Yu Su

CL
h-index42
41papers
16,742citations
Novelty48%
AI Score54

41 Papers

49.4CLNov 27, 2023Code
MMMU: A Massive Multi-discipline Multimodal Understanding and Reasoning Benchmark for Expert AGI

Xiang Yue, Yuansheng Ni, Kai Zhang et al. · microsoft-research, princeton

We introduce MMMU: a new benchmark designed to evaluate multimodal models on massive multi-discipline tasks demanding college-level subject knowledge and deliberate reasoning. MMMU includes 11.5K meticulously collected multimodal questions from college exams, quizzes, and textbooks, covering six core disciplines: Art & Design, Business, Science, Health & Medicine, Humanities & Social Science, and Tech & Engineering. These questions span 30 subjects and 183 subfields, comprising 30 highly heterogeneous image types, such as charts, diagrams, maps, tables, music sheets, and chemical structures. Unlike existing benchmarks, MMMU focuses on advanced perception and reasoning with domain-specific knowledge, challenging models to perform tasks akin to those faced by experts. The evaluation of 14 open-source LMMs as well as the proprietary GPT-4V(ision) and Gemini highlights the substantial challenges posed by MMMU. Even the advanced GPT-4V and Gemini Ultra only achieve accuracies of 56% and 59% respectively, indicating significant room for improvement. We believe MMMU will stimulate the community to build next-generation multimodal foundation models towards expert artificial general intelligence.

48.7CVJun 16, 2023Code
MagicBrush: A Manually Annotated Dataset for Instruction-Guided Image Editing

Kai Zhang, Lingbo Mo, Wenhu Chen et al. · microsoft-research

Text-guided image editing is widely needed in daily life, ranging from personal use to professional applications such as Photoshop. However, existing methods are either zero-shot or trained on an automatically synthesized dataset, which contains a high volume of noise. Thus, they still require lots of manual tuning to produce desirable outcomes in practice. To address this issue, we introduce MagicBrush (https://osu-nlp-group.github.io/MagicBrush/), the first large-scale, manually annotated dataset for instruction-guided real image editing that covers diverse scenarios: single-turn, multi-turn, mask-provided, and mask-free editing. MagicBrush comprises over 10K manually annotated triplets (source image, instruction, target image), which supports trainining large-scale text-guided image editing models. We fine-tune InstructPix2Pix on MagicBrush and show that the new model can produce much better images according to human evaluation. We further conduct extensive experiments to evaluate current image editing baselines from multiple dimensions including quantitative, qualitative, and human evaluations. The results reveal the challenging nature of our dataset and the gap between current baselines and real-world editing needs.

40.4CLSep 4, 2024
MMMU-Pro: A More Robust Multi-discipline Multimodal Understanding Benchmark

Xiang Yue, Tianyu Zheng, Yuansheng Ni et al. · microsoft-research

This paper introduces MMMU-Pro, a robust version of the Massive Multi-discipline Multimodal Understanding and Reasoning (MMMU) benchmark. MMMU-Pro rigorously assesses multimodal models' true understanding and reasoning capabilities through a three-step process based on MMMU: (1) filtering out questions answerable by text-only models, (2) augmenting candidate options, and (3) introducing a vision-only input setting where questions are embedded within images. This setting challenges AI to truly "see" and "read" simultaneously, testing a fundamental human cognitive skill of seamlessly integrating visual and textual information. Results show that model performance is substantially lower on MMMU-Pro than on MMMU, ranging from 16.8% to 26.9% across models. We explore the impact of OCR prompts and Chain of Thought (CoT) reasoning, finding that OCR prompts have minimal effect while CoT generally improves performance. MMMU-Pro provides a more rigorous evaluation tool, closely mimicking real-world scenarios and offering valuable directions for future research in multimodal AI.

26.5CLJun 30, 2023Code
Biomedical Language Models are Robust to Sub-optimal Tokenization

Bernal Jiménez Gutiérrez, Huan Sun, Yu Su · microsoft-research

As opposed to general English, many concepts in biomedical terminology have been designed in recent history by biomedical professionals with the goal of being precise and concise. This is often achieved by concatenating meaningful biomedical morphemes to create new semantic units. Nevertheless, most modern biomedical language models (LMs) are pre-trained using standard domain-specific tokenizers derived from large scale biomedical corpus statistics without explicitly leveraging the agglutinating nature of biomedical language. In this work, we first find that standard open-domain and biomedical tokenizers are largely unable to segment biomedical terms into meaningful components. Therefore, we hypothesize that using a tokenizer which segments biomedical terminology more accurately would enable biomedical LMs to improve their performance on downstream biomedical NLP tasks, especially ones which involve biomedical terms directly such as named entity recognition (NER) and entity linking. Surprisingly, we find that pre-training a biomedical LM using a more accurate biomedical tokenizer does not improve the entity representation quality of a language model as measured by several intrinsic and extrinsic measures such as masked language modeling prediction (MLM) accuracy as well as NER and entity linking performance. These quantitative findings, along with a case study which explores entity representation quality more directly, suggest that the biomedical pre-training process is quite robust to instances of sub-optimal tokenization.

22.9SEAug 21, 2024Code
RePair: Automated Program Repair with Process-based Feedback

Yuze Zhao, Zhenya Huang, Yixiao Ma et al.

The gap between the trepidation of program reliability and the expense of repairs underscores the indispensability of Automated Program Repair (APR). APR is instrumental in transforming vulnerable programs into more robust ones, bolstering program reliability while simultaneously diminishing the financial burden of manual repairs. Commercial-scale language models (LM) have taken APR to unprecedented levels. However, the emergence reveals that for models fewer than 100B parameters, making single-step modifications may be difficult to achieve the desired effect. Moreover, humans interact with the LM through explicit prompts, which hinders the LM from receiving feedback from compiler and test cases to automatically optimize its repair policies. In this literature, we explore how small-scale LM (less than 20B) achieve excellent performance through process supervision and feedback. We start by constructing a dataset named CodeNet4Repair, replete with multiple repair records, which supervises the fine-tuning of a foundational model. Building upon the encouraging outcomes of reinforcement learning, we develop a reward model that serves as a critic, providing feedback for the fine-tuned LM's action, progressively optimizing its policy. During inference, we require the LM to generate solutions iteratively until the repair effect no longer improves or hits the maximum step limit. The results show that process-based not only outperforms larger outcome-based generation methods, but also nearly matches the performance of closed-source commercial large-scale LMs.

