Nan Yu

Tianyu Shi, Yang Mo, Yiou Liu et al.

LLM-based agents are increasingly deployed in workflows where generated outputs may directly trigger state-changing actions. This creates an execution-boundary problem: proposed actions must be governed before they are executed. We study this problem through economically consequential multi-agent interactions and argue that deployment-grade agent systems should separate proposal generation from environment-facing execution. To operationalize this principle, we introduce the Organizational Control Layer (OCL), a model-agnostic governance infrastructure that intercepts generated actions before execution through policy enforcement and escalation, without modifying the underlying LLM generator. We evaluate OCL on adversarial buyer--seller negotiation environments adapted from AgenticPay. Across multiple frontier LLM backends, OCL reduces unsafe executions from 88% to near-zero while increasing valid success from 12% to 96%. Results further reveal a safety--utility tradeoff: strict governance improves compliance and reliability against policy and constraint violations, but can reduce flexibility in tightly constrained markets. These findings suggest that deployment-grade LLM agent systems require explicit governance at the boundary between language generation and executable actions. The source code is available at: https://github.com/SHITIANYU-hue/amai_ocl

Dexin Kong, Nan Yu, Yun Yuan et al.

Emotion Cause Extraction in Conversations (ECEC) aims to extract the utterances which contain the emotional cause in conversations. Most prior research focuses on modelling conversational contexts with sequential encoding, ignoring the informative interactions between utterances and conversational-specific features for ECEC. In this paper, we investigate the importance of discourse structures in handling utterance interactions and conversationspecific features for ECEC. To this end, we propose a discourse-aware model (DAM) for this task. Concretely, we jointly model ECEC with discourse parsing using a multi-task learning (MTL) framework and explicitly encode discourse structures via gated graph neural network (gated GNN), integrating rich utterance interaction information to our model. In addition, we use gated GNN to further enhance our ECEC model with conversation-specific features. Results on the benchmark corpus show that DAM outperform the state-of-theart (SOTA) systems in the literature. This suggests that the discourse structure may contain a potential link between emotional utterances and their corresponding cause expressions. It also verifies the effectiveness of conversationalspecific features. The codes of this paper will be available on GitHub.

Xin Cao, Nan Yu

We propose utilizing fast and slow thinking to enhance the capabilities of large language model-based agents on complex tasks such as program repair. In particular, we design an adaptive program repair method based on issue description response, called SIADAFIX. The proposed method utilizes slow thinking bug fix agent to complete complex program repair tasks, and employs fast thinking workflow decision components to optimize and classify issue descriptions, using issue description response results to guide the orchestration of bug fix agent workflows. SIADAFIX adaptively selects three repair modes, i.e., easy, middle and hard mode, based on problem complexity. It employs fast generalization for simple problems and test-time scaling techniques for complex problems. Experimental results on the SWE-bench Lite show that the proposed method achieves 60.67% pass@1 performance using the Claude-4 Sonnet model, reaching state-of-the-art levels among all open-source methods. SIADAFIX effectively balances repair efficiency and accuracy, providing new insights for automated program repair. Our code is available at https://github.com/liauto-siada/siada-cli.

Shuyang Jiang, Nan Yu, Yiming Zhang et al.

