Stephanie Eckman

Hyeong Kyu Choi, Weijie Xu, Chi Xue et al. · amazon-science

Large language models (LLMs) often exhibit systematic preferences for certain answer choices when responding to multiple-choice questions-a behavior known as selection bias. This bias reduces the accuracy and reliability of LLM outputs, limiting their usefulness in decision-critical applications. While prior work has focused on adjusting model inputs or outputs to mitigate this issue, our work takes a fundamentally different approach by identifying and removing the internal sources of bias. We introduce two methods: Bias Node Pruning (BNP), which prunes parameters that contribute to selection bias, and Auxiliary Option Injection (AOI), which introduces an additional answer choice to reduce bias in both white-box and black-box settings. To address the shortcomings of existing evaluation metrics, we propose Choice Kullback-Leibler Divergence (CKLD), a new metric that captures distributional imbalances in model predictions. Experiments on three LLMs across multiple datasets demonstrate that our methods consistently improve answer accuracy while reducing selection bias, providing a robust solution for both open- and closed-source models.

Christoph Kern, Stephanie Eckman, Jacob Beck et al.

When training data are collected from human annotators, the design of the annotation instrument, the instructions given to annotators, the characteristics of the annotators, and their interactions can impact training data. This study demonstrates that design choices made when creating an annotation instrument also impact the models trained on the resulting annotations. We introduce the term annotation sensitivity to refer to the impact of annotation data collection methods on the annotations themselves and on downstream model performance and predictions. We collect annotations of hate speech and offensive language in five experimental conditions of an annotation instrument, randomly assigning annotators to conditions. We then fine-tune BERT models on each of the five resulting datasets and evaluate model performance on a holdout portion of each condition. We find considerable differences between the conditions for 1) the share of hate speech/offensive language annotations, 2) model performance, 3) model predictions, and 4) model learning curves. Our results emphasize the crucial role played by the annotation instrument which has received little attention in the machine learning literature. We call for additional research into how and why the instrument impacts the annotations to inform the development of best practices in instrument design.

Robert Chew, Stephanie Eckman, Christoph Kern et al.

Supervised machine learning assumes that labeled data provide accurate measurements of the concepts models are meant to learn. Yet in practice, human labeling introduces systematic variation arising from ambiguous items, divergent interpretations, and simple mistakes. Machine learning research commonly treats all disagreement as noise, which obscures these distinctions and limits our understanding of what models actually learn. This paper reframes annotation as a measurement process and introduces a statistical framework for decomposing labeling outcomes into interpretable sources of variation: instance difficulty, annotator bias, situational noise, and relational alignment. The framework extends classical measurement-error models to accommodate both shared and individualized notions of truth, reflecting traditional and human label variation interpretations of error, and provides a diagnostic for assessing which regime better characterizes a given task. Applying the proposed model to a multi-annotator natural language inference dataset, we find empirical evidence for all four theorized components and demonstrate the effectiveness of our approach. We conclude with implications for data-centric machine learning and outline how this approach can guide the development of a more systematic science of labeling.

Weijie Xu, Shixian Cui, Xi Fang et al. · amazon-science

Large language models (LLMs) are increasingly evaluated on single-answer multiple-choice tasks, yet many real-world problems require identifying all correct answers from a set of options. This capability remains underexplored. We introduce SATA-BENCH, the first dedicated benchmark for evaluating LLMs on Select All That Apply (SATA) questions across diverse domains, including reading comprehension, law, and biomedicine. Our evaluation of 27 open-source and proprietary models reveals a significant gap: even the strongest model achieves only 41.8% exact match, exposing LLMs' inability to reliably identify all correct answers. We find that this weakness stems from two core challenges: selection bias - models favor certain choices regardless of content, and count bias - models fail to predict the correct number of answers. To address these issues, we propose Choice Funnel, a decoding strategy that combines token debiasing with adaptive thresholding to guide models toward complete and accurate selections. Choice Funnel achieves up to 29% higher exact match than competitive baselines while reducing inference cost by over 64%. Our findings expose fundamental limitations in current LLMs and introduce a new framework for diagnosing and improving multi-answer reasoning. We release SATA-BENCH and Choice Funnel to promote LLM development for robust decision-making in realistic, multi-answer applications.