51.1IRJan 3, 2024Code
GPT-4V(ision) is a Generalist Web Agent, if Grounded

Boyuan Zheng, Boyu Gou, Jihyung Kil et al. · microsoft-research

The recent development on large multimodal models (LMMs), especially GPT-4V(ision) and Gemini, has been quickly expanding the capability boundaries of multimodal models beyond traditional tasks like image captioning and visual question answering. In this work, we explore the potential of LMMs like GPT-4V as a generalist web agent that can follow natural language instructions to complete tasks on any given website. We propose SEEACT, a generalist web agent that harnesses the power of LMMs for integrated visual understanding and acting on the web. We evaluate on the recent MIND2WEB benchmark. In addition to standard offline evaluation on cached websites, we enable a new online evaluation setting by developing a tool that allows running web agents on live websites. We show that GPT-4V presents a great potential for web agents -- it can successfully complete 51.1 of the tasks on live websites if we manually ground its textual plans into actions on the websites. This substantially outperforms text-only LLMs like GPT-4 or smaller models (FLAN-T5 and BLIP-2) specifically fine-tuned for web agents. However, grounding still remains a major challenge. Existing LMM grounding strategies like set-of-mark prompting turns out to be not effective for web agents, and the best grounding strategy we develop in this paper leverages both the HTML structure and visuals. Yet, there is still a substantial gap with oracle grounding, leaving ample room for further improvement. All code, data, and evaluation tools are available at https://github.com/OSU-NLP-Group/SeeAct.

34.1AIFeb 17, 2025Code
Explorer: Scaling Exploration-driven Web Trajectory Synthesis for Multimodal Web Agents

Vardaan Pahuja, Yadong Lu, Corby Rosset et al. · microsoft-research

Recent success in large multimodal models (LMMs) has sparked promising applications of agents capable of autonomously completing complex web tasks. While open-source LMM agents have made significant advances in offline evaluation benchmarks, their performance still falls substantially short of human-level capabilities in more realistic online settings. A key bottleneck is the lack of diverse and large-scale trajectory-level datasets across various domains, which are expensive to collect. In this paper, we address this challenge by developing a scalable recipe to synthesize the largest and most diverse trajectory-level dataset to date, containing over 94K successful multimodal web trajectories, spanning 49K unique URLs, 720K screenshots, and 33M web elements. In particular, we leverage extensive web exploration and refinement to obtain diverse task intents. The average cost is 28 cents per successful trajectory, making it affordable to a wide range of users in the community. Leveraging this dataset, we train Explorer, a multimodal web agent, and demonstrate strong performance on both offline and online web agent benchmarks such as Mind2Web-Live, Multimodal-Mind2Web, and MiniWob++. Additionally, our experiments highlight data scaling as a key driver for improving web agent capabilities. We hope this study makes state-of-the-art LMM-based agent research at a larger scale more accessible.

18.1CLMar 7, 2024Code
LLMs in the Imaginarium: Tool Learning through Simulated Trial and Error

Boshi Wang, Hao Fang, Jason Eisner et al. · microsoft-research

Tools are essential for large language models (LLMs) to acquire up-to-date information and take consequential actions in external environments. Existing work on tool-augmented LLMs primarily focuses on the broad coverage of tools and the flexibility of adding new tools. However, a critical aspect that has surprisingly been understudied is simply how accurately an LLM uses tools for which it has been trained. We find that existing LLMs, including GPT-4 and open-source LLMs specifically fine-tuned for tool use, only reach a correctness rate in the range of 30% to 60%, far from reliable use in practice. We propose a biologically inspired method for tool-augmented LLMs, simulated trial and error (STE), that orchestrates three key mechanisms for successful tool use behaviors in the biological system: trial and error, imagination, and memory. Specifically, STE leverages an LLM's 'imagination' to simulate plausible scenarios for using a tool, after which the LLM interacts with the tool to learn from its execution feedback. Both short-term and long-term memory are employed to improve the depth and breadth of the exploration, respectively. Comprehensive experiments on ToolBench show that STE substantially improves tool learning for LLMs under both in-context learning and fine-tuning settings, bringing a boost of 46.7% to Mistral-Instruct-7B and enabling it to outperform GPT-4. We also show effective continual learning of tools via a simple experience replay strategy.

37.9CLFeb 2, 2024Code
TravelPlanner: A Benchmark for Real-World Planning with Language Agents

Jian Xie, Kai Zhang, Jiangjie Chen et al. · microsoft-research

Planning has been part of the core pursuit for artificial intelligence since its conception, but earlier AI agents mostly focused on constrained settings because many of the cognitive substrates necessary for human-level planning have been lacking. Recently, language agents powered by large language models (LLMs) have shown interesting capabilities such as tool use and reasoning. Are these language agents capable of planning in more complex settings that are out of the reach of prior AI agents? To advance this investigation, we propose TravelPlanner, a new planning benchmark that focuses on travel planning, a common real-world planning scenario. It provides a rich sandbox environment, various tools for accessing nearly four million data records, and 1,225 meticulously curated planning intents and reference plans. Comprehensive evaluations show that the current language agents are not yet capable of handling such complex planning tasks-even GPT-4 only achieves a success rate of 0.6%. Language agents struggle to stay on task, use the right tools to collect information, or keep track of multiple constraints. However, we note that the mere possibility for language agents to tackle such a complex problem is in itself non-trivial progress. TravelPlanner provides a challenging yet meaningful testbed for future language agents.

