Jonas Fischer

LG
h-index16
6papers
72citations
Novelty58%
AI Score41

6 Papers

6.2CVMar 17, 2025Code
Interpretable 3D Neural Object Volumes for Robust Conceptual Reasoning

Nhi Pham, Artur Jesslen, Bernt Schiele et al.

With the rise of deep neural networks, especially in safety-critical applications, robustness and interpretability are crucial to ensure their trustworthiness. Recent advances in 3D-aware classifiers that map image features to volumetric representation of objects, rather than relying solely on 2D appearance, have greatly improved robustness on out-of-distribution (OOD) data. Such classifiers have not yet been studied from the perspective of interpretability. Meanwhile, current concept-based XAI methods often neglect OOD robustness. We aim to address both aspects with CAVE - Concept Aware Volumes for Explanations - a new direction that unifies interpretability and robustness in image classification. We design CAVE as a robust and inherently interpretable classifier that learns sparse concepts from 3D object representation. We further propose 3D Consistency (3D-C), a metric to measure spatial consistency of concepts. Unlike existing metrics that rely on human-annotated parts on images, 3D-C leverages ground-truth object meshes as a common surface to project and compare explanations across concept-based methods. CAVE achieves competitive classification performance while discovering consistent and meaningful concepts across images in various OOD settings. Code available at https://github.com/phamleyennhi/CAVE.

6.6LGDec 7, 2023
Finding Interpretable Class-Specific Patterns through Efficient Neural Search

Nils Philipp Walter, Jonas Fischer, Jilles Vreeken

Discovering patterns in data that best describe the differences between classes allows to hypothesize and reason about class-specific mechanisms. In molecular biology, for example, this bears promise of advancing the understanding of cellular processes differing between tissues or diseases, which could lead to novel treatments. To be useful in practice, methods that tackle the problem of finding such differential patterns have to be readily interpretable by domain experts, and scalable to the extremely high-dimensional data. In this work, we propose a novel, inherently interpretable binary neural network architecture DIFFNAPS that extracts differential patterns from data. DiffNaps is scalable to hundreds of thousands of features and robust to noise, thus overcoming the limitations of current state-of-the-art methods in large-scale applications such as in biology. We show on synthetic and real world data, including three biological applications, that, unlike its competitors, DiffNaps consistently yields accurate, succinct, and interpretable class descriptions

3.6CVMar 14, 2025
Unlocking Text Capabilities in Vision Models

Fawaz Sammani, Jonas Fischer, Nikos Deligiannis

Visual classifiers provide high-dimensional feature representations that are challenging to interpret and analyze. Text, in contrast, provides a more expressive and human-friendly interpretable medium for understanding and analyzing model behavior. We propose a simple, yet powerful method for reformulating any pretrained visual classifier so that it can be queried with free-form text without compromising its original performance. Our approach is label-free, data and compute-efficient, and is trained to preserve the underlying classifiers distribution and decision-making processes. Our method unlocks several zero-shot text interpretability applications for any visual classifier. We apply our method on 40 visual classifiers and demonstrate two primary applications: 1) building both label-free and zero-shot concept bottleneck models and therefore converting any visual classifier to be inherently-interpretable and 2) zero-shot decoding of visual features into natural language sentences. In both tasks we establish new state-of-the-art results, outperforming existing works and surpassing CLIP-based baselines with ImageNet-only trained classifiers, while using up to 400x fewer images and 400,000x less text during training.

4.6LGMar 5, 2024Code
Pruning neural network models for gene regulatory dynamics using data and domain knowledge

Intekhab Hossain, Jonas Fischer, Rebekka Burkholz et al.

The practical utility of machine learning models in the sciences often hinges on their interpretability. It is common to assess a model's merit for scientific discovery, and thus novel insights, by how well it aligns with already available domain knowledge--a dimension that is currently largely disregarded in the comparison of neural network models. While pruning can simplify deep neural network architectures and excels in identifying sparse models, as we show in the context of gene regulatory network inference, state-of-the-art techniques struggle with biologically meaningful structure learning. To address this issue, we propose DASH, a generalizable framework that guides network pruning by using domain-specific structural information in model fitting and leads to sparser, better interpretable models that are more robust to noise. Using both synthetic data with ground truth information, as well as real-world gene expression data, we show that DASH, using knowledge about gene interaction partners within the putative regulatory network, outperforms general pruning methods by a large margin and yields deeper insights into the biological systems being studied.

13.6LGNov 22, 2021
Plant 'n' Seek: Can You Find the Winning Ticket?

Jonas Fischer, Rebekka Burkholz

The lottery ticket hypothesis has sparked the rapid development of pruning algorithms that aim to reduce the computational costs associated with deep learning during training and model deployment. Currently, such algorithms are primarily evaluated on imaging data, for which we lack ground truth information and thus the understanding of how sparse lottery tickets could be. To fill this gap, we develop a framework that allows us to plant and hide winning tickets with desirable properties in randomly initialized neural networks. To analyze the ability of state-of-the-art pruning to identify tickets of extreme sparsity, we design and hide such tickets solving four challenging tasks. In extensive experiments, we observe similar trends as in imaging studies, indicating that our framework can provide transferable insights into realistic problems. Additionally, we can now see beyond such relative trends and highlight limitations of current pruning methods. Based on our results, we conclude that the current limitations in ticket sparsity are likely of algorithmic rather than fundamental nature. We anticipate that comparisons to planted tickets will facilitate future developments of efficient pruning algorithms.

11.9LGOct 7, 2021Code
Federated Learning from Small Datasets

Michael Kamp, Jonas Fischer, Jilles Vreeken

Federated learning allows multiple parties to collaboratively train a joint model without sharing local data. This enables applications of machine learning in settings of inherently distributed, undisclosable data such as in the medical domain. In practice, joint training is usually achieved by aggregating local models, for which local training objectives have to be in expectation similar to the joint (global) objective. Often, however, local datasets are so small that local objectives differ greatly from the global objective, resulting in federated learning to fail. We propose a novel approach that intertwines model aggregations with permutations of local models. The permutations expose each local model to a daisy chain of local datasets resulting in more efficient training in data-sparse domains. This enables training on extremely small local datasets, such as patient data across hospitals, while retaining the training efficiency and privacy benefits of federated learning.