Contrastive language-image pretraining (CLIP) suffers from two structural weaknesses: the symmetric InfoNCE loss discards the relative ordering among unmatched in-batch pairs, and global pooling collapses the visual representation into a semantic bottleneck that is poorly sensitive to fine-grained local structure. RANKCLIP partially addresses the first issue with a list-wise Plackett-Luce ranking-consistency loss, but its model is strictly first-order and inherits the second weakness untouched. We propose DINORANKCLIP, a pretraining framework that addresses both jointly. Our principal contribution is injecting a frozen DINOv3 teacher into the contrastive trunk through a dual-branch lightweight student and a multi-scale fusion module with channel-spatial attention, a self-attention refiner, and a conflict-aware gate that preserves the cross-modal alignment up to first order. Complementarily, we introduce a high-order Plackett-Luce ranking model in which the per-position utility is augmented with attention-parameterised pairwise and tuple-wise transition terms; the family contains CLIP and RANKCLIP as nested zero-order and first-order special cases, and the optimal order on every benchmark is $R^*=3$. The full empirical study -- order sweep, Fine-grained Probe on five datasets, four-node Modality-Gap analysis, six-variant Fusion ablation -- fits in 72 hours on a single eight-GPU H100 node and trains entirely on Conceptual Captions 3M. DINORANKCLIP consistently outperforms CLIP, CyCLIP, ALIP, and RANKCLIP under matched compute, with the largest relative gains on the fine-grained and out-of-distribution evaluations that most directly stress local structural reasoning.

Chuanliu Fan, Ziqiang Cao, Zicheng Ma et al.

Goal-oriented de novo molecule design, namely generating molecules with specific property or substructure constraints, is a crucial yet challenging task in drug discovery. Existing methods, such as Bayesian optimization and reinforcement learning, often require training multiple property predictors and struggle to incorporate substructure constraints. Inspired by the success of Large Language Models (LLMs) in text generation, we propose ChatMol, a novel approach that leverages LLMs for molecule design across diverse constraint settings. Initially, we crafted a molecule representation compatible with LLMs and validated its efficacy across multiple online LLMs. Afterwards, we developed specific prompts geared towards diverse constrained molecule generation tasks to further fine-tune current LLMs while integrating feedback learning derived from property prediction. Finally, to address the limitations of LLMs in numerical recognition, we referred to the position encoding method and incorporated additional encoding for numerical values within the prompt. Experimental results across single-property, substructure-property, and multi-property constrained tasks demonstrate that ChatMol consistently outperforms state-of-the-art baselines, including VAE and RL-based methods. Notably, in multi-objective binding affinity maximization task, ChatMol achieves a significantly lower KD value of 0.25 for the protein target ESR1, while maintaining the highest overall performance, surpassing previous methods by 4.76%. Meanwhile, with numerical enhancement, the Pearson correlation coefficient between the instructed property values and those of the generated molecules increased by up to 0.49. These findings highlight the potential of LLMs as a versatile framework for molecule generation, offering a promising alternative to traditional latent space and RL-based approaches.

Junjie Wu, Yumeng Fu, Nan Yu et al.

Recent studies in Large Vision-Language Models (LVLMs) have demonstrated impressive advancements in multimodal Out-of-Context (OOC) misinformation detection, discerning whether an authentic image is wrongly used in a claim. Despite their success, the textual evidence of authentic images retrieved from the inverse search is directly transmitted to LVLMs, leading to inaccurate or false information in the decision-making phase. To this end, we present E2LVLM, a novel evidence-enhanced large vision-language model by adapting textual evidence in two levels. First, motivated by the fact that textual evidence provided by external tools struggles to align with LVLMs inputs, we devise a reranking and rewriting strategy for generating coherent and contextually attuned content, thereby driving the aligned and effective behavior of LVLMs pertinent to authentic images. Second, to address the scarcity of news domain datasets with both judgment and explanation, we generate a novel OOC multimodal instruction-following dataset by prompting LVLMs with informative content to acquire plausible explanations. Further, we develop a multimodal instruction-tuning strategy with convincing explanations for beyond detection. This scheme contributes to E2LVLM for multimodal OOC misinformation detection and explanation. A multitude of experiments demonstrate that E2LVLM achieves superior performance than state-of-the-art methods, and also provides compelling rationales for judgments.

Junjie Wu, Yumeng Fu, Nan Yu et al.