21.8CLMay 23, 2023Code
Error Detection for Text-to-SQL Semantic Parsing

Shijie Chen, Ziru Chen, Huan Sun et al.

Despite remarkable progress in text-to-SQL semantic parsing in recent years, the performance of existing parsers is still far from perfect. Specifically, modern text-to-SQL parsers based on deep learning are often over-confident, thus casting doubt on their trustworthiness when deployed for real use. In this paper, we propose a parser-independent error detection model for text-to-SQL semantic parsing. Using a language model of code as its bedrock, we enhance our error detection model with graph neural networks that learn structural features of both natural language questions and SQL queries. We train our model on realistic parsing errors collected from a cross-domain setting, which leads to stronger generalization ability. Experiments with three strong text-to-SQL parsers featuring different decoding mechanisms show that our approach outperforms parser-dependent uncertainty metrics. Our model could also effectively improve the performance and usability of text-to-SQL semantic parsers regardless of their architectures. (Our implementation is available at https://github.com/OSU-NLP-Group/Text2SQL-Error-Detection)

27.0CLMay 22, 2023Code
Text-to-SQL Error Correction with Language Models of Code

Ziru Chen, Shijie Chen, Michael White et al.

Despite recent progress in text-to-SQL parsing, current semantic parsers are still not accurate enough for practical use. In this paper, we investigate how to build automatic text-to-SQL error correction models. Noticing that token-level edits are out of context and sometimes ambiguous, we propose building clause-level edit models instead. Besides, while most language models of code are not specifically pre-trained for SQL, they know common data structures and their operations in programming languages such as Python. Thus, we propose a novel representation for SQL queries and their edits that adheres more closely to the pre-training corpora of language models of code. Our error correction model improves the exact set match accuracy of different parsers by 2.4-6.5 and obtains up to 4.3 point absolute improvement over two strong baselines. Our code and data are available at https://github.com/OSU-NLP-Group/Auto-SQL-Correction.

0.9CLMay 15, 2023Code
Memorization for Good: Encryption with Autoregressive Language Models

Samuel Stevens, Yu Su

Over-parameterized neural language models (LMs) can memorize and recite long sequences of training data. While such memorization is normally associated with undesired properties such as overfitting and information leaking, our work casts memorization as an unexplored capability of LMs. We propose the first symmetric encryption algorithm with autoregressive language models (SELM). We show that autoregressive LMs can encode arbitrary data into a compact real-valued vector (i.e., encryption) and then losslessly decode the vector to the original message (i.e., decryption) via random subspace optimization and greedy decoding. While SELM is not amenable to conventional cryptanalysis, we investigate its security through a novel empirical variant of the classic IND-CPA (indistinguishability under chosen-plaintext attack) game and show promising results on security. Our code and datasets are available at https://github.com/OSU-NLP-Group/SELM.

6.6LGMay 7, 2023Code
PiML Toolbox for Interpretable Machine Learning Model Development and Diagnostics

Agus Sudjianto, Aijun Zhang, Zebin Yang et al.

PiML (read $π$-ML, /`pai`em`el/) is an integrated and open-access Python toolbox for interpretable machine learning model development and model diagnostics. It is designed with machine learning workflows in both low-code and high-code modes, including data pipeline, model training and tuning, model interpretation and explanation, and model diagnostics and comparison. The toolbox supports a growing list of interpretable models (e.g. GAM, GAMI-Net, XGB1/XGB2) with inherent local and/or global interpretability. It also supports model-agnostic explainability tools (e.g. PFI, PDP, LIME, SHAP) and a powerful suite of model-agnostic diagnostics (e.g. weakness, reliability, robustness, resilience, fairness). Integration of PiML models and tests to existing MLOps platforms for quality assurance are enabled by flexible high-code APIs. Furthermore, PiML toolbox comes with a comprehensive user guide and hands-on examples, including the applications for model development and validation in banking. The project is available at https://github.com/SelfExplainML/PiML-Toolbox.

26.9CLNov 28, 2020Code
An Investigation of Language Model Interpretability via Sentence Editing

Samuel Stevens, Yu Su

Pre-trained language models (PLMs) like BERT are being used for almost all language-related tasks, but interpreting their behavior still remains a significant challenge and many important questions remain largely unanswered. In this work, we re-purpose a sentence editing dataset, where faithful high-quality human rationales can be automatically extracted and compared with extracted model rationales, as a new testbed for interpretability. This enables us to conduct a systematic investigation on an array of questions regarding PLMs' interpretability, including the role of pre-training procedure, comparison of rationale extraction methods, and different layers in the PLM. The investigation generates new insights, for example, contrary to the common understanding, we find that attention weights correlate well with human rationales and work better than gradient-based saliency in extracting model rationales. Both the dataset and code are available at https://github.com/samuelstevens/sentence-editing-interpretability to facilitate future interpretability research.

31.5CLOct 5, 2020Code
KGPT: Knowledge-Grounded Pre-Training for Data-to-Text Generation

Wenhu Chen, Yu Su, Xifeng Yan et al.

Data-to-text generation has recently attracted substantial interests due to its wide applications. Existing methods have shown impressive performance on an array of tasks. However, they rely on a significant amount of labeled data for each task, which is costly to acquire and thus limits their application to new tasks and domains. In this paper, we propose to leverage pre-training and transfer learning to address this issue. We propose a knowledge-grounded pre-training (KGPT), which consists of two parts, 1) a general knowledge-grounded generation model to generate knowledge-enriched text. 2) a pre-training paradigm on a massive knowledge-grounded text corpus crawled from the web. The pre-trained model can be fine-tuned on various data-to-text generation tasks to generate task-specific text. We adopt three settings, namely fully-supervised, zero-shot, few-shot to evaluate its effectiveness. Under the fully-supervised setting, our model can achieve remarkable gains over the known baselines. Under zero-shot setting, our model without seeing any examples achieves over 30 ROUGE-L on WebNLG while all other baselines fail. Under the few-shot setting, our model only needs about one-fifteenth as many labeled examples to achieve the same level of performance as baseline models. These experiments consistently prove the strong generalization ability of our proposed framework https://github.com/wenhuchen/KGPT.

