Mohamed G. Embaby

Taminul Islam, Toqi Tahamid Sarker, Mohamed Embaby et al.

Ruminal acidosis is a prevalent metabolic disorder in dairy cattle causing significant economic losses and animal welfare concerns. Current diagnostic methods rely on invasive pH measurement, limiting scalability for continuous monitoring. We present FUME (Fused Unified Multi-gas Emission Network), the first deep learning approach for rumen acidosis detection from dual-gas optical imaging under in vitro conditions. Our method leverages complementary carbon dioxide (CO2) and methane (CH4) emission patterns captured by infrared cameras to classify rumen health into Healthy, Transitional, and Acidotic states. FUME employs a lightweight dual-stream architecture with weight-shared encoders, modality-specific self-attention, and channel attention fusion, jointly optimizing gas plume segmentation and classification of dairy cattle health. We introduce the first dual-gas OGI dataset comprising 8,967 annotated frames across six pH levels with pixel-level segmentation masks. Experiments demonstrate that FUME achieves 80.99% mIoU and 98.82% classification accuracy while using only 1.28M parameters and 1.97G MACs--outperforming state-of-the-art methods in segmentation quality with 10x lower computational cost. Ablation studies reveal that CO2 provides the primary discriminative signal and dual-task learning is essential for optimal performance. Our work establishes the feasibility of gas emission-based livestock health monitoring, paving the way for practical, in vitro acidosis detection systems. Codes are available at https://github.com/taminulislam/fume.

Toqi Tahamid Sarker, Mohamed G Embaby, Khaled R Ahmed et al.

Methane emissions from livestock, particularly cattle, significantly contribute to climate change. Effective methane emission mitigation strategies are crucial as the global population and demand for livestock products increase. We introduce Gasformer, a novel semantic segmentation architecture for detecting low-flow rate methane emissions from livestock, and controlled release experiments using optical gas imaging. We present two unique datasets captured with a FLIR GF77 OGI camera. Gasformer leverages a Mix Vision Transformer encoder and a Light-Ham decoder to generate multi-scale features and refine segmentation maps. Gasformer outperforms other state-of-the-art models on both datasets, demonstrating its effectiveness in detecting and segmenting methane plumes in controlled and real-world scenarios. On the livestock dataset, Gasformer achieves mIoU of 88.56%, surpassing other state-of-the-art models. Materials are available at: github.com/toqitahamid/Gasformer.

Toqi Tahamid Sarker, Mohamed Embaby, Taminul Islam et al.

Livestock methane emissions represent 32% of human-caused methane production, making automated monitoring critical for climate mitigation strategies. We introduce GasTwinFormer, a hybrid vision transformer for real-time methane emission segmentation and dietary classification in optical gas imaging through a novel Mix Twin encoder alternating between spatially-reduced global attention and locally-grouped attention mechanisms. Our architecture incorporates a lightweight LR-ASPP decoder for multi-scale feature aggregation and enables simultaneous methane segmentation and dietary classification in a unified framework. We contribute the first comprehensive beef cattle methane emission dataset using OGI, containing 11,694 annotated frames across three dietary treatments. GasTwinFormer achieves 74.47% mIoU and 83.63% mF1 for segmentation while maintaining exceptional efficiency with only 3.348M parameters, 3.428G FLOPs, and 114.9 FPS inference speed. Additionally, our method achieves perfect dietary classification accuracy (100%), demonstrating the effectiveness of leveraging diet-emission correlations. Extensive ablation studies validate each architectural component, establishing GasTwinFormer as a practical solution for real-time livestock emission monitoring. Please see our project page at gastwinformer.github.io.

Taminul Islam, Toqi Tahamid Sarker, Mohamed G Embaby et al.

Carbon dioxide (CO$_2$) emissions are critical indicators of both environmental impact and various industrial processes, including livestock management. We introduce CarboFormer, a lightweight semantic segmentation framework for Optical Gas Imaging (OGI), designed to detect and quantify CO$_2$ emissions across diverse applications. Our approach integrates an optimized encoder-decoder architecture with specialized multi-scale feature fusion and auxiliary supervision strategies to effectively model both local details and global relationships in gas plume imagery while achieving competitive accuracy with minimal computational overhead for resource-constrained environments. We contribute two novel datasets: (1) the Controlled Carbon Dioxide Release (CCR) dataset, which simulates gas leaks with systematically varied flow rates (10-100 SCCM), and (2) the Real Time Ankom (RTA) dataset, focusing on emissions from dairy cow rumen fluid in vitro experiments. Extensive evaluations demonstrate that CarboFormer achieves competitive performance with 84.88\% mIoU on CCR and 92.98\% mIoU on RTA, while maintaining computational efficiency with only 5.07M parameters and operating at 84.68 FPS. The model shows particular effectiveness in challenging low-flow scenarios and significantly outperforms other lightweight methods like SegFormer-B0 (83.36\% mIoU on CCR) and SegNeXt (82.55\% mIoU on CCR), making it suitable for real-time monitoring on resource-constrained platforms such as programmable drones. Our work advances both environmental sensing and precision livestock management by providing robust and efficient tools for CO$_2$ emission analysis.