Recent advancements in multimodal out-of-context (OOC) misinformation detection have made remarkable progress in checking the consistencies between different modalities for supporting or refuting image-text pairs. However, existing OOC misinformation detection methods tend to emphasize the role of internal consistency, ignoring the significant of external consistency between image-text pairs and external evidence. In this paper, we propose HiEAG, a novel Hierarchical Evidence-Augmented Generation framework to refine external consistency checking through leveraging the extensive knowledge of multimodal large language models (MLLMs). Our approach decomposes external consistency checking into a comprehensive engine pipeline, which integrates reranking and rewriting, apart from retrieval. Evidence reranking module utilizes Automatic Evidence Selection Prompting (AESP) that acquires the relevant evidence item from the products of evidence retrieval. Subsequently, evidence rewriting module leverages Automatic Evidence Generation Prompting (AEGP) to improve task adaptation on MLLM-based OOC misinformation detectors. Furthermore, our approach enables explanation for judgment, and achieves impressive performance with instruction tuning. Experimental results on different benchmark datasets demonstrate that our proposed HiEAG surpasses previous state-of-the-art (SOTA) methods in the accuracy over all samples.

Chuanliu Fan, Zicheng Ma, Jun Gao et al.

Recent advances in protein large language models, such as ProtTeX, represent both side-chain amino acids and backbone structure as discrete token sequences of residue length. While this design enables unified modeling of multimodal protein information, it suffers from two major limitations: (1) The concatenation of sequence and structure tokens approximately doubles the protein length and breaks the intrinsic residue-level alignment between modalities. (2) Constrained by the training corpus and limited context window, ProtTeX is typically trained on single-protein inputs, rendering it incompatible with in-context learning (ICL) and thus limiting its generalization capability. To address these issues, we propose ProtTeX-CC, a lightweight two-stage compression framework designed to enhance ProtTeX under few-shot settings. We first design a joint embedding compression mechanism that fuses sequence and structure representations at the residue level, effectively reducing the protein input length by half without sacrificing performance. Then we propose a self-compression module that aggregates each full demonstration into the latent space of the last few linguistic tokens, reducing the average demonstration length from 751 tokens to less than 16 tokens. Compared to the original ProtTeX, our self-compression approach achieves a compression ratio of approximately 93.68% in the total prompt length under the 16-shot setting. Without modifying the backbone model, ProtTeX-CC introduces only a small number of additional parameters through PEFT-based tuning in the joint embedding compression stage and a single trainable projection layer in the self-compression stage. Extensive experiments on protein function prediction show that ProtTeX-CC improves performance on the in-domain benchmark by 2%, and generalizes well to the out-of-domain dataset with a performance gain of 11%.

Yucheng Wang, Bowen Yu, Hongsong Zhu et al.

Named entity recognition (NER) remains challenging when entity mentions can be discontinuous. Existing methods break the recognition process into several sequential steps. In training, they predict conditioned on the golden intermediate results, while at inference relying on the model output of the previous steps, which introduces exposure bias. To solve this problem, we first construct a segment graph for each sentence, in which each node denotes a segment (a continuous entity on its own, or a part of discontinuous entities), and an edge links two nodes that belong to the same entity. The nodes and edges can be generated respectively in one stage with a grid tagging scheme and learned jointly using a novel architecture named Mac. Then discontinuous NER can be reformulated as a non-parametric process of discovering maximal cliques in the graph and concatenating the spans in each clique. Experiments on three benchmarks show that our method outperforms the state-of-the-art (SOTA) results, with up to 3.5 percentage points improvement on F1, and achieves 5x speedup over the SOTA model.

Liner Yang, Meishan Zhang, Yang Liu et al.

While part-of-speech (POS) tagging and dependency parsing are observed to be closely related, existing work on joint modeling with manually crafted feature templates suffers from the feature sparsity and incompleteness problems. In this paper, we propose an approach to joint POS tagging and dependency parsing using transition-based neural networks. Three neural network based classifiers are designed to resolve shift/reduce, tagging, and labeling conflicts. Experiments show that our approach significantly outperforms previous methods for joint POS tagging and dependency parsing across a variety of natural languages.