31.3CLMay 2, 2020Code
An Imitation Game for Learning Semantic Parsers from User Interaction

Ziyu Yao, Yiqi Tang, Wen-tau Yih et al.

Despite the widely successful applications, bootstrapping and fine-tuning semantic parsers are still a tedious process with challenges such as costly data annotation and privacy risks. In this paper, we suggest an alternative, human-in-the-loop methodology for learning semantic parsers directly from users. A semantic parser should be introspective of its uncertainties and prompt for user demonstration when uncertain. In doing so it also gets to imitate the user behavior and continue improving itself autonomously with the hope that eventually it may become as good as the user in interpreting their questions. To combat the sparsity of demonstration, we propose a novel annotation-efficient imitation learning algorithm, which iteratively collects new datasets by mixing demonstrated states and confident predictions and re-trains the semantic parser in a Dataset Aggregation fashion (Ross et al., 2011). We provide a theoretical analysis of its cost bound and also empirically demonstrate its promising performance on the text-to-SQL problem. Code will be available at https://github.com/sunlab-osu/MISP.

31.9CLApr 22, 2020Code
Logical Natural Language Generation from Open-Domain Tables

Wenhu Chen, Jianshu Chen, Yu Su et al.

Neural natural language generation (NLG) models have recently shown remarkable progress in fluency and coherence. However, existing studies on neural NLG are primarily focused on surface-level realizations with limited emphasis on logical inference, an important aspect of human thinking and language. In this paper, we suggest a new NLG task where a model is tasked with generating natural language statements that can be \emph{logically entailed} by the facts in an open-domain semi-structured table. To facilitate the study of the proposed logical NLG problem, we use the existing TabFact dataset \cite{chen2019tabfact} featured with a wide range of logical/symbolic inferences as our testbed, and propose new automatic metrics to evaluate the fidelity of generation models w.r.t.\ logical inference. The new task poses challenges to the existing monotonic generation frameworks due to the mismatch between sequence order and logical order. In our experiments, we comprehensively survey different generation architectures (LSTM, Transformer, Pre-Trained LM) trained with different algorithms (RL, Adversarial Training, Coarse-to-Fine) on the dataset and made following observations: 1) Pre-Trained LM can significantly boost both the fluency and logical fidelity metrics, 2) RL and Adversarial Training are trading fluency for fidelity, 3) Coarse-to-Fine generation can help partially alleviate the fidelity issue while maintaining high language fluency. The code and data are available at \url{https://github.com/wenhuchen/LogicNLG}.

31.0CLJun 3, 2019Code
Global Textual Relation Embedding for Relational Understanding

Zhiyu Chen, Hanwen Zha, Honglei Liu et al.

Pre-trained embeddings such as word embeddings and sentence embeddings are fundamental tools facilitating a wide range of downstream NLP tasks. In this work, we investigate how to learn a general-purpose embedding of textual relations, defined as the shortest dependency path between entities. Textual relation embedding provides a level of knowledge between word/phrase level and sentence level, and we show that it can facilitate downstream tasks requiring relational understanding of the text. To learn such an embedding, we create the largest distant supervision dataset by linking the entire English ClueWeb09 corpus to Freebase. We use global co-occurrence statistics between textual and knowledge base relations as the supervision signal to train the embedding. Evaluation on two relational understanding tasks demonstrates the usefulness of the learned textual relation embedding. The data and code can be found at https://github.com/czyssrs/GloREPlus

34.2CVMar 28, 2024Code
MagicLens: Self-Supervised Image Retrieval with Open-Ended Instructions

Kai Zhang, Yi Luan, Hexiang Hu et al. · microsoft-research

Image retrieval, i.e., finding desired images given a reference image, inherently encompasses rich, multi-faceted search intents that are difficult to capture solely using image-based measures. Recent works leverage text instructions to allow users to more freely express their search intents. However, they primarily focus on image pairs that are visually similar and/or can be characterized by a small set of pre-defined relations. The core thesis of this paper is that text instructions can enable retrieving images with richer relations beyond visual similarity. To show this, we introduce MagicLens, a series of self-supervised image retrieval models that support open-ended instructions. MagicLens is built on a key novel insight: image pairs that naturally occur on the same web pages contain a wide range of implicit relations (e.g., inside view of), and we can bring those implicit relations explicit by synthesizing instructions via foundation models. Trained on 36.7M (query image, instruction, target image) triplets with rich semantic relations mined from the web, MagicLens achieves results comparable with or better than prior best on eight benchmarks of various image retrieval tasks, while maintaining high parameter efficiency with a significantly smaller model size. Additional human analyses on a 1.4M-image unseen corpus further demonstrate the diversity of search intents supported by MagicLens. Code and models are publicly available at https://open-vision-language.github.io/MagicLens/.

10.1CLDec 5, 2023
MUFFIN: Curating Multi-Faceted Instructions for Improving Instruction-Following

Renze Lou, Kai Zhang, Jian Xie et al.

In the realm of large language models (LLMs), enhancing instruction-following capability often involves curating expansive training data. This is achieved through two primary schemes: i) Scaling-Inputs: Amplifying (input, output) pairs per task instruction, aiming for better instruction adherence. ii) Scaling Input-Free Tasks: Enlarging tasks, each composed of an (instruction, output) pair (without requiring a separate input anymore). However, LLMs under Scaling-Inputs tend to be overly sensitive to inputs, leading to misinterpretation or non-compliance with instructions. Conversely, Scaling Input-Free Tasks demands a substantial number of tasks but is less effective in instruction following when dealing with instances in Scaling-Inputs. This work introduces MUFFIN, a new scheme of instruction-following dataset curation. Specifically, we automatically Scale Tasks per Input by diversifying these tasks with various input facets. Experimental results across four zero-shot benchmarks, spanning both Scaling-Inputs and Scaling Input-Free Tasks schemes, reveal that LLMs, at various scales, trained on MUFFIN generally demonstrate superior instruction-following capabilities compared to those trained on the two aforementioned schemes.

