Vincenzo Ciancia

Vincenzo Ciancia, Jan Friso Groote, Diego Latella et al.

Spatial models are of increasing interest in traditional computer science domains and beyond. Spatial minimisation procedures are crucial for efficient model checking of such models that are often large in size. For the recent notion of spatial bisimilarity for quasi-discrete closure models, called `Compatible Paths' (CoPa) bisimilarity, an effective minimisation method is proposed, and shown to be correct. Reasoning about space represented by quasi-discrete closure models involves two different conditional reachability modalities: a forward reachability, similar to that used in temporal logic, and a backward modality, representing the fact that a point can be reached from another point, under certain conditions. The core of our minimisation method is the encoding of closure models as labelled transition systems, enabling minimisation algorithms for branching bisimilarity to compute CoPa equivalence classes. A prototype toolchain, VoxMinX, is proposed to validate the minimisation method. VoxMinX preserves the relationship between equivalence classes and sets of pixels in the original image. Experimental validation of the toolchain via benchmark examples demonstrates a promising speed-up in model checking of spatial properties for models of realistic size.

Manuela Imbriani, Gina Belmonte, Mieke Massink et al.

This paper presents preliminary results in the definition of a comprehensive benchmark framework designed to systematically evaluate spatial reasoning capabilities in neural networks, with a particular focus on morphological properties such as connectivity and distance relationships. The framework is currently being used to study the capabilities of nnU-Net, exploiting the spatial model checker VoxLogicA to generate two distinct categories of synthetic datasets: maze connectivity problems for topological analysis and spatial distance computation tasks for geometric understanding. Each category is evaluated across multiple resolutions to assess scalability and generalization properties. The automated pipeline encompasses a complete machine learning workflow including: synthetic dataset generation, standardized training with cross-validation, inference execution, and comprehensive evaluation using Dice coefficient and IoU (Intersection over Union) metrics. Preliminary experimental results demonstrate significant challenges in neural network spatial reasoning capabilities, revealing systematic failures in basic geometric and topological understanding tasks. The framework provides a reproducible experimental protocol, enabling researchers to identify specific limitations. Such limitations could be addressed through hybrid approaches combining neural networks with symbolic reasoning methods for improved spatial understanding in clinical applications, establishing a foundation for ongoing research into neural network spatial reasoning limitations and potential solutions.

Nick Bezhanishvili, Vincenzo Ciancia, David Gabelaia et al.

Topological Spatial Model Checking is a recent paradigm where model checking techniques are developed for the topological interpretation of Modal Logic. The Spatial Logic of Closure Spaces, SLCS, extends Modal Logic with reachability connectives that, in turn, can be used for expressing interesting spatial properties, such as "being near to" or "being surrounded by". SLCS constitutes the kernel of a solid logical framework for reasoning about discrete space, such as graphs and digital images, interpreted as quasi discrete closure spaces. Following a recently developed geometric semantics of Modal Logic, we propose an interpretation of SLCS in continuous space, admitting a geometric spatial model checking procedure, by resorting to models based on polyhedra. Such representations of space are increasingly relevant in many domains of application, due to recent developments of 3D scanning and visualisation techniques that exploit mesh processing. We introduce PolyLogicA, a geometric spatial model checker for SLCS formulas on polyhedra and demonstrate feasibility of our approach on two 3D polyhedral models of realistic size. Finally, we introduce a geometric definition of bisimilarity, proving that it characterises logical equivalence.

Laura Bussi, Vincenzo Ciancia, Fabio Gadducci

The tool voxlogica merges the state-of-the-art library of computational imaging algorithms ITK with the combination of declarative specification and optimised execution provided by spatial logic model checking. The analysis of an existing benchmark for segmentation of brain tumours via a simple logical specification reached state-of-the-art accuracy. We present a new, GPU-based version of voxlogica and discuss its implementation, scalability, and applications.

Fabrizio Banci Buonamici, Gina Belmonte, Vincenzo Ciancia et al.

Recent research on spatial and spatio-temporal model checking provides novel image analysis methodologies, rooted in logical methods for topological spaces. Medical Imaging (MI) is a field where such methods show potential for ground-breaking innovation. Our starting point is SLCS, the Spatial Logic for Closure Spaces -- Closure Spaces being a generalisation of topological spaces, covering also discrete space structures -- and topochecker, a model-checker for SLCS (and extensions thereof). We introduce the logical language ImgQL ("Image Query Language"). ImgQL extends SLCS with logical operators describing distance and region similarity. The spatio-temporal model checker topochecker is correspondingly enhanced with state-of-the-art algorithms, borrowed from computational image processing, for efficient implementation of distancebased operators, namely distance transforms. Similarity between regions is defined by means of a statistical similarity operator, based on notions from statistical texture analysis. We illustrate our approach by means of two examples of analysis of Magnetic Resonance images: segmentation of glioblastoma and its oedema, and segmentation of rectal carcinoma.

Gina Belmonte, Vincenzo Ciancia, Diego Latella et al.

Recent research on formal verification for Collective Adaptive Systems (CAS) pushed advancements in spatial and spatio-temporal model checking, and as a side result provided novel image analysis methodologies, rooted in logical methods for topological spaces. Medical Imaging (MI) is a field where such technologies show potential for ground-breaking innovation. In this position paper, we present a preliminary investigation centred on applications of spatial model checking to MI. The focus is shifted from pure logics to a mixture of logical, statistical and algorithmic approaches, driven by the logical nature intrinsic to the specification of the properties of interest in the field. As a result, novel operators are introduced, that could as well be brought back to the setting of CAS.