Yusheng Tan

Wenhui Lei, Anqi Li, Yusheng Tan et al.

Foundation Models (FMs) in computational pathology (CPath) have significantly advanced the extraction of meaningful features from histopathology image datasets, achieving strong performance across various clinical tasks. Despite their impressive performance, these models often exhibit variability when applied to different tasks, prompting the need for a unified framework capable of consistently excelling across various applications. In this work, we propose Shazam, a novel framework designed to efficiently combine multiple CPath models. Unlike previous approaches that train a fixed-parameter FM, Shazam dynamically extracts and refines information from diverse FMs for each specific task. To ensure that each FM contributes effectively without dominance, a novel distillation strategy is applied, guiding the student model with features from all teacher models, which enhances its generalization ability. Experimental results on two pathology patch classification datasets demonstrate that Shazam outperforms existing CPath models and other fusion methods. Its lightweight, flexible design makes it a promising solution for improving CPath analysis in real-world settings. Code will be available at https://github.com/Tuner12/Shazam.

Gexin Huang, Anqi Li, Yusheng Tan et al.

Pathology foundation models (FMs) have become central to computational histopathology, offering strong transfer performance across a wide range of diagnostic and prognostic tasks. The rapid proliferation of pathology foundation models creates a model-selection bottleneck: no single model is uniformly best, yet exhaustively adapting and validating many candidates for each downstream endpoint is prohibitively expensive. We address this challenge with a lightweight and novel model fusion strategy, LogitProd, which treats independently trained FM-based predictors as fixed experts and learns sample-adaptive fusion weights over their slide-level outputs. The fusion operates purely on logits, requiring no encoder retraining and no feature-space alignment across heterogeneous backbones. We further provide a theoretical analysis showing that the optimal weighted product fusion is guaranteed to perform at least as well as the best individual expert under the training objective. We systematically evaluate LogitProd on \textbf{22} benchmarks spanning WSI-level classification, tile-level classification, gene mutation prediction, and discrete-time survival modeling. LogitProd ranks first on 20/22 tasks and improves the average performance across all tasks by ~3% over the strongest single expert. LogitProd enables practitioners to upgrade heterogeneous FM-based pipelines in a plug-and-play manner, achieving multi-expert gains with $\sim$12$\times$ lower training cost than feature-fusion alternatives.