20.9CVFeb 6, 2024
Dual-View Visual Contextualization for Web Navigation

Jihyung Kil, Chan Hee Song, Boyuan Zheng et al. · microsoft-research

Automatic web navigation aims to build a web agent that can follow language instructions to execute complex and diverse tasks on real-world websites. Existing work primarily takes HTML documents as input, which define the contents and action spaces (i.e., actionable elements and operations) of webpages. Nevertheless, HTML documents may not provide a clear task-related context for each element, making it hard to select the right (sequence of) actions. In this paper, we propose to contextualize HTML elements through their "dual views" in webpage screenshots: each HTML element has its corresponding bounding box and visual content in the screenshot. We build upon the insight -- web developers tend to arrange task-related elements nearby on webpages to enhance user experiences -- and propose to contextualize each element with its neighbor elements, using both textual and visual features. The resulting representations of HTML elements are more informative for the agent to take action. We validate our method on the recently released Mind2Web dataset, which features diverse navigation domains and tasks on real-world websites. Our method consistently outperforms the baseline in all the scenarios, including cross-task, cross-website, and cross-domain ones.

29.2CVMay 29, 2025Code
BioCLIP 2: Emergent Properties from Scaling Hierarchical Contrastive Learning

Jianyang Gu, Samuel Stevens, Elizabeth G Campolongo et al. · microsoft-research

Foundation models trained at scale exhibit remarkable emergent behaviors, learning new capabilities beyond their initial training objectives. We find such emergent behaviors in biological vision models via large-scale contrastive vision-language training. To achieve this, we first curate TreeOfLife-200M, comprising 214 million images of living organisms, the largest and most diverse biological organism image dataset to date. We then train BioCLIP 2 on TreeOfLife-200M to distinguish different species. Despite the narrow training objective, BioCLIP 2 yields extraordinary accuracy when applied to various biological visual tasks such as habitat classification and trait prediction. We identify emergent properties in the learned embedding space of BioCLIP 2. At the inter-species level, the embedding distribution of different species aligns closely with functional and ecological meanings (e.g., beak sizes and habitats). At the intra-species level, instead of being diminished, the intra-species variations (e.g., life stages and sexes) are preserved and better separated in subspaces orthogonal to inter-species distinctions. We provide formal proof and analyses to explain why hierarchical supervision and contrastive objectives encourage these emergent properties. Crucially, our results reveal that these properties become increasingly significant with larger-scale training data, leading to a biologically meaningful embedding space.

24.3AIOct 13, 2025
Holistic Agent Leaderboard: The Missing Infrastructure for AI Agent Evaluation

Sayash Kapoor, Benedikt Stroebl, Peter Kirgis et al. · microsoft-research, princeton

AI agents have been developed for complex real-world tasks from coding to customer service. But AI agent evaluations suffer from many challenges that undermine our understanding of how well agents really work. We introduce the Holistic Agent Leaderboard (HAL) to address these challenges. We make three main contributions. First, we provide a standardized evaluation harness that orchestrates parallel evaluations across hundreds of VMs, reducing evaluation time from weeks to hours while eliminating common implementation bugs. Second, we conduct three-dimensional analysis spanning models, scaffolds, and benchmarks. We validate the harness by conducting 21,730 agent rollouts across 9 models and 9 benchmarks in coding, web navigation, science, and customer service with a total cost of about $40,000. Our analysis reveals surprising insights, such as higher reasoning effort reducing accuracy in the majority of runs. Third, we use LLM-aided log inspection to uncover previously unreported behaviors, such as searching for the benchmark on HuggingFace instead of solving a task, or misusing credit cards in flight booking tasks. We share all agent logs, comprising 2.5B tokens of language model calls, to incentivize further research into agent behavior. By standardizing how the field evaluates agents and addressing common pitfalls in agent evaluation, we hope to shift the focus from agents that ace benchmarks to agents that work reliably in the real world.

20.2AIJul 18, 2025
WebGuard: Building a Generalizable Guardrail for Web Agents

Boyuan Zheng, Zeyi Liao, Scott Salisbury et al. · microsoft-research

The rapid development of autonomous web agents powered by Large Language Models (LLMs), while greatly elevating efficiency, exposes the frontier risk of taking unintended or harmful actions. This situation underscores an urgent need for effective safety measures, akin to access controls for human users. To address this critical challenge, we introduce WebGuard, the first comprehensive dataset designed to support the assessment of web agent action risks and facilitate the development of guardrails for real-world online environments. In doing so, WebGuard specifically focuses on predicting the outcome of state-changing actions and contains 4,939 human-annotated actions from 193 websites across 22 diverse domains, including often-overlooked long-tail websites. These actions are categorized using a novel three-tier risk schema: SAFE, LOW, and HIGH. The dataset includes designated training and test splits to support evaluation under diverse generalization settings. Our initial evaluations reveal a concerning deficiency: even frontier LLMs achieve less than 60% accuracy in predicting action outcomes and less than 60% recall in lagging HIGH-risk actions, highlighting the risks of deploying current-generation agents without dedicated safeguards. We therefore investigate fine-tuning specialized guardrail models using WebGuard. We conduct comprehensive evaluations across multiple generalization settings and find that a fine-tuned Qwen2.5VL-7B model yields a substantial improvement in performance, boosting accuracy from 37% to 80% and HIGH-risk action recall from 20% to 76%. Despite these improvements, the performance still falls short of the reliability required for high-stakes deployment, where guardrails must approach near-perfect accuracy and recall.

