Juveria Siddiqui

David A. Wood, Jeremy Lynch, Sina Kafiabadi et al.

Labelling large datasets for training high-capacity neural networks is a major obstacle to the development of deep learning-based medical imaging applications. Here we present a transformer-based network for magnetic resonance imaging (MRI) radiology report classification which automates this task by assigning image labels on the basis of free-text expert radiology reports. Our model's performance is comparable to that of an expert radiologist, and better than that of an expert physician, demonstrating the feasibility of this approach. We make code available online for researchers to label their own MRI datasets for medical imaging applications.

J. Rafid Siddiqui

The subtleness of human facial expressions and a large degree of variation in the level of intensity to which a human expresses them is what makes it challenging to robustly classify and generate images of facial expressions. Lack of good quality data can hinder the performance of a deep learning model. In this article, we have proposed a Facial Expression Generation method for Meta-Humans (FExGAN-Meta) that works robustly with the images of Meta-Humans. We have prepared a large dataset of facial expressions exhibited by ten Meta-Humans when placed in a studio environment and then we have evaluated FExGAN-Meta on the collected images. The results show that FExGAN-Meta robustly generates and classifies the images of Meta-Humans for the simple as well as the complex facial expressions.

J. Rafid Siddiqui

Facial expressions are a form of non-verbal communication that humans perform seamlessly for meaningful transfer of information. Most of the literature addresses the facial expression recognition aspect however, with the advent of Generative Models, it has become possible to explore the affect space in addition to mere classification of a set of expressions. In this article, we propose a generative model architecture which robustly generates a set of facial expressions for multiple character identities and explores the possibilities of generating complex expressions by combining the simple ones.

David A. Wood, Sina Kafiabadi, Aisha Al Busaidi et al.

Natural language processing (NLP) shows promise as a means to automate the labelling of hospital-scale neuroradiology magnetic resonance imaging (MRI) datasets for computer vision applications. To date, however, there has been no thorough investigation into the validity of this approach, including determining the accuracy of report labels compared to image labels as well as examining the performance of non-specialist labellers. In this work, we draw on the experience of a team of neuroradiologists who labelled over 5000 MRI neuroradiology reports as part of a project to build a dedicated deep learning-based neuroradiology report classifier. We show that, in our experience, assigning binary labels (i.e. normal vs abnormal) to images from reports alone is highly accurate. In contrast to the binary labels, however, the accuracy of more granular labelling is dependent on the category, and we highlight reasons for this discrepancy. We also show that downstream model performance is reduced when labelling of training reports is performed by a non-specialist. To allow other researchers to accelerate their research, we make our refined abnormality definitions and labelling rules available, as well as our easy-to-use radiology report labelling app which helps streamline this process.

J. Rafid Siddiqui

Animals have evolved to restrict their sensing capabilities to certain region of electromagnetic spectrum. This is surprisingly a very narrow band on a vast scale which makes one think if there is a systematic bias underlying such selective filtration. The situation becomes even more intriguing when we find a sharp cutoff point at Near-infrared point whereby almost all animal vision systems seem to have a lower bound. This brings us to an interesting question: did evolution "intentionally" performed such a restriction in order to evolve higher visual cognition? In this work this question is addressed by experimenting with Near-infrared images for their potential applicability in higher visual processing such as semantic segmentation. A modified version of Fully Convolutional Networks are trained on NIR images and RGB images respectively and compared for their respective effectiveness in the wake of semantic segmentation. The results from the experiments show that visible part of the spectrum alone is sufficient for the robust semantic segmentation of the indoor as well as outdoor scenes.