Fei Gao

Jinhui Yuan, Fei Gao, Qirong Ho et al.

When building large-scale machine learning (ML) programs, such as big topic models or deep neural nets, one usually assumes such tasks can only be attempted with industrial-sized clusters with thousands of nodes, which are out of reach for most practitioners or academic researchers. We consider this challenge in the context of topic modeling on web-scale corpora, and show that with a modest cluster of as few as 8 machines, we can train a topic model with 1 million topics and a 1-million-word vocabulary (for a total of 1 trillion parameters), on a document collection with 200 billion tokens -- a scale not yet reported even with thousands of machines. Our major contributions include: 1) a new, highly efficient O(1) Metropolis-Hastings sampling algorithm, whose running cost is (surprisingly) agnostic of model size, and empirically converges nearly an order of magnitude faster than current state-of-the-art Gibbs samplers; 2) a structure-aware model-parallel scheme, which leverages dependencies within the topic model, yielding a sampling strategy that is frugal on machine memory and network communication; 3) a differential data-structure for model storage, which uses separate data structures for high- and low-frequency words to allow extremely large models to fit in memory, while maintaining high inference speed; and 4) a bounded asynchronous data-parallel scheme, which allows efficient distributed processing of massive data via a parameter server. Our distribution strategy is an instance of the model-and-data-parallel programming model underlying the Petuum framework for general distributed ML, and was implemented on top of the Petuum open-source system. We provide experimental evidence showing how this development puts massive models within reach on a small cluster while still enjoying proportional time cost reductions with increasing cluster size, in comparison with alternative options.

Linqing Chen, Weilei Wang, Zilong Bai et al.

Large language models (LLMs) have revolutionized Natural Language Processing (NLP) by minimizing the need for complex feature engineering. However, the application of LLMs in specialized domains like biopharmaceuticals and chemistry remains largely unexplored. These fields are characterized by intricate terminologies, specialized knowledge, and a high demand for precision areas where general purpose LLMs often fall short. In this study, we introduce PharmaGPT, a suite of domain specilized LLMs with 13 billion and 70 billion parameters, specifically trained on a comprehensive corpus tailored to the Bio-Pharmaceutical and Chemical domains. Our evaluation shows that PharmaGPT surpasses existing general models on specific-domain benchmarks such as NAPLEX, demonstrating its exceptional capability in domain-specific tasks. Remarkably, this performance is achieved with a model that has only a fraction, sometimes just one-tenth-of the parameters of general-purpose large models. This advancement establishes a new benchmark for LLMs in the bio-pharmaceutical and chemical fields, addressing the existing gap in specialized language modeling. It also suggests a promising path for enhanced research and development, paving the way for more precise and effective NLP applications in these areas.

Fei Gao, Siwen Wang, Fandong Zhang et al.

Medical image analysis suffers from a shortage of data, whether annotated or not. This becomes even more pronounced when it comes to 3D medical images. Self-Supervised Learning (SSL) can partially ease this situation by using unlabeled data. However, most existing SSL methods can only make use of data in a single dimensionality (e.g. 2D or 3D), and are incapable of enlarging the training dataset by using data with differing dimensionalities jointly. In this paper, we propose a new cross-dimensional SSL framework based on a pseudo-3D transformation (CDSSL-P3D), that can leverage both 2D and 3D data for joint pre-training. Specifically, we introduce an image transformation based on the im2col algorithm, which converts 2D images into a format consistent with 3D data. This transformation enables seamless integration of 2D and 3D data, and facilitates cross-dimensional self-supervised learning for 3D medical image analysis. We run extensive experiments on 13 downstream tasks, including 2D and 3D classification and segmentation. The results indicate that our CDSSL-P3D achieves superior performance, outperforming other advanced SSL methods.

Sheng-Yao Wu, Run-Ze Li, Yan-Qi Song et al.

Neural network is a powerful learning paradigm for data feature learning in the era of big data. However, most neural network models are deterministic models that ignore the uncertainty of data. Fuzzy neural networks are proposed to address this problem. FDNN is a hierarchical deep neural network that derives information from both fuzzy and neural representations, the representations are then fused to form representation to be classified. FDNN perform well on uncertain data classification tasks. In this paper, we proposed a novel hierarchical fused quantum fuzzy neural network (HQFNN). Different from classical FDNN, HQFNN uses quantum neural networks to learn fuzzy membership functions in fuzzy neural network. We conducted simulated experiment on two types of datasets (Dirty-MNIST and 15-Scene), the results show that the proposed model can outperform several existing methods. In addition, we demonstrate the robustness of the proposed quantum circuit.

Yishan He, Fei Gao, Jun Wang et al.

Common horizontal bounding box (HBB)-based methods are not capable of accurately locating slender ship targets with arbitrary orientations in synthetic aperture radar (SAR) images. Therefore, in recent years, methods based on oriented bounding box (OBB) have gradually received attention from researchers. However, most of the recently proposed deep learning-based methods for OBB detection encounter the boundary discontinuity problem in angle or key point regression. In order to alleviate this problem, researchers propose to introduce some manually set parameters or extra network branches for distinguishing the boundary cases, which make training more diffcult and lead to performance degradation. In this paper, in order to solve the boundary discontinuity problem in OBB regression, we propose to detect SAR ships by learning polar encodings. The encoding scheme uses a group of vectors pointing from the center of the ship target to the boundary points to represent an OBB. The boundary discontinuity problem is avoided by training and inference directly according to the polar encodings. In addition, we propose an Intersect over Union (IOU) -weighted regression loss, which further guides the training of polar encodings through the IOU metric and improves the detection performance. Experiments on the Rotating SAR Ship Detection Dataset (RSSDD) show that the proposed method can achieve better detection performance over other comparison algorithms and other OBB encoding schemes, demonstrating the effectiveness of our method.