a 2D grid of word pairs. We then propose multi-granularity 2D convolutions for better refining the grid representations. Finally, a co-predictor is used to sufficiently reason the word-word relations. We perform extensive experiments on 14 widely-used benchmark datasets for flat, overlapped, and discontinuous NER (8 English and 6 Chinese datasets), where our model beats all the current top-performing baselines, pushing the state-of-the-art performances of unified NER.