28.4CLMay 18, 2023Code
Aligning Instruction Tasks Unlocks Large Language Models as Zero-Shot Relation Extractors

Kai Zhang, Bernal Jiménez Gutiérrez, Yu Su

Recent work has shown that fine-tuning large language models (LLMs) on large-scale instruction-following datasets substantially improves their performance on a wide range of NLP tasks, especially in the zero-shot setting. However, even advanced instruction-tuned LLMs still fail to outperform small LMs on relation extraction (RE), a fundamental information extraction task. We hypothesize that instruction-tuning has been unable to elicit strong RE capabilities in LLMs due to RE's low incidence in instruction-tuning datasets, making up less than 1% of all tasks (Wang et al., 2022). To address this limitation, we propose QA4RE, a framework that aligns RE with question answering (QA), a predominant task in instruction-tuning datasets. Comprehensive zero-shot RE experiments over four datasets with two series of instruction-tuned LLMs (six LLMs in total) demonstrate that our QA4RE framework consistently improves LLM performance, strongly verifying our hypothesis and enabling LLMs to outperform strong zero-shot baselines by a large margin. Additionally, we provide thorough experiments and discussions to show the robustness, few-shot effectiveness, and strong transferability of our QA4RE framework. This work illustrates a promising way of adapting LLMs to challenging and underrepresented tasks by aligning these tasks with more common instruction-tuning tasks like QA.

25.9CLMay 10, 2023Code
Automatic Evaluation of Attribution by Large Language Models

Xiang Yue, Boshi Wang, Ziru Chen et al.

A recent focus of large language model (LLM) development, as exemplified by generative search engines, is to incorporate external references to generate and support its claims. However, evaluating the attribution, i.e., verifying whether the generated statement is fully supported by the cited reference, remains an open problem. Although human evaluation is common practice, it is costly and time-consuming. In this paper, we investigate the automatic evaluation of attribution given by LLMs. We begin by defining different types of attribution errors, and then explore two approaches for automatic evaluation: prompting LLMs and fine-tuning smaller LMs. The fine-tuning data is repurposed from related tasks such as question answering, fact-checking, natural language inference, and summarization. We manually curate a set of test examples covering 12 domains from a generative search engine, New Bing. Our results on this curated test set and simulated examples from existing benchmarks highlight both promising signals and challenges. We hope our problem formulation, testbeds, and findings will help lay the foundation for future studies on this important problem.

1.6CLDec 9, 2021
Compositional Generalization for Natural Language Interfaces to Web APIs

Saghar Hosseini, Ahmed Hassan Awadallah, Yu Su

This paper presents Okapi, a new dataset for Natural Language to executable web Application Programming Interfaces (NL2API). This dataset is in English and contains 22,508 questions and 9,019 unique API calls, covering three domains. We define new compositional generalization tasks for NL2API which explore the models' ability to extrapolate from simple API calls in the training set to new and more complex API calls in the inference phase. Also, the models are required to generate API calls that execute correctly as opposed to the existing approaches which evaluate queries with placeholder values. Our dataset is different than most of the existing compositional semantic parsing datasets because it is a non-synthetic dataset studying the compositional generalization in a low-resource setting. Okapi is a step towards creating realistic datasets and benchmarks for studying compositional generalization alongside the existing datasets and tasks. We report the generalization capabilities of sequence-to-sequence baseline models trained on a variety of the SCAN and Okapi datasets tasks. The best model achieves 15\% exact match accuracy when generalizing from simple API calls to more complex API calls. This highlights some challenges for future research. Okapi dataset and tasks are publicly available at https://aka.ms/nl2api/data.

30.9CLSep 10, 2021Code
ReasonBERT: Pre-trained to Reason with Distant Supervision

Xiang Deng, Yu Su, Alyssa Lees et al.

We present ReasonBert, a pre-training method that augments language models with the ability to reason over long-range relations and multiple, possibly hybrid contexts. Unlike existing pre-training methods that only harvest learning signals from local contexts of naturally occurring texts, we propose a generalized notion of distant supervision to automatically connect multiple pieces of text and tables to create pre-training examples that require long-range reasoning. Different types of reasoning are simulated, including intersecting multiple pieces of evidence, bridging from one piece of evidence to another, and detecting unanswerable cases. We conduct a comprehensive evaluation on a variety of extractive question answering datasets ranging from single-hop to multi-hop and from text-only to table-only to hybrid that require various reasoning capabilities and show that ReasonBert achieves remarkable improvement over an array of strong baselines. Few-shot experiments further demonstrate that our pre-training method substantially improves sample efficiency.

31.5CLJun 3, 2021Code
A Systematic Investigation of KB-Text Embedding Alignment at Scale

Vardaan Pahuja, Yu Gu, Wenhu Chen et al.

Knowledge bases (KBs) and text often contain complementary knowledge: KBs store structured knowledge that can support long range reasoning, while text stores more comprehensive and timely knowledge in an unstructured way. Separately embedding the individual knowledge sources into vector spaces has demonstrated tremendous successes in encoding the respective knowledge, but how to jointly embed and reason with both knowledge sources to fully leverage the complementary information is still largely an open problem. We conduct a large-scale, systematic investigation of aligning KB and text embeddings for joint reasoning. We set up a novel evaluation framework with two evaluation tasks, few-shot link prediction and analogical reasoning, and evaluate an array of KB-text embedding alignment methods. We also demonstrate how such alignment can infuse textual information into KB embeddings for more accurate link prediction on emerging entities and events, using COVID-19 as a case study.

15.3AIJan 15, 2021
Quality meets Diversity: A Model-Agnostic Framework for Computerized Adaptive Testing

Haoyang Bi, Haiping Ma, Zhenya Huang et al.

