21.9SEMay 7
Biomedical Open Source Software: Crucial Packages and Hidden HeroesEva Maxfield Brown, Stephan Druskat, Laurent Hébert-Dufresne et al.
Despite the importance of scientific software for research, it is often not formally recognized and rewarded. This is especially true for foundational libraries, which are hidden below packages visible to the users (and thus doubly hidden, since even the packages directly used in research are frequently not visible in the paper). Research stakeholders like funders, infrastructure providers, and other organizations need to understand the complex network of computer programs that contemporary research relies upon. In this work, we use the CZ Software Mentions Dataset to map the upstream dependencies of software used in biomedical papers and find the packages critical to scientific software ecosystems. We propose centrality metrics for the network of software dependencies, analyze three ecosystems (PyPi, CRAN, Bioconductor), and determine the packages with the highest centrality.
AIMar 14, 2025
PUBLICSPEAK: Hearing the Public with a Probabilistic Framework in Local GovernmentTianliang Xu, Eva Maxfield Brown, Dustin Dwyer et al.
Local governments around the world are making consequential decisions on behalf of their constituents, and these constituents are responding with requests, advice, and assessments of their officials at public meetings. So many small meetings cannot be covered by traditional newsrooms at scale. We propose PUBLICSPEAK, a probabilistic framework which can utilize meeting structure, domain knowledge, and linguistic information to discover public remarks in local government meetings. We then use our approach to inspect the issues raised by constituents in 7 cities across the United States. We evaluate our approach on a novel dataset of local government meetings and find that PUBLICSPEAK improves over state-of-the-art by 10% on average, and by up to 40%.