Ying Ming

Sirong Piao, Ying Ming, Ruijie Zhao et al.

To characterize lobar and segmental airway volume differences between systemic lupus erythematosus (SLE) patients with interstitial lung disease (ILD) and those without ILD (non-ILD) using a deep learning-based approach on non-contrast chest high-resolution CT (HRCT). Methods: A retrospective analysis was conducted on 106 SLE patients (27 SLE-ILD, 79 SLE-non-ILD) who underwent HRCT. A customized deep learning framework based on the U-Net architecture was developed to automatically segment airway structures at the lobar and segmental levels via HRCT. Volumetric measurements of lung lobes and segments derived from the segmentations were statistically compared between the two groups using two-sample t-tests (significance threshold: p < 0.05). Results: At lobar level, significant airway volume enlargement in SLE-ILD patients was observed in the right upper lobe (p=0.009) and left upper lobe (p=0.039) compared to SLE-non-ILD. At the segmental level, significant differences were found in segments including R1 (p=0.016), R3 (p<0.001), and L3 (p=0.038), with the most marked changes in the upper lung zones, while lower zones showed non-significant trends. Conclusion: Our study demonstrates that an automated deep learning-based approach can effectively quantify airway volumes on HRCT scans and reveal significant, region-specific airway dilation in patients with SLE-ILD compared to those without ILD. The pattern of involvement, predominantly affecting the upper lobes and specific segments, highlights a distinct topographic phenotype of SLE-ILD and implicates airway structural alterations as a potential biomarker for disease presence. This AI-powered quantitative imaging biomarker holds promise for enhancing the early detection and monitoring of ILD in the SLE population, ultimately contributing to more personalized patient management.

Ying Ming, Yue Lin, Longfei Zhao et al.

Computed Tomography Pulmonary Angiography (CTPA) is the reference standard for diagnosing pulmonary vascular diseases such as Pulmonary Embolism (PE) and Chronic Thromboembolic Pulmonary Hypertension (CTEPH). However, its reliance on iodinated contrast agents poses risks including nephrotoxicity and allergic reactions, particularly in high-risk patients. This study proposes a method to generate Digital Contrast CTPA (DCCTPA) from Non-Contrast CT (NCCT) scans using a cascaded synthesizer based on Cycle-Consistent Generative Adversarial Networks (CycleGAN). Totally retrospective 410 paired CTPA and NCCT scans were obtained from three centers. The model was trained and validated internally on 249 paired images. Extra dataset that comprising 161 paired images was as test set for model generalization evaluation and downstream clinical tasks validation. Compared with state-of-the-art (SOTA) methods, the proposed method achieved the best comprehensive performance by evaluating quantitative metrics (For validation, MAE: 156.28, PSNR: 20.71 and SSIM: 0.98; For test, MAE: 165.12, PSNR: 20.27 and SSIM: 0.98) and qualitative visualization, demonstrating valid vessel enhancement, superior image fidelity and structural preservation. The approach was further applied to downstream tasks of pulmonary vessel segmentation and vascular quantification. On the test set, the average Dice, clDice, and clRecall of artery and vein pulmonary segmentation was 0.70, 0.71, 0.73 and 0.70, 0.72, 0.75 respectively, all markedly improved compared with NCCT inputs.\@ Inter-class Correlation Coefficient (ICC) for vessel volume between DCCTPA and CTPA was significantly better than that between NCCT and CTPA (Average ICC : 0.81 vs 0.70), indicating effective vascular enhancement in DCCTPA, especially for small vessels.

Ruijie Zhao, Zuopeng Tan, Xiao Xue et al.

Pulmonary segment segmentation is crucial for cancer localization and surgical planning. However, the pixel-wise annotation of pulmonary segments is laborious, as the boundaries between segments are indistinguishable in medical images. To this end, we propose a weakly supervised learning (WSL) method, termed Anatomy-Hierarchy Supervised Learning (AHSL), which consults the precise clinical anatomical definition of pulmonary segments to perform pulmonary segment segmentation. Since pulmonary segments reside within the lobes and are determined by the bronchovascular tree, i.e., artery, airway and vein, the design of the loss function is founded on two principles. First, segment-level labels are utilized to directly supervise the output of the pulmonary segments, ensuring that they accurately encompass the appropriate bronchovascular tree. Second, lobe-level supervision indirectly oversees the pulmonary segment, ensuring their inclusion within the corresponding lobe. Besides, we introduce a two-stage segmentation strategy that incorporates bronchovascular priori information. Furthermore, a consistency loss is proposed to enhance the smoothness of segment boundaries, along with an evaluation metric designed to measure the smoothness of pulmonary segment boundaries. Visual inspection and evaluation metrics from experiments conducted on a private dataset demonstrate the effectiveness of our method.

Ying Ming, Shaoze Luo, Longfei Zhao et al.

Accurate segmentation of pulmonary vessels plays a very critical role in diagnosing and assessing various lung diseases. Currently, many automated algorithms are primarily targeted at CTPA (Computed Tomography Pulmonary Angiography) types of data. However, the segmentation precision of these methods is insufficient, and support for NCCT (Non-Contrast Computed Tomography) types of data is also a requirement in some clinical scenarios. In this study, we propose a 3D image segmentation algorithm for automated pulmonary vessel segmentation from both contrast-enhanced and non-contrast CT images. In the network, we designed a Vessel Lumen Structure Optimization Module (VLSOM), which extracts the centerline (Cl) of vessels and adjusts the weights based on the positional information and adds a Cl-Dice Loss to supervise the stability of the vessels structure. We used 427 sets of high-precision annotated CT data from multiple vendors and countries to train the model and achieved Cl-DICE, Cl-Recall, and Recall values of 0.892, 0.861, 0.924 for CTPA data and 0.925, 0.903, 0.949 for NCCT data. This shows that our model has achieved good performance in both accuracy and completeness of pulmonary vessel segmentation. We finally conducted a clinical visual assessment on an independent external test dataset. The average score for accuracy and robustness, branch abundance, assistance for diagnosis and vascular continuity are 4.26, 4.17, 4.33, 3.83 respectively while the full score is 5. These results highlight the great potential of this method in clinical application.