Computerized Adaptive Testing (CAT) is emerging as a promising testing application in many scenarios, such as education, game and recruitment, which targets at diagnosing the knowledge mastery levels of examinees on required concepts. It shows the advantage of tailoring a personalized testing procedure for each examinee, which selects questions step by step, depending on her performance. While there are many efforts on developing CAT systems, existing solutions generally follow an inflexible model-specific fashion. That is, they need to observe a specific cognitive model which can estimate examinee's knowledge levels and design the selection strategy according to the model estimation. In this paper, we study a novel model-agnostic CAT problem, where we aim to propose a flexible framework that can adapt to different cognitive models. Meanwhile, this work also figures out CAT solution with addressing the problem of how to generate both high-quality and diverse questions simultaneously, which can give a comprehensive knowledge diagnosis for each examinee. Inspired by Active Learning, we propose a novel framework, namely Model-Agnostic Adaptive Testing (MAAT) for CAT solution, where we design three sophisticated modules including Quality Module, Diversity Module and Importance Module. Extensive experimental results on two real-world datasets clearly demonstrate that our MAAT can support CAT with guaranteeing both quality and diversity perspectives.

3.3LGDec 15, 2020
Explainable Recommendation Systems by Generalized Additive Models with Manifest and Latent Interactions

Yifeng Guo, Yu Su, Zebin Yang et al.

In recent years, the field of recommendation systems has attracted increasing attention to developing predictive models that provide explanations of why an item is recommended to a user. The explanations can be either obtained by post-hoc diagnostics after fitting a relatively complex model or embedded into an intrinsically interpretable model. In this paper, we propose the explainable recommendation systems based on a generalized additive model with manifest and latent interactions (GAMMLI). This model architecture is intrinsically interpretable, as it additively consists of the user and item main effects, the manifest user-item interactions based on observed features, and the latent interaction effects from residuals. Unlike conventional collaborative filtering methods, the group effect of users and items are considered in GAMMLI. It is beneficial for enhancing the model interpretability, and can also facilitate the cold-start recommendation problem. A new Python package GAMMLI is developed for efficient model training and visualized interpretation of the results. By numerical experiments based on simulation data and real-world cases, the proposed method is shown to have advantages in both predictive performance and explainable recommendation.

56.3IRJun 15, 2020Code
Document Classification for COVID-19 Literature

Bernal Jiménez Gutiérrez, Juncheng Zeng, Dongdong Zhang et al.

The global pandemic has made it more important than ever to quickly and accurately retrieve relevant scientific literature for effective consumption by researchers in a wide range of fields. We provide an analysis of several multi-label document classification models on the LitCovid dataset, a growing collection of 23,000 research papers regarding the novel 2019 coronavirus. We find that pre-trained language models fine-tuned on this dataset outperform all other baselines and that BioBERT surpasses the others by a small margin with micro-F1 and accuracy scores of around 86% and 75% respectively on the test set. We evaluate the data efficiency and generalizability of these models as essential features of any system prepared to deal with an urgent situation like the current health crisis. Finally, we explore 50 errors made by the best performing models on LitCovid documents and find that they often (1) correlate certain labels too closely together and (2) fail to focus on discriminative sections of the articles; both of which are important issues to address in future work. Both data and code are available on GitHub.

0.9CVNov 27, 2019
Decision Propagation Networks for Image Classification

Keke Tang, Peng Song, Yuexin Ma et al.

High-level (e.g., semantic) features encoded in the latter layers of convolutional neural networks are extensively exploited for image classification, leaving low-level (e.g., color) features in the early layers underexplored. In this paper, we propose a novel Decision Propagation Module (DPM) to make an intermediate decision that could act as category-coherent guidance extracted from early layers, and then propagate it to the latter layers. Therefore, by stacking a collection of DPMs into a classification network, the generated Decision Propagation Network is explicitly formulated as to progressively encode more discriminative features guided by the decision, and then refine the decision based on the new generated features layer by layer. Comprehensive results on four publicly available datasets validate DPM could bring significant improvements for existing classification networks with minimal additional computational cost and is superior to the state-of-the-art methods.

30.4CLOct 11, 2019Code
Model-based Interactive Semantic Parsing: A Unified Framework and A Text-to-SQL Case Study

Ziyu Yao, Yu Su, Huan Sun et al.

As a promising paradigm, interactive semantic parsing has shown to improve both semantic parsing accuracy and user confidence in the results. In this paper, we propose a new, unified formulation of the interactive semantic parsing problem, where the goal is to design a model-based intelligent agent. The agent maintains its own state as the current predicted semantic parse, decides whether and where human intervention is needed, and generates a clarification question in natural language. A key part of the agent is a world model: it takes a percept (either an initial question or subsequent feedback from the user) and transitions to a new state. We then propose a simple yet remarkably effective instantiation of our framework, demonstrated on two text-to-SQL datasets (WikiSQL and Spider) with different state-of-the-art base semantic parsers. Compared to an existing interactive semantic parsing approach that treats the base parser as a black box, our approach solicits less user feedback but yields higher run-time accuracy.

2.0IVSep 9, 2019
Detection and Classification of Breast Cancer Metastates Based on U-Net

Lin Xu, Cheng Xu, Yi Tong et al.

This paper presents U-net based breast cancer metastases detection and classification in lymph nodes, as well as patient-level classification based on metastases detection. The whole pipeline can be divided into five steps: preprocessing and data argumentation, patch-based segmentation, post processing, slide-level classification, and patient-level classification. In order to reduce overfitting and speedup convergence, we applied batch normalization and dropout into U-Net. The final Kappa score reaches 0.902 on training data.

28.0CYJun 7, 2019
EKT: Exercise-aware Knowledge Tracing for Student Performance Prediction

Qi Liu, Zhenya Huang, Yu Yin et al.

