2.6LGJun 3, 2024Code
How to Count Coughs: An Event-Based Framework for Evaluating Automatic Cough Detection Algorithm PerformanceLara Orlandic, Jonathan Dan, Jerome Thevenot et al.
Chronic cough disorders are widespread and challenging to assess because they rely on subjective patient questionnaires about cough frequency. Wearable devices running Machine Learning (ML) algorithms are promising for quantifying daily coughs, providing clinicians with objective metrics to track symptoms and evaluate treatments. However, there is a mismatch between state-of-the-art metrics for cough counting algorithms and the information relevant to clinicians. Most works focus on distinguishing cough from non-cough samples, which does not directly provide clinically relevant outcomes such as the number of cough events or their temporal patterns. In addition, typical metrics such as specificity and accuracy can be biased by class imbalance. We propose using event-based evaluation metrics aligned with clinical guidelines on significant cough counting endpoints. We use an ML classifier to illustrate the shortcomings of traditional sample-based accuracy measurements, highlighting their variance due to dataset class imbalance and sample window length. We also present an open-source event-based evaluation framework to test algorithm performance in identifying cough events and rejecting false positives. We provide examples and best practice guidelines in event-based cough counting as a necessary first step to assess algorithm performance with clinical relevance.
1.2SPNov 20, 2025
VersaPants: A Loose-Fitting Textile Capacitive Sensing System for Lower-Body Motion CaptureDeniz Kasap, Taraneh Aminosharieh Najafi, Jérôme Paul Rémy Thevenot et al.
We present VersaPants, the first loose-fitting, textile-based capacitive sensing system for lower-body motion capture, built on the open-hardware VersaSens platform. By integrating conductive textile patches and a compact acquisition unit into a pair of pants, the system reconstructs lower-body pose without compromising comfort. Unlike IMU-based systems that require user-specific fitting or camera-based methods that compromise privacy, our approach operates without fitting adjustments and preserves user privacy. VersaPants is a custom-designed smart garment featuring 6 capacitive channels per leg. We employ a lightweight Transformer-based deep learning model that maps capacitance signals to joint angles, enabling embedded implementation on edge platforms. To test our system, we collected approximately 3.7 hours of motion data from 11 participants performing 16 daily and exercise-based movements. The model achieves a mean per-joint position error (MPJPE) of 11.96 cm and a mean per-joint angle error (MPJAE) of 12.3 degrees across the hip, knee, and ankle joints, indicating the model's ability to generalize to unseen users and movements. A comparative analysis of existing textile-based deep learning architectures reveals that our model achieves competitive reconstruction performance with up to 22 times fewer parameters and 18 times fewer FLOPs, enabling real-time inference at 42 FPS on a commercial smartwatch without quantization. These results position VersaPants as a promising step toward scalable, comfortable, and embedded motion-capture solutions for fitness, healthcare, and wellbeing applications.
Multimodal Machine Learning-based Knee Osteoarthritis Progression Prediction from Plain Radiographs and Clinical DataAleksei Tiulpin, Stefan Klein, Sita M. A. Bierma-Zeinstra et al.
Knee osteoarthritis (OA) is the most common musculoskeletal disease without a cure, and current treatment options are limited to symptomatic relief. Prediction of OA progression is a very challenging and timely issue, and it could, if resolved, accelerate the disease modifying drug development and ultimately help to prevent millions of total joint replacement surgeries performed annually. Here, we present a multi-modal machine learning-based OA progression prediction model that utilizes raw radiographic data, clinical examination results and previous medical history of the patient. We validated this approach on an independent test set of 3,918 knee images from 2,129 subjects. Our method yielded area under the ROC curve (AUC) of 0.79 (0.78-0.81) and Average Precision (AP) of 0.68 (0.66-0.70). In contrast, a reference approach, based on logistic regression, yielded AUC of 0.75 (0.74-0.77) and AP of 0.62 (0.60-0.64). The proposed method could significantly improve the subject selection process for OA drug-development trials and help the development of personalized therapeutic plans.
Automatic Knee Osteoarthritis Diagnosis from Plain Radiographs: A Deep Learning-Based ApproachAleksei Tiulpin, Jérôme Thevenot, Esa Rahtu et al.
Knee osteoarthritis (OA) is the most common musculoskeletal disorder. OA diagnosis is currently conducted by assessing symptoms and evaluating plain radiographs, but this process suffers from subjectivity. In this study, we present a new transparent computer-aided diagnosis method based on the Deep Siamese Convolutional Neural Network to automatically score knee OA severity according to the Kellgren-Lawrence grading scale. We trained our method using the data solely from the Multicenter Osteoarthritis Study and validated it on randomly selected 3,000 subjects (5,960 knees) from Osteoarthritis Initiative dataset. Our method yielded a quadratic Kappa coefficient of 0.83 and average multiclass accuracy of 66.71\% compared to the annotations given by a committee of clinical experts. Here, we also report a radiological OA diagnosis area under the ROC curve of 0.93. We also present attention maps -- given as a class probability distribution -- highlighting the radiological features affecting the network decision. This information makes the decision process transparent for the practitioner, which builds better trust toward automatic methods. We believe that our model is useful for clinical decision making and for OA research; therefore, we openly release our training codes and the data set created in this study.
7.6CVJan 31, 2017
A novel method for automatic localization of joint area on knee plain radiographsAleksei Tiulpin, Jérôme Thevenot, Esa Rahtu et al.
Osteoarthritis (OA) is a common musculoskeletal condition typically diagnosed from radiographic assessment after clinical examination. However, a visual evaluation made by a practitioner suffers from subjectivity and is highly dependent on the experience. Computer-aided diagnostics (CAD) could improve the objectivity of knee radiographic examination. The first essential step of knee OA CAD is to automatically localize the joint area. However, according to the literature this task itself remains challenging. The aim of this study was to develop novel and computationally efficient method to tackle the issue. Here, three different datasets of knee radiographs were used (n = 473/93/77) to validate the overall performance of the method. Our pipeline consists of two parts: anatomically-based joint area proposal and their evaluation using Histogram of Oriented Gradients and the pre-trained Support Vector Machine classifier scores. The obtained results for the used datasets show the mean intersection over the union equal to: 0.84, 0.79 and 0.78. Using a high-end computer, the method allows to automatically annotate conventional knee radiographs within 14-16ms and high resolution ones within 170ms. Our results demonstrate that the developed method is suitable for large-scale analyses.