Alexander Daryin

Juraj Gottweis, Wei-Hung Weng, Alexander Daryin et al.

Scientific discovery relies on scientists generating novel hypotheses that undergo rigorous experimental validation. To augment this process, we introduce an AI co-scientist, a multi-agent system built on Gemini 2.0. The AI co-scientist is intended to help uncover new, original knowledge and to formulate demonstrably novel research hypotheses and proposals, building upon prior evidence and aligned to scientist-provided research objectives and guidance. The system's design incorporates a generate, debate, and evolve approach to hypothesis generation, inspired by the scientific method and accelerated by scaling test-time compute. Key contributions include: (1) a multi-agent architecture with an asynchronous task execution framework for flexible compute scaling; (2) a tournament evolution process for self-improving hypotheses generation. Automated evaluations show continued benefits of test-time compute, improving hypothesis quality. While general purpose, we focus development and validation in three biomedical areas: drug repurposing, novel target discovery, and explaining mechanisms of bacterial evolution and anti-microbial resistance. For drug repurposing, the system proposes candidates with promising validation findings, including candidates for acute myeloid leukemia that show tumor inhibition in vitro at clinically applicable concentrations. For novel target discovery, the AI co-scientist proposed new epigenetic targets for liver fibrosis, validated by anti-fibrotic activity and liver cell regeneration in human hepatic organoids. Finally, the AI co-scientist recapitulated unpublished experimental results via a parallel in silico discovery of a novel gene transfer mechanism in bacterial evolution. These results, detailed in separate, co-timed reports, demonstrate the potential to augment biomedical and scientific discovery and usher an era of AI empowered scientists.

Victor Carbune, Pedro Gonnet, Thomas Deselaers et al.

We describe an online handwriting system that is able to support 102 languages using a deep neural network architecture. This new system has completely replaced our previous Segment-and-Decode-based system and reduced the error rate by 20%-40% relative for most languages. Further, we report new state-of-the-art results on IAM-OnDB for both the open and closed dataset setting. The system combines methods from sequence recognition with a new input encoding using Bézier curves. This leads to up to 10x faster recognition times compared to our previous system. Through a series of experiments we determine the optimal configuration of our models and report the results of our setup on a number of additional public datasets.

Victor Carbune, Thierry Coppey, Alexander Daryin et al.

We present SmartChoices, an approach to making machine learning (ML) a first class citizen in programming languages which we see as one way to lower the entrance cost to applying ML to problems in new domains. There is a growing divide in approaches to building systems: on the one hand, programming leverages human experts to define a system while on the other hand behavior is learned from data in machine learning. We propose to hybridize these two by providing a 3-call API which we expose through an object called SmartChoice. We describe the SmartChoices-interface, how it can be used in programming with minimal code changes, and demonstrate that it is an easy to use but still powerful tool by demonstrating improvements over not using ML at all on three algorithmic problems: binary search, QuickSort, and caches. In these three examples, we replace the commonly used heuristics with an ML model entirely encapsulated within a SmartChoice and thus requiring minimal code changes. As opposed to previous work applying ML to algorithmic problems, our proposed approach does not require to drop existing implementations but seamlessly integrates into the standard software development workflow and gives full control to the software developer over how ML methods are applied. Our implementation relies on standard Reinforcement Learning (RL) methods. To learn faster, we use the heuristic function, which they are replacing, as an initial function. We show how this initial function can be used to speed up and stabilize learning while providing a safety net that prevents performance to become substantially worse -- allowing for a safe deployment in critical applications in real life.