For offering proactive services to students in intelligent education, one of the fundamental tasks is predicting their performance (e.g., scores) on future exercises, where it is necessary to track each student's knowledge acquisition during her exercising activities. However, existing approaches can only exploit the exercising records of students, and the problem of extracting rich information existed in the exercise's materials (e.g., knowledge concepts, exercise content) to achieve both precise predictions of student performance and interpretable analysis of knowledge acquisition remains underexplored. In this paper, we present a holistic study of student performance prediction. To directly achieve the primary goal of prediction, we first propose a general Exercise-Enhanced Recurrent Neural Network (EERNN) framework by exploring both student's records and the exercise contents. In EERNN, we simply summarize each student's state into an integrated vector and trace it with a recurrent neural network, where we design a bidirectional LSTM to learn the encoding of each exercise's content. For making predictions, we propose two implementations under EERNN with different strategies, i.e., EERNNM with Markov property and EERNNA with Attention mechanism. Then, to explicitly track student's knowledge acquisition on multiple knowledge concepts, we extend EERNN to an explainable Exercise-aware Knowledge Tracing (EKT) by incorporating the knowledge concept effects, where the student's integrated state vector is extended to a knowledge state matrix. In EKT, we further develop a memory network for quantifying how much each exercise can affect the mastery of students on concepts during the exercising process. Finally, we conduct extensive experiments on large-scale real-world data. The results demonstrate the prediction effectiveness of two frameworks as well as the superior interpretability of EKT.

31.2CLFeb 27, 2019Code
How Large a Vocabulary Does Text Classification Need? A Variational Approach to Vocabulary Selection

Wenhu Chen, Yu Su, Yilin Shen et al.

With the rapid development in deep learning, deep neural networks have been widely adopted in many real-life natural language applications. Under deep neural networks, a pre-defined vocabulary is required to vectorize text inputs. The canonical approach to select pre-defined vocabulary is based on the word frequency, where a threshold is selected to cut off the long tail distribution. However, we observed that such simple approach could easily lead to under-sized vocabulary or over-sized vocabulary issues. Therefore, we are interested in understanding how the end-task classification accuracy is related to the vocabulary size and what is the minimum required vocabulary size to achieve a specific performance. In this paper, we provide a more sophisticated variational vocabulary dropout (VVD) based on variational dropout to perform vocabulary selection, which can intelligently select the subset of the vocabulary to achieve the required performance. To evaluate different algorithms on the newly proposed vocabulary selection problem, we propose two new metrics: Area Under Accuracy-Vocab Curve and Vocab Size under X\% Accuracy Drop. Through extensive experiments on various NLP classification tasks, our variational framework is shown to significantly outperform the frequency-based and other selection baselines on these metrics.

32.1CLAug 19, 2018Code
XL-NBT: A Cross-lingual Neural Belief Tracking Framework

Wenhu Chen, Jianshu Chen, Yu Su et al.

Task-oriented dialog systems are becoming pervasive, and many companies heavily rely on them to complement human agents for customer service in call centers. With globalization, the need for providing cross-lingual customer support becomes more urgent than ever. However, cross-lingual support poses great challenges---it requires a large amount of additional annotated data from native speakers. In order to bypass the expensive human annotation and achieve the first step towards the ultimate goal of building a universal dialog system, we set out to build a cross-lingual state tracking framework. Specifically, we assume that there exists a source language with dialog belief tracking annotations while the target languages have no annotated dialog data of any form. Then, we pre-train a state tracker for the source language as a teacher, which is able to exploit easy-to-access parallel data. We then distill and transfer its own knowledge to the student state tracker in target languages. We specifically discuss two types of common parallel resources: bilingual corpus and bilingual dictionary, and design different transfer learning strategies accordingly. Experimentally, we successfully use English state tracker as the teacher to transfer its knowledge to both Italian and German trackers and achieve promising results.

1.7CVJan 1, 2018
Aggregated Channels Network for Real-Time Pedestrian Detection

Farzin Ghorban, Javier Marín, Yu Su et al.

Convolutional neural networks (CNNs) have demonstrated their superiority in numerous computer vision tasks, yet their computational cost results prohibitive for many real-time applications such as pedestrian detection which is usually performed on low-consumption hardware. In order to alleviate this drawback, most strategies focus on using a two-stage cascade approach. Essentially, in the first stage a fast method generates a significant but reduced amount of high quality proposals that later, in the second stage, are evaluated by the CNN. In this work, we propose a novel detection pipeline that further benefits from the two-stage cascade strategy. More concretely, the enriched and subsequently compressed features used in the first stage are reused as the CNN input. As a consequence, a simpler network architecture, adapted for such small input sizes, allows to achieve real-time performance and obtain results close to the state-of-the-art while running significantly faster without the use of GPU. In particular, considering that the proposed pipeline runs in frame rate, the achieved performance is highly competitive. We furthermore demonstrate that the proposed pipeline on itself can serve as an effective proposal generator.

10.6CLApr 20, 2017Code
Cross-domain Semantic Parsing via Paraphrasing

Yu Su, Xifeng Yan

Existing studies on semantic parsing mainly focus on the in-domain setting. We formulate cross-domain semantic parsing as a domain adaptation problem: train a semantic parser on some source domains and then adapt it to the target domain. Due to the diversity of logical forms in different domains, this problem presents unique and intriguing challenges. By converting logical forms into canonical utterances in natural language, we reduce semantic parsing to paraphrasing, and develop an attentive sequence-to-sequence paraphrase model that is general and flexible to adapt to different domains. We discover two problems, small micro variance and large macro variance, of pre-trained word embeddings that hinder their direct use in neural networks, and propose standardization techniques as a remedy. On the popular Overnight dataset, which contains eight domains, we show that both cross-domain training and standardized pre-trained word embeddings can bring significant improvement.

7.8CLApr 19, 2017Code
Global Relation Embedding for Relation Extraction

Yu Su, Honglei Liu, Semih Yavuz et al.

We study the problem of textual relation embedding with distant supervision. To combat the wrong labeling problem of distant supervision, we propose to embed textual relations with global statistics of relations, i.e., the co-occurrence statistics of textual and knowledge base relations collected from the entire corpus. This approach turns out to be more robust to the training noise introduced by distant supervision. On a popular relation extraction dataset, we show that the learned textual relation embedding can be used to augment existing relation extraction models and significantly improve their performance. Most remarkably, for the top 1,000 relational facts discovered by the best existing model, the precision can be improved from 83.9% to 89.3%.