Boyu Ren

WonJin Yoon, Boyu Ren, Spencer Thomas et al. · harvard

Recent progress in large language models (LLMs) has enabled the automated processing of lengthy documents even without supervised training on a task-specific dataset. Yet, their zero-shot performance in complex tasks as opposed to straightforward information extraction tasks remains suboptimal. One feasible approach for tasks with lengthy, complex input is to first summarize the document and then apply supervised fine-tuning to the summary. However, the summarization process inevitably results in some loss of information. In this study we present a method for processing the summaries of long documents aimed to capture different important aspects of the original document. We hypothesize that LLM summaries generated with different aspect-oriented prompts contain different information signals, and we propose methods to measure these differences. We introduce approaches to effectively integrate signals from these different summaries for supervised training of transformer models. We validate our hypotheses on a high-impact task -- 30-day readmission prediction from a psychiatric discharge -- using real-world data from four hospitals, and show that our proposed method increases the prediction performance for the complex task of predicting patient outcome.

Yujie Wu, Giovanni Parmigiani, Boyu Ren

Multi-source domain adaptation (DA) aims at leveraging information from more than one source domain to make predictions in a target domain, where different domains may have different data distributions. Most existing methods for multi-source DA focus on classification problems while there is only limited investigation in the regression settings. In this paper, we fill in this gap through a two-step procedure. First, we extend a flexible single-source DA algorithm for classification through outcome-coarsening to enable its application to regression problems. We then augment our single-source DA algorithm for regression with ensemble learning to achieve multi-source DA. We consider three learning paradigms in the ensemble algorithm, which combines linearly the target-adapted learners trained with each source domain: (i) a multi-source stacking algorithm to obtain the ensemble weights; (ii) a similarity-based weighting where the weights reflect the quality of DA of each target-adapted learner; and (iii) a combination of the stacking and similarity weights. We illustrate the performance of our algorithms with simulations and a data application where the goal is to predict High-density lipoprotein (HDL) cholesterol levels using gut microbiome. We observe a consistent improvement in prediction performance of our multi-source DA algorithm over the routinely used methods in all these scenarios.