Tamir Shor

Tamir Shor, Tomer Weiss, Dor Noti et al.

Dynamic Magnetic Resonance Imaging (MRI) is known to be a powerful and reliable technique for the dynamic imaging of internal organs and tissues, making it a leading diagnostic tool. A major difficulty in using MRI in this setting is the relatively long acquisition time (and, hence, increased cost) required for imaging in high spatio-temporal resolution, leading to the appearance of related motion artifacts and decrease in resolution. Compressed Sensing (CS) techniques have become a common tool to reduce MRI acquisition time by subsampling images in the k-space according to some acquisition trajectory. Several studies have particularly focused on applying deep learning techniques to learn these acquisition trajectories in order to attain better image reconstruction, rather than using some predefined set of trajectories. To the best of our knowledge, learning acquisition trajectories has been only explored in the context of static MRI. In this study, we consider acquisition trajectory learning in the dynamic imaging setting. We design an end-to-end pipeline for the joint optimization of multiple per-frame acquisition trajectories along with a reconstruction neural network, and demonstrate improved image reconstruction quality in shorter acquisition times. The code for reproducing all experiments is accessible at https://github.com/tamirshor7/MultiPILOT.

Klara Janouskova, Tamir Shor, Chaim Baskin et al.

Test-Time Adaptation (TTA) methods improve the robustness of deep neural networks to domain shift on a variety of tasks such as image classification or segmentation. This work explores adapting segmentation models to a single unlabelled image with no other data available at test-time. In particular, this work focuses on adaptation by optimizing self-supervised losses at test-time. Multiple baselines based on different principles are evaluated under diverse conditions and a novel adversarial training is introduced for adaptation with mask refinement. Our additions to the baselines result in a 3.51 and 3.28 % increase over non-adapted baselines, without these improvements, the increase would be 1.7 and 2.16 % only.

Tamir Shor, Chaim Baskin, Alex Bronstein

Dynamic Magnetic Resonance Imaging (MRI) is a crucial non-invasive method used to capture the movement of internal organs and tissues, making it a key tool for medical diagnosis. However, dynamic MRI faces a major challenge: long acquisition times needed to achieve high spatial and temporal resolution. This leads to higher costs, patient discomfort, motion artifacts, and lower image quality. Compressed Sensing (CS) addresses this problem by acquiring a reduced amount of MR data in the Fourier domain, based on a chosen sampling pattern, and reconstructing the full image from this partial data. While various deep learning methods have been developed to optimize these sampling patterns and improve reconstruction, they often struggle with slow optimization and inference times or are limited to specific temporal dimensions used during training. In this work, we introduce a novel deep-compressed sensing approach that uses 3D window attention and flexible, temporally extendable acquisition trajectories. Our method significantly reduces both training and inference times compared to existing approaches, while also adapting to different temporal dimensions during inference without requiring additional training. Tests with real data show that our approach outperforms current state-of-theart techniques. The code for reproducing all experiments will be made available upon acceptance of the paper.

Tamir Shor, George Leifman, Genady Beryozkin

Object-Counting for remote-sensing (RS) imagery is attracting increasing research interest due to its crucial role in a wide and diverse set of applications. While several promising methods for RS object-counting have been proposed, existing methods focus on a closed, pre-defined set of object classes. This limitation necessitates costly re-annotation and model re-training to adapt current approaches for counting of novel objects that have not been seen during training, and severely inhibits their application in dynamic, real-world monitoring scenarios. To address this gap, in this work we propose RS-OVC - the first Open Vocabulary Counting (OVC) model for Remote-Sensing and aerial imagery. We show that our model is capable of accurate counting of novel object classes, that were unseen during training, based solely on textual and/or visual conditioning.

Gabriele Serussi, Tamir Shor, Tom Hirshberg et al.

Multi-rotor aerial autonomous vehicles (MAVs) primarily rely on vision for navigation purposes. However, visual localization and odometry techniques suffer from poor performance in low or direct sunlight, a limited field of view, and vulnerability to occlusions. Acoustic sensing can serve as a complementary or even alternative modality for vision in many situations, and it also has the added benefits of lower system cost and energy footprint, which is especially important for micro aircraft. This paper proposes actively controlling and shaping the aircraft propulsion noise generated by the rotors to benefit localization tasks, rather than considering it a harmful nuisance. We present a neural network architecture for selfnoise-based localization in a known environment. We show that training it simultaneously with learning time-varying rotor phase modulation achieves accurate and robust localization. The proposed methods are evaluated using a computationally affordable simulation of MAV rotor noise in 2D acoustic environments that is fitted to real recordings of rotor pressure fields.

Tamir Shor, Moti Freiman, Chaim Baskin et al.

Cardiac T1 mapping provides critical quantitative insights into myocardial tissue composition, enabling the assessment of pathologies such as fibrosis, inflammation, and edema. However, the inherently dynamic nature of the heart imposes strict limits on acquisition times, making high-resolution T1 mapping a persistent challenge. Compressed sensing (CS) approaches have reduced scan durations by undersampling k-space and reconstructing images from partial data, and recent studies show that jointly optimizing the undersampling patterns with the reconstruction network can substantially improve performance. Still, most current T1 mapping pipelines rely on static, hand-crafted masks that do not exploit the full acceleration and accuracy potential. In this work, we introduce T1-PILOT: an end-to-end method that explicitly incorporates the T1 signal relaxation model into the sampling-reconstruction framework to guide the learning of non-Cartesian trajectories, crossframe alignment, and T1 decay estimation. Through extensive experiments on the CMRxRecon dataset, T1-PILOT significantly outperforms several baseline strategies (including learned single-mask and fixed radial or golden-angle sampling schemes), achieving higher T1 map fidelity at greater acceleration factors. In particular, we observe consistent gains in PSNR and VIF relative to existing methods, along with marked improvements in delineating finer myocardial structures. Our results highlight that optimizing sampling trajectories in tandem with the physical relaxation model leads to both enhanced quantitative accuracy and reduced acquisition times. Code for reproducing all results will be made publicly available upon publication.

Tamir Shor, Ethan Fetaya, Chaim Baskin et al.

Implicit Neural Representations (INRs) have been recently garnering increasing interest in various research fields, mainly due to their ability to represent large, complex data in a compact and continuous manner. Past work further showed that numerous popular downstream tasks can be performed directly in the INR parameter-space. Doing so can substantially reduce the computational resources required to process the represented data in their native domain. A major difficulty in using modern machine-learning approaches, is their high susceptibility to adversarial attacks, which have been shown to greatly limit the reliability and applicability of such methods in a wide range of settings. In this work, we show that parameter-space models trained for classification are inherently robust to adversarial attacks -- without the need of any robust training. To support our claims, we develop a novel suite of adversarial attacks targeting parameter-space classifiers, and furthermore analyze practical considerations of attacking parameter-space classifiers.

Tamir Shor, Chaim Baskin, Alex Bronstein

Breast cancer is a prominent health concern worldwide, currently being the secondmost common and second-deadliest type of cancer in women. While current breast cancer diagnosis mainly relies on mammography imaging, in recent years the use of thermography for breast cancer imaging has been garnering growing popularity. Thermographic imaging relies on infrared cameras to capture body-emitted heat distributions. While these heat signatures have proven useful for computer-vision systems for accurate breast cancer segmentation and classification, prior work often relies on handcrafted feature engineering or complex architectures, potentially limiting the comparability and applicability of these methods. In this work, we present a novel algorithm for both breast cancer classification and segmentation. Rather than focusing efforts on manual feature and architecture engineering, our algorithm focuses on leveraging an informative, learned feature space, thus making our solution simpler to use and extend to other frameworks and downstream tasks, as well as more applicable to data-scarce settings. Our classification produces SOTA results, while we are the first work to produce segmentation regions studied in this paper.