c-lasso -- a Python package for constrained sparse and robust regression and classificationLéo Simpson, Patrick L. Combettes, Christian L. Müller
We introduce c-lasso, a Python package that enables sparse and robust linear regression and classification with linear equality constraints. The underlying statistical forward model is assumed to be of the following form: \[ y = X β+ σε\qquad \textrm{subject to} \qquad Cβ=0 \] Here, $X \in \mathbb{R}^{n\times d}$is a given design matrix and the vector $y \in \mathbb{R}^{n}$ is a continuous or binary response vector. The matrix $C$ is a general constraint matrix. The vector $β\in \mathbb{R}^{d}$ contains the unknown coefficients and $σ$ an unknown scale. Prominent use cases are (sparse) log-contrast regression with compositional data $X$, requiring the constraint $1_d^T β= 0$ (Aitchion and Bacon-Shone 1984) and the Generalized Lasso which is a special case of the described problem (see, e.g, (James, Paulson, and Rusmevichientong 2020), Example 3). The c-lasso package provides estimators for inferring unknown coefficients and scale (i.e., perspective M-estimators (Combettes and Müller 2020a)) of the form \[ \min_{β\in \mathbb{R}^d, σ\in \mathbb{R}_{0}} f\left(Xβ- y,σ \right) + λ\left\lVert β\right\rVert_1 \qquad \textrm{subject to} \qquad Cβ= 0 \] for several convex loss functions $f(\cdot,\cdot)$. This includes the constrained Lasso, the constrained scaled Lasso, and sparse Huber M-estimators with linear equality constraints.
5.9STJun 6, 2015
Classification and regression using an outer approximation projection-gradient methodMichel Barlaud, Wafa Belhajali, Patrick L. Combettes et al.
This paper deals with sparse feature selection and grouping for classification and regression. The classification or regression problems under consideration consists in minimizing a convex empirical risk function subject to an $\ell^1$ constraint, a pairwise $\ell^\infty$ constraint, or a pairwise $\ell^1$ constraint. Existing work, such as the Lasso formulation, has focused mainly on Lagrangian penalty approximations, which often require ad hoc or computationally expensive procedures to determine the penalization parameter. We depart from this approach and address the constrained problem directly via a splitting method. The structure of the method is that of the classical gradient-projection algorithm, which alternates a gradient step on the objective and a projection step onto the lower level set modeling the constraint. The novelty of our approach is that the projection step is implemented via an outer approximation scheme in which the constraint set is approximated by a sequence of simple convex sets consisting of the intersection of two half-spaces. Convergence of the iterates generated by the algorithm is established for a general smooth convex minimization problem with inequality constraints. Experiments on both synthetic and biological data show that our method outperforms penalty methods.
1.2NAOct 16, 2014
A Strongly Convergent Primal-Dual Method for Nonoverlapping Domain DecompositionHédy Attouch, Luis M. Briceño-Arias, Patrick L. Combettes
We propose a primal-dual parallel proximal splitting method for solving domain decomposition problems for partial differential equations. The problem is formulated via minimization of energy functions on the subdomains with coupling constraints which model various properties of the solution at the interfaces. The proposed method can handle a wide range of linear and nonlinear problems, with flexible, possibly nonlinear, transmission conditions across the interfaces. Strong convergence in the energy spaces is established in this general setting, and without any additional assumption on the energy functions or the geometry of the problem. Several examples are presented.
26.4OCMay 18, 2010
Proximal Splitting Methods in Signal ProcessingPatrick L. Combettes, Jean-Christophe Pesquet
The proximity operator of a convex function is a natural extension of the notion of a projection operator onto a convex set. This tool, which plays a central role in the analysis and the numerical solution of convex optimization problems, has recently been introduced in the arena of signal processing, where it has become increasingly important. In this paper, we review the basic properties of proximity operators which are relevant to signal processing and present optimization methods based on these operators. These proximal splitting methods are shown to capture and extend several well-known algorithms in a unifying framework. Applications of proximal methods in signal recovery and synthesis are discussed.
12.4OCDec 22, 2009
On the Effectiveness of Projection Methods for Convex Feasibility Problems with Linear Inequality ConstraintsY. Censor, W. Chen, P. L. Combettes et al.
The effectiveness of projection methods for solving systems of linear inequalities is investigated. It is shown that they have a computational advantage over some alternatives and that this makes them successful in real-world applications. This is supported by experimental evidence provided in this paper on problems of various sizes (up to tens of thousands of unknowns satisfying up to hundreds of thousands of constraints) and by a discussion of the demonstrated efficacy of projection methods in numerous scientific publications and commercial patents (dealing with problems that can have over a billion unknowns and a